Mon May 6 15:31:00 UTC 2024 I: starting to build votca/unstable/amd64 on jenkins on '2024-05-06 15:30' Mon May 6 15:31:00 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_10/5252/console.log Mon May 6 15:31:00 UTC 2024 I: Downloading source for unstable/votca=2024-2 --2024-05-06 15:31:00-- http://deb.debian.org/debian/pool/main/v/votca/votca_2024-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2720 (2.7K) [text/prs.lines.tag] Saving to: ‘votca_2024-2.dsc’ 0K .. 100% 359M=0s 2024-05-06 15:31:00 (359 MB/s) - ‘votca_2024-2.dsc’ saved [2720/2720] Mon May 6 15:31:00 UTC 2024 I: votca_2024-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: votca Binary: libvotca-dev, libvotca-2024, votca-data, votca-tutorials, votca Architecture: any all Version: 2024-2 Maintainer: Debichem Team Uploaders: Michael Banck , Nicholas Breen Homepage: https://www.votca.org/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/debichem-team/votca Vcs-Git: https://salsa.debian.org/debichem-team/votca.git Build-Depends: bash-completion, clang-format, cmake, debhelper-compat (= 13), dh-python, gromacs (>= 2024~), libboost-all-dev, libecpint-dev, libeigen3-dev, libexpat-dev, libfftw3-dev, libgromacs-dev (>= 2024~), libgsl-dev, libhdf5-dev, libint2-dev, librdkit-dev, libsqlite3-dev, libxc-dev, pkgconf, pybind11-dev, python3-h5py, python3-lxml, python3-numpy, python3-pytest, python3-rdkit, python3:any, sphinx-common, txt2tags Build-Depends-Indep: doxygen, gnuplot-nox | gnuplot, graphviz, pandoc, python3-ipykernel, python3-nbsphinx, python3-recommonmark, python3-sphinx, python3-sphinx-rtd-theme Package-List: libvotca-2024 deb libs optional arch=any libvotca-dev deb libdevel optional arch=any votca deb science optional arch=any votca-data deb science optional arch=all votca-tutorials deb science optional arch=all Checksums-Sha1: 50eaa7c493321e490a56523516c85071c33c6bad 38972469 votca_2024.orig.tar.gz 4545ae8493602594d1c8a2a56aea5132483a76c4 205776 votca_2024-2.debian.tar.xz Checksums-Sha256: 7f342e857f4a6ba6d25937f63830afa3c32cbd906255c8d78aa6c500cfd418c8 38972469 votca_2024.orig.tar.gz 0fb905d75730ced6c6716895734d54735e6d851453cc501cd425bf486219b7f5 205776 votca_2024-2.debian.tar.xz Files: 22159d4370cdba8a54d6a1f3e6a2df13 38972469 votca_2024.orig.tar.gz d6f83af8660583a3270ae6327fab38c4 205776 votca_2024-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEhD5fph5gYziYdtLl7kr9aexlEI8FAmXgAb4SHG5icmVlbkBk ZWJpYW4ub3JnAAoJEO5K/WnsZRCP4xQP/3chAo7HXogIp5WNjkiZE63z7C5YhdAe +EfB7Sp+4wYvszuvWBvo7N6QN5ZneBZBRNQjAZo5ZmR1BqtG1ONNTqWIqwvArTuo 5dkE1DjZBcSNsnbayyh3Y/M1ItirN/jFdgdWlS1OknwJsFoIT+9LfmCUH02NyPQW zGhp4O/1bO3pSCTdtFOpxe8HjFXT65UB2uAgekfxKHVeTYlJNDZASui5cyCoZvcu jpSHeR3t6XW6SNI7ruC/rRc5ZQm0xpnyKgjNvgtT1GKJ3oWBLtt9JEpt3gWcz2lj g4mnZn/hBUk5qyCPex6nayEmYC7CsG6sFlf/RySnfcNEget2/7vDZtmoWgBZMQIZ T65jnWWAt2BYvmABYnS0syeCz/+tN33geAnD8ewCTBIeYUZeqQU+4zBxhh7MiQkU xWWWGuC7owvG1TiEnFSBz7nVBQ0zAmIac/wVbcfcPDBHi3QJPHzEjP2/W4wU/Zhf pR+WbYX4PdU52Pbd5Z/kkQh7/Xa+MlZbJFl020WwypNFXRlztlsu+tqVZVGybYJS h9Kzd+SdsitlRrWEmNdSbg3Y1ZUXgUw1QKNnJ5TvTEYtoeRwOQ9sQady6pZgIM3/ sUof1QJHgHclejQ1nP2UXOrYQzYq0jbBEOgPGit1R03cySzhAn2tDCqH92MQtMRv rD2+YOf5C+e4 =LURd -----END PGP SIGNATURE----- Mon May 6 15:31:00 UTC 2024 I: Checking whether the package is not for us Mon May 6 15:31:00 UTC 2024 I: Starting 1st build on remote node ionos5-amd64.debian.net. Mon May 6 15:31:00 UTC 2024 I: Preparing to do remote build '1' on ionos5-amd64.debian.net. Mon May 6 15:45:00 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jun 8 09:54:03 -12 2025 I: pbuilder-time-stamp: 1749419643 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [votca_2024-2.dsc] I: copying [./votca_2024.orig.tar.gz] I: copying [./votca_2024-2.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Feb 29 04:02:06 2024 gpgv: using RSA key 843E5FA61E6063389876D2E5EE4AFD69EC65108F gpgv: issuer "nbreen@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./votca_2024-2.dsc: no acceptable signature found dpkg-source: info: extracting votca in votca-2024 dpkg-source: info: unpacking votca_2024.orig.tar.gz dpkg-source: info: unpacking votca_2024-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying rtd-theme-js-beautify.patch dpkg-source: info: applying sphinx-7-styles.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1102727/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e24771a4f789408d82c4868df45b1811' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1102727' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.GJAzBulJ/pbuilderrc_DX1p --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.GJAzBulJ/b1 --logfile b1/build.log votca_2024-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos5-amd64 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 7 14:06 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1102727/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: bash-completion, clang-format, cmake, debhelper-compat (= 13), dh-python, gromacs (>= 2024~), libboost-all-dev, libecpint-dev, libeigen3-dev, libexpat-dev, libfftw3-dev, libgromacs-dev (>= 2024~), libgsl-dev, libhdf5-dev, libint2-dev, librdkit-dev, libsqlite3-dev, libxc-dev, pkgconf, pybind11-dev, python3-h5py, python3-lxml, python3-numpy, python3-pytest, python3-rdkit, python3:any, sphinx-common, txt2tags, doxygen, gnuplot-nox | gnuplot, graphviz, pandoc, python3-ipykernel, python3-nbsphinx, python3-recommonmark, python3-sphinx, python3-sphinx-rtd-theme dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19699 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on clang-format; however: Package clang-format is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on gromacs (>= 2024~); however: Package gromacs is not installed. pbuilder-satisfydepends-dummy depends on libboost-all-dev; however: Package libboost-all-dev is not installed. pbuilder-satisfydepends-dummy depends on libecpint-dev; however: Package libecpint-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libexpat-dev; however: Package libexpat-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgromacs-dev (>= 2024~); however: Package libgromacs-dev is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libint2-dev; however: Package libint2-dev is not installed. pbuilder-satisfydepends-dummy depends on librdkit-dev; however: Package librdkit-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libxc-dev; however: Package libxc-dev is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. pbuilder-satisfydepends-dummy depends on pybind11-dev; however: Package pybind11-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-lxml; however: Package python3-lxml is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-rdkit; however: Package python3-rdkit is not installed. pbuilder-satisfydepends-dummy depends on python3:any. pbuilder-satisfydepends-dummy depends on sphinx-common; however: Package sphinx-common is not installed. pbuilder-satisfydepends-dummy depends on txt2tags; however: Package txt2tags is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on gnuplot-nox | gnuplot; however: Package gnuplot-nox is not installed. Package gnuplot is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on pandoc; however: Package pandoc is not installed. pbuilder-satisfydepends-dummy depends on python3-ipykernel; however: Package python3-ipykernel is not installed. pbuilder-satisfydepends-dummy depends on python3-nbsphinx; however: Package python3-nbsphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-recommonmark; however: Package python3-recommonmark is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-rtd-theme; however: Package python3-sphinx-rtd-theme is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: aglfn{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} bsdextrautils{a} ca-certificates{a} clang-format{a} clang-format-16{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-freefont-ttf{a} fonts-lato{a} fonts-mathjax{a} gdb{a} gettext{a} gettext-base{a} gfortran-13{a} gfortran-13-x86-64-linux-gnu{a} gnuplot-data{a} gnuplot-nox{a} graphviz{a} groff-base{a} gromacs{a} gromacs-data{a} hdf5-helpers{a} ibverbs-providers{a} icu-devtools{a} intltool-debian{a} isa-support{a} libabsl20230802{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libann0{a} libaom3{a} libarchive-zip-perl{a} libarchive13t64{a} libavif16{a} libbabeltrace1{a} libblas3{a} libboost-all-dev{a} libboost-atomic-dev{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-container-dev{a} libboost-container1.83-dev{a} libboost-container1.83.0{a} libboost-context-dev{a} libboost-context1.83-dev{a} libboost-context1.83.0{a} libboost-coroutine-dev{a} libboost-coroutine1.83-dev{a} libboost-coroutine1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-exception-dev{a} libboost-exception1.83-dev{a} libboost-fiber-dev{a} libboost-fiber1.83-dev{a} libboost-fiber1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-graph-dev{a} libboost-graph-parallel-dev{a} libboost-graph-parallel1.83-dev{a} libboost-graph-parallel1.83.0{a} libboost-graph1.83-dev{a} libboost-graph1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-json-dev{a} libboost-json1.83-dev{a} libboost-json1.83.0{a} libboost-locale-dev{a} libboost-locale1.83-dev{a} libboost-locale1.83.0{a} libboost-log-dev{a} libboost-log1.83-dev{a} libboost-log1.83.0{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi-python-dev{a} libboost-mpi-python1.83-dev{a} libboost-mpi-python1.83.0{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-nowide-dev{a} libboost-nowide1.83-dev{a} libboost-nowide1.83.0{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-random-dev{a} libboost-random1.83-dev{a} libboost-random1.83.0{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-stacktrace-dev{a} libboost-stacktrace1.83-dev{a} libboost-stacktrace1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-test-dev{a} libboost-test1.83-dev{a} libboost-test1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost-tools-dev{a} libboost-type-erasure-dev{a} libboost-type-erasure1.83-dev{a} libboost-type-erasure1.83.0{a} libboost-url-dev{a} libboost-url1.83-dev{a} libboost-url1.83.0{a} libboost-wave-dev{a} libboost-wave1.83-dev{a} libboost-wave1.83.0{a} libboost1.83-dev{a} libboost1.83-tools-dev{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcbor0.10{a} libcdt5{a} libcgraph6{a} libclang-cpp16t64{a} libclang1-16t64{a} libcom-err2{a} libcoordgen3{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} 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libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libibverbs-dev{a} libibverbs1{a} libice6{a} libicu-dev{a} libicu72{a} libint2-2t64{a} libint2-dev{a} libipt2{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} libllvm16t64{a} libllvm17t64{a} libltdl-dev{a} libltdl7{a} liblua5.4-0{a} liblzf1{a} libmaeparser1{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libmuparser2v5{a} libnghttp2-14{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnorm1t64{a} libnuma-dev{a} libnuma1{a} libopenmpi-dev{a} libopenmpi3t64{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpciaccess0{a} libpgm-5.3-0t64{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpmix-dev{a} libpmix2t64{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} librav1e0{a} librdkit-dev{a} librdkit1{a} librdmacm1t64{a} libreadline8t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libsodium23{a} libsource-highlight-common{a} libsource-highlight4t64{a} libsqlite3-dev{a} libssh2-1t64{a} libssl-dev{a} libsub-override-perl{a} libsvtav1enc1d1{a} libsz2{a} libthai-data{a} libthai0{a} libtiff6{a} libtool{a} libuchardet0{a} libucx0{a} libuv1t64{a} libwebp7{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxc-dev{a} libxc9{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxmu6{a} libxnvctrl0{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxt6t64{a} libyaml-0-2{a} libyuv0{a} libz3-4{a} libzmq5{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} openssl{a} pandoc{a} pandoc-data{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybind11-dev{a} python-babel-localedata{a} python-tinycss2-common{a} python3{a} python3-alabaster{a} python3-asttokens{a} python3-attr{a} python3-babel{a} python3-bleach{a} python3-bs4{a} python3-bytecode{a} python3-certifi{a} python3-cffi-backend{a} python3-chardet{a} python3-charset-normalizer{a} python3-comm{a} python3-commonmark{a} python3-coverage{a} python3-dateutil{a} python3-debugpy{a} python3-decorator{a} python3-defusedxml{a} python3-dev{a} python3-distutils{a} python3-docutils{a} python3-entrypoints{a} python3-executing{a} python3-fastjsonschema{a} python3-h5py{a} python3-h5py-serial{a} python3-hatch-vcs{a} python3-hatchling{a} python3-html5lib{a} python3-idna{a} python3-imagesize{a} python3-iniconfig{a} python3-ipykernel{a} python3-ipython{a} python3-jedi{a} python3-jinja2{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-jupyter-client{a} python3-jupyter-core{a} python3-jupyterlab-pygments{a} python3-lib2to3{a} python3-lxml{a} python3-lxml-html-clean{a} python3-markupsafe{a} python3-matplotlib-inline{a} python3-minimal{a} python3-nbclient{a} python3-nbconvert{a} python3-nbformat{a} python3-nbsphinx{a} python3-nest-asyncio{a} python3-numpy{a} python3-packaging{a} python3-pandocfilters{a} python3-parso{a} python3-pathspec{a} python3-pexpect{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-prompt-toolkit{a} python3-psutil{a} python3-ptyprocess{a} python3-pure-eval{a} python3-py{a} python3-pydevd{a} python3-pygments{a} python3-pytest{a} python3-rdkit{a} python3-recommonmark{a} python3-referencing{a} python3-requests{a} python3-roman{a} python3-rpds-py{a} python3-setuptools{a} python3-setuptools-scm{a} python3-six{a} python3-snowballstemmer{a} python3-soupsieve{a} python3-sphinx{a} python3-sphinx-rtd-theme{a} python3-sphinxcontrib.jquery{a} python3-stack-data{a} python3-tinycss2{a} python3-tornado{a} python3-traitlets{a} python3-trove-classifiers{a} python3-typeshed{a} python3-typing-extensions{a} python3-urllib3{a} python3-wcwidth{a} python3-webencodings{a} python3-zmq{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} rdkit-data{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} sphinx-rtd-theme-common{a} sse4.2-support{a} txt2tags{a} tzdata{a} ucf{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl fonts-liberation fonts-liberation2 groff javascript-common krb5-locales libarchive-cpio-perl libc6-dbg libcoarrays-openmpi-dev libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libjson-xs-perl libldap-common libmail-sendmail-perl libpaper-utils libsasl2-modules lynx psmisc publicsuffix python3-cssselect python3-json-pointer python3-matplotlib python3-pandas python3-pil python3-rfc3987 python3-sphinxcontrib.bibtex python3-uritemplate python3-webcolors shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 497 newly installed, 0 to remove and 0 not upgraded. Need to get 482 MB of archives. After unpacking 2524 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 ucf all 3.0043+nmu1 [55.2 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 libdebuginfod-common all 0.191-1 [22.9 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 tzdata all 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http://deb.debian.org/debian unstable/main amd64 sse4.2-support amd64 21 [3408 B] Get: 23 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-4 [880 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 bash-completion all 1:2.13.0-1 [302 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.2.1-3 [1360 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40-8 [92.8 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20230828-1+b1 [93.5 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 libcbor0.10 amd64 0.10.2-1.2 [28.2 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 libfido2-1 amd64 1.14.0-1+b2 [77.7 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1~rc2-1 [22.6 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 45 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 openssh-client amd64 1:9.7p1-4 [965 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 aglfn all 1.7+git20191031.4036a9c-2 [30.5 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.71-3 [332 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.21-14 [496 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libllvm16t64 amd64 1:16.0.6-27 [23.1 MB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libclang-cpp16t64 amd64 1:16.0.6-27 [11.5 MB] Get: 59 http://deb.debian.org/debian unstable/main amd64 clang-format-16 amd64 1:16.0.6-27 [82.8 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 clang-format amd64 1:16.0-58.1 [5552 B] Get: 61 http://deb.debian.org/debian unstable/main amd64 libarchive13t64 amd64 3.7.2-2 [346 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.7.1-5 [441 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libuv1t64 amd64 1.48.0-1.1 [147 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 cmake-data all 3.29.2-2 [2167 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 cmake amd64 3.29.2-2 [10.7 MB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-7 [517 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 83 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 86 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.15.3 [901 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 python3-distutils all 3.12.3-1 [131 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20240422 [107 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 docutils-common all 0.20.1+dfsg-3 [128 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libclang1-16t64 amd64 1:16.0.6-27 [6581 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libfmt9 amd64 9.1.0+ds1-2 [113 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 doxygen amd64 1.9.8+ds-2+b1 [4913 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.43-5 [278 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b4 [439 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 fonts-freefont-ttf all 20211204+svn4273-2 [5318 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1 [463 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 libdw1t64 amd64 0.191-1+b1 [246 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.80.0-9 [1481 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 libbabeltrace1 amd64 1.5.11-3+b6 [176 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.7.1-5 [433 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 libdebuginfod1t64 amd64 0.191-1+b1 [28.5 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 libipt2 amd64 2.0.6-1 [43.2 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 libpython3.11t64 amd64 3.11.9-1 [1960 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 libsource-highlight-common all 3.1.9-4.3 [77.5 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 libsource-highlight4t64 amd64 3.1.9-4.3 [324 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 gdb amd64 13.2-1+b1 [3986 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14-20240429-1 [836 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 libgfortran-13-dev amd64 13.2.0-24 [847 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 gfortran-13-x86-64-linux-gnu amd64 13.2.0-24 [10.7 MB] Get: 122 http://deb.debian.org/debian unstable/main amd64 gfortran-13 amd64 13.2.0-24 [12.2 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 gnuplot-data all 6.0.0+dfsg1-3 [72.3 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-1 [144 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-1 [114 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-1 [105 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.0-3+b1 [531 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libaom3 amd64 3.8.2-2 [1869 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libdav1d7 amd64 1.4.1-1 [547 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libabsl20230802 amd64 20230802.1-4 [464 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 libgav1-1 amd64 0.19.0-2+b1 [351 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 librav1e0 amd64 0.7.1-2 [900 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1 [113 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libsvtav1enc1d1 amd64 1.7.0+dfsg-2+b1 [2169 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libyuv0 amd64 0.0~git202401110.af6ac82-1 [169 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 libavif16 amd64 1.0.4-2 [106 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-dav1d amd64 1.17.6-1+b2 [9856 B] Get: 146 http://deb.debian.org/debian unstable/main amd64 libde265-0 amd64 1.0.15-1+b1 [187 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libheif-plugin-libde265 amd64 1.17.6-1+b2 [13.1 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libheif1 amd64 1.17.6-1+b2 [284 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.20-1 [46.0 kB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get: 151 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get: 152 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1 [311 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-4 [322 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libxpm4 amd64 1:3.5.17-1+b1 [56.1 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libgd3 amd64 2.3.3-9+b3 [125 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 liblua5.4-0 amd64 5.4.6-3+b1 [147 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.13-3+b1 [71.4 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 8.3.0-2+b1 [2214 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3 [37.7 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2 [49.1 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.52.2+ds-1 [218 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.52.2+ds-1 [48.1 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.52.2+ds-1 [35.0 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1 [123 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 gnuplot-nox amd64 6.0.0+dfsg1-3 [916 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libann0 amd64 1.1.2+doc-9+b1 [25.1 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 libcdt5 amd64 2.42.2-9+b1 [39.8 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libcgraph6 amd64 2.42.2-9+b1 [63.6 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libgts-0.7-5t64 amd64 0.7.6+darcs121130-5.2 [157 kB] Get: 172 http://deb.debian.org/debian unstable/main amd64 libltdl7 amd64 2.4.7-7+b1 [393 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libpathplan4 amd64 2.42.2-9+b1 [42.2 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libgvc6 amd64 2.42.2-9+b1 [682 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libgvpr2 amd64 2.42.2-9+b1 [189 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 liblab-gamut1 amd64 2.42.2-9+b1 [198 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.0.10-1+b1 [56.7 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.3-1+b1 [33.6 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libxt6t64 amd64 1:1.2.1-1.2 [187 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libxmu6 amd64 2:1.1.3-3+b2 [58.7 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 libxaw7 amd64 2:1.0.14-1+b2 [199 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 graphviz amd64 2.42.2-9+b1 [614 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 gromacs-data all 2024.1-1 [43.3 MB] Get: 186 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3 [148 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-1+b2 [779 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-1+b2 [806 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.10.0-1+b1 [161 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libmuparser2v5 amd64 2.3.4-1 [146 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [132 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [54.1 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3 [59.0 kB] Get: 195 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3 [181 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 50.0-2+b1 [61.7 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 50.0-2+b1 [342 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 199 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1 [21.9 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 50.0-2+b1 [70.2 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3+b1 [628 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4 [19.8 kB] Get: 204 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1 [13.8 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b1 [40.3 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.10.0-1+b1 [18.0 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.2-3 [652 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-12 [23.7 MB] Get: 210 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b1 [13.0 MB] Get: 211 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.120-2 [7688 B] Get: 212 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.120-2 [38.1 kB] Get: 213 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.120-2 [21.4 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 5.7.0-1 [60.7 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 5.7.1-2 [504 kB] Get: 216 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-3 [8760 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.16.0+ds-5 [1109 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 libopenmpi3t64 amd64 4.1.6-13.3 [2426 kB] Get: 219 http://deb.debian.org/debian unstable/main amd64 libgromacs9 amd64 2024.1-1+b1 [30.8 MB] Get: 220 http://deb.debian.org/debian unstable/main amd64 gromacs amd64 2024.1-1+b1 [61.0 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.10.10+repack-3.3 [23.4 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 icu-devtools amd64 72.1-4+b1 [208 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get: 225 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1 [21.0 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-2.1+b1 [10.6 MB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-2.1+b1 [234 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-2.1+b1 [235 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libboost-atomic-dev amd64 1.83.0.2+b2 [3904 B] Get: 230 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-2.1+b1 [239 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-2.1+b1 [244 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libboost-chrono-dev amd64 1.83.0.2+b2 [4224 B] Get: 233 http://deb.debian.org/debian unstable/main amd64 libboost-container1.83.0 amd64 1.83.0-2.1+b1 [259 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 libboost-container1.83-dev amd64 1.83.0-2.1+b1 [264 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 libboost-container-dev amd64 1.83.0.2+b2 [4072 B] Get: 236 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-2.1+b1 [230 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-2.1+b1 [332 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-2.1+b1 [372 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-2.1+b1 [239 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-2.1+b1 [230 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-2.1+b1 [231 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-2.1+b1 [269 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-2.1+b1 [277 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 libboost-context1.83.0 amd64 1.83.0-2.1+b1 [231 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 libboost-context1.83-dev amd64 1.83.0-2.1+b1 [232 kB] Get: 246 http://deb.debian.org/debian unstable/main amd64 libboost-context-dev amd64 1.83.0.2+b2 [3804 B] Get: 247 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine1.83.0 amd64 1.83.0-2.1+b1 [234 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine1.83-dev amd64 1.83.0-2.1+b1 [236 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 libboost-coroutine-dev amd64 1.83.0.2+b2 [3868 B] Get: 250 http://deb.debian.org/debian unstable/main amd64 libboost-date-time-dev amd64 1.83.0.2+b2 [3596 B] Get: 251 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 252 http://deb.debian.org/debian unstable/main amd64 libboost-exception1.83-dev amd64 1.83.0-2.1+b1 [230 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libboost-exception-dev amd64 1.83.0.2+b2 [3584 B] Get: 254 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-2.1+b1 [280 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-2.1+b1 [295 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 libboost-fiber1.83.0 amd64 1.83.0-2.1+b1 [253 kB] Get: 257 http://deb.debian.org/debian unstable/main amd64 libboost-fiber1.83-dev amd64 1.83.0-2.1+b1 [264 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 libboost-fiber-dev amd64 1.83.0.2+b2 [4028 B] Get: 259 http://deb.debian.org/debian unstable/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 260 http://deb.debian.org/debian unstable/main amd64 libboost-graph1.83.0 amd64 1.83.0-2.1+b1 [358 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83.0 amd64 1.83.0-2.1+b1 [325 kB] Get: 262 http://deb.debian.org/debian unstable/main amd64 libicu-dev amd64 72.1-4+b1 [10.4 MB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libboost-regex1.83-dev amd64 1.83.0-2.1+b1 [342 kB] Get: 264 http://deb.debian.org/debian unstable/main amd64 libboost-test1.83.0 amd64 1.83.0-2.1+b1 [466 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 libboost-test1.83-dev amd64 1.83.0-2.1+b1 [537 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 libboost-graph1.83-dev amd64 1.83.0-2.1+b1 [383 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 libboost-graph-dev amd64 1.83.0.2+b2 [3700 B] Get: 268 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83.0 amd64 1.83.0-2.1+b1 [271 kB] Get: 269 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel1.83.0 amd64 1.83.0-2.1+b1 [279 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel1.83-dev amd64 1.83.0-2.1+b1 [283 kB] Get: 271 http://deb.debian.org/debian unstable/main amd64 libboost-graph-parallel-dev amd64 1.83.0.2+b2 [3728 B] Get: 272 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-2.1+b1 [261 kB] Get: 273 http://deb.debian.org/debian unstable/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 274 http://deb.debian.org/debian unstable/main amd64 libboost-json1.83.0 amd64 1.83.0-2.1+b1 [354 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libboost-json1.83-dev amd64 1.83.0-2.1+b1 [369 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libboost-json-dev amd64 1.83.0.2+b2 [3704 B] Get: 277 http://deb.debian.org/debian unstable/main amd64 libboost-locale1.83.0 amd64 1.83.0-2.1+b1 [464 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 libboost-locale1.83-dev amd64 1.83.0-2.1+b1 [548 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libboost-locale-dev amd64 1.83.0.2+b2 [3924 B] Get: 280 http://deb.debian.org/debian unstable/main amd64 libboost-log1.83.0 amd64 1.83.0-2.1+b1 [700 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libboost-log1.83-dev amd64 1.83.0-2.1+b1 [870 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 libboost-log-dev amd64 1.83.0.2+b2 [3796 B] Get: 283 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83.0 amd64 1.83.0-2.1+b1 [506 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 libboost-math1.83-dev amd64 1.83.0-2.1+b1 [548 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 libboost-math-dev amd64 1.83.0.2+b2 [3796 B] Get: 286 http://deb.debian.org/debian unstable/main amd64 openmpi-common all 4.1.6-13.3 [169 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 libnl-3-dev amd64 3.7.0-0.3 [99.4 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-dev amd64 3.7.0-0.3 [199 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 libibverbs-dev amd64 50.0-2+b1 [642 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 libnuma-dev amd64 2.0.18-1 [36.2 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 libltdl-dev amd64 2.4.7-7+b1 [164 kB] Get: 292 http://deb.debian.org/debian unstable/main amd64 libhwloc-dev amd64 2.10.0-1+b1 [250 kB] Get: 293 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [181 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 libevent-extra-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [107 kB] Get: 295 http://deb.debian.org/debian unstable/main amd64 libevent-openssl-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [61.1 kB] Get: 296 http://deb.debian.org/debian unstable/main amd64 libevent-dev amd64 2.1.12-stable-8.1+b3 [305 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3.1 [918 kB] Get: 298 http://deb.debian.org/debian unstable/main amd64 libpmix-dev amd64 5.0.2-3 [3940 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 301 http://deb.debian.org/debian unstable/main amd64 openmpi-bin amd64 4.1.6-13.3 [226 kB] Get: 302 http://deb.debian.org/debian unstable/main amd64 libopenmpi-dev amd64 4.1.6-13.3 [972 kB] Get: 303 http://deb.debian.org/debian unstable/main amd64 mpi-default-dev amd64 1.15 [3152 B] Get: 304 http://deb.debian.org/debian unstable/main amd64 libboost-mpi1.83-dev amd64 1.83.0-2.1+b1 [289 kB] Get: 305 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-dev amd64 1.83.0.2+b2 [3680 B] Get: 306 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83.0 amd64 1.83.0-2.1+b1 [351 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 mpi-default-bin amd64 1.15 [2408 B] Get: 308 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python1.83.0 amd64 1.83.0-2.1+b1 [435 kB] Get: 309 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python1.83-dev amd64 1.83.0-2.1+b1 [239 kB] Get: 310 http://deb.debian.org/debian unstable/main amd64 libboost-mpi-python-dev amd64 1.83.0.2+b2 [3712 B] Get: 311 http://deb.debian.org/debian unstable/main amd64 libboost-nowide1.83.0 amd64 1.83.0-2.1+b1 [234 kB] Get: 312 http://deb.debian.org/debian unstable/main amd64 libboost-nowide1.83-dev amd64 1.83.0-2.1+b1 [236 kB] Get: 313 http://deb.debian.org/debian unstable/main amd64 libboost-nowide-dev amd64 1.83.0.2+b2 [3668 B] Get: 314 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83.0 amd64 1.83.0-2.1+b1 [248 kB] Get: 315 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83-dev amd64 1.83.0-2.1+b1 [253 kB] Get: 316 http://deb.debian.org/debian unstable/main amd64 libboost-numpy-dev amd64 1.83.0.2+b2 [3644 B] Get: 317 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83.0 amd64 1.83.0-2.1+b1 [345 kB] Get: 318 http://deb.debian.org/debian unstable/main amd64 libboost-program-options1.83-dev amd64 1.83.0-2.1+b1 [373 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 320 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.2-1 [155 kB] Get: 321 http://deb.debian.org/debian unstable/main amd64 libpython3.11-dev amd64 3.11.9-1 [4513 kB] Get: 322 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.11.8-1 [9560 B] Get: 323 http://deb.debian.org/debian unstable/main amd64 python3.11-dev amd64 3.11.9-1 [501 kB] Get: 324 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 325 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.2.6-6 [150 kB] Get: 326 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.11.8-1 [26.1 kB] Get: 327 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83-dev amd64 1.83.0-2.1+b1 [379 kB] Get: 328 http://deb.debian.org/debian unstable/main amd64 libboost-python-dev amd64 1.83.0.2+b2 [3892 B] Get: 329 http://deb.debian.org/debian unstable/main amd64 libboost-random1.83.0 amd64 1.83.0-2.1+b1 [238 kB] Get: 330 http://deb.debian.org/debian unstable/main amd64 libboost-random1.83-dev amd64 1.83.0-2.1+b1 [240 kB] Get: 331 http://deb.debian.org/debian unstable/main amd64 libboost-random-dev amd64 1.83.0.2+b2 [3592 B] Get: 332 http://deb.debian.org/debian unstable/main amd64 libboost-regex-dev amd64 1.83.0.2+b2 [3864 B] Get: 333 http://deb.debian.org/debian unstable/main amd64 libboost-serialization-dev amd64 1.83.0.2+b2 [3832 B] Get: 334 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace1.83.0 amd64 1.83.0-2.1+b1 [280 kB] Get: 335 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace1.83-dev amd64 1.83.0-2.1+b1 [245 kB] Get: 336 http://deb.debian.org/debian unstable/main amd64 libboost-stacktrace-dev amd64 1.83.0.2+b2 [3592 B] Get: 337 http://deb.debian.org/debian unstable/main amd64 libboost-system-dev amd64 1.83.0.2+b2 [3736 B] Get: 338 http://deb.debian.org/debian unstable/main amd64 libboost-test-dev amd64 1.83.0.2+b2 [3628 B] Get: 339 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 340 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-2.1+b1 [234 kB] Get: 341 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-2.1+b1 [236 kB] Get: 342 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 343 http://deb.debian.org/debian unstable/main amd64 libboost1.83-tools-dev amd64 1.83.0-2.1+b1 [1500 kB] Get: 344 http://deb.debian.org/debian unstable/main amd64 libboost-tools-dev amd64 1.83.0.2+b2 [3768 B] Get: 345 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure1.83.0 amd64 1.83.0-2.1+b1 [245 kB] Get: 346 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure1.83-dev amd64 1.83.0-2.1+b1 [248 kB] Get: 347 http://deb.debian.org/debian unstable/main amd64 libboost-type-erasure-dev amd64 1.83.0.2+b2 [3688 B] Get: 348 http://deb.debian.org/debian unstable/main amd64 libboost-url1.83.0 amd64 1.83.0-2.1+b1 [336 kB] Get: 349 http://deb.debian.org/debian unstable/main amd64 libboost-url1.83-dev amd64 1.83.0-2.1+b1 [422 kB] Get: 350 http://deb.debian.org/debian unstable/main amd64 libboost-url-dev amd64 1.83.0.2+b2 [3732 B] Get: 351 http://deb.debian.org/debian unstable/main amd64 libboost-wave1.83.0 amd64 1.83.0-2.1+b1 [434 kB] Get: 352 http://deb.debian.org/debian unstable/main amd64 libboost-wave1.83-dev amd64 1.83.0-2.1+b1 [483 kB] Get: 353 http://deb.debian.org/debian unstable/main amd64 libboost-wave-dev amd64 1.83.0.2+b2 [3624 B] Get: 354 http://deb.debian.org/debian unstable/main amd64 libboost-all-dev amd64 1.83.0.2+b2 [3936 B] Get: 355 http://deb.debian.org/debian unstable/main amd64 libcoordgen3 amd64 3.0.2-1+b1 [218 kB] Get: 356 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.7.1-5 [547 kB] Get: 357 http://deb.debian.org/debian unstable/main amd64 libpugixml1v5 amd64 1.14-0.1+b1 [86.6 kB] Get: 358 http://deb.debian.org/debian unstable/main amd64 libpugixml-dev amd64 1.14-0.1+b1 [107 kB] Get: 359 http://deb.debian.org/debian unstable/main amd64 libecpint-dev amd64 1.0.7-4+b1 [260 kB] Get: 360 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-1+b2 [36.4 kB] Get: 361 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-1+b2 [29.7 kB] Get: 362 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-1+b2 [26.2 kB] Get: 363 http://deb.debian.org/debian unstable/main amd64 pkg-config amd64 1.8.1-1+b2 [14.0 kB] Get: 364 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 365 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-1+b2 [344 kB] Get: 366 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-1+b2 [608 kB] Get: 367 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-1+b2 [52.3 kB] Get: 368 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-1+b2 [2125 kB] Get: 369 http://deb.debian.org/debian unstable/main amd64 libgromacs-dev amd64 2024.1-1+b1 [173 kB] Get: 370 http://deb.debian.org/debian unstable/main amd64 libgslcblas0 amd64 2.7.1+dfsg-6+b1 [107 kB] Get: 371 http://deb.debian.org/debian unstable/main amd64 libgsl27 amd64 2.7.1+dfsg-6+b1 [934 kB] Get: 372 http://deb.debian.org/debian unstable/main amd64 libgsl-dev amd64 2.7.1+dfsg-6+b1 [1146 kB] Get: 373 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-3.3 [1241 kB] Get: 374 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-103-1t64 amd64 1.10.10+repack-3.3 [131 kB] Get: 375 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-102t64 amd64 1.10.10+repack-3.3 [89.3 kB] Get: 376 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-3.3 [63.3 kB] Get: 377 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-100t64 amd64 1.10.10+repack-3.3 [40.4 kB] Get: 378 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-100t64 amd64 1.10.10+repack-3.3 [21.3 kB] Get: 379 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3 [290 kB] Get: 380 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3 [71.9 kB] Get: 381 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.2.1-3 [2699 kB] Get: 382 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.10.10+repack-3.3 [2639 kB] Get: 383 http://deb.debian.org/debian unstable/main amd64 libint2-2t64 amd64 2.7.2-1.1 [4074 kB] Get: 384 http://deb.debian.org/debian unstable/main amd64 libint2-dev amd64 2.7.2-1.1 [20.9 MB] Get: 385 http://deb.debian.org/debian unstable/main amd64 libjson-perl all 4.10000-1 [87.5 kB] Get: 386 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b1 [10.4 kB] Get: 387 http://deb.debian.org/debian unstable/main amd64 libmaeparser1 amd64 1.3.1-1+b1 [93.6 kB] Get: 388 http://deb.debian.org/debian unstable/main amd64 libnorm1t64 amd64 1.5.9+dfsg-3.1 [221 kB] Get: 389 http://deb.debian.org/debian unstable/main amd64 libpgm-5.3-0t64 amd64 5.3.128~dfsg-2.1 [161 kB] Get: 390 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.3-1 [1951 kB] Get: 391 http://deb.debian.org/debian unstable/main amd64 librdkit1 amd64 202309.3-3+b1 [4912 kB] Get: 392 http://deb.debian.org/debian unstable/main amd64 librdkit-dev amd64 202309.3-3+b1 [415 kB] Get: 393 http://deb.debian.org/debian unstable/main amd64 libsodium23 amd64 1.0.18-1+b1 [163 kB] Get: 394 http://deb.debian.org/debian unstable/main amd64 libsqlite3-dev amd64 3.45.3-1 [1088 kB] Get: 395 http://deb.debian.org/debian unstable/main amd64 libxc9 amd64 5.2.3-1+b1 [3815 kB] Get: 396 http://deb.debian.org/debian unstable/main amd64 libxc-dev amd64 5.2.3-1+b1 [8165 kB] Get: 397 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1+b1 [232 kB] Get: 398 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b1 [52.6 kB] Get: 399 http://deb.debian.org/debian unstable/main amd64 libzmq5 amd64 4.3.5-1+b2 [281 kB] Get: 400 http://deb.debian.org/debian unstable/main amd64 pandoc-data all 3.1.3-2 [445 kB] Get: 401 http://deb.debian.org/debian unstable/main amd64 pandoc amd64 3.1.3+ds-3 [24.3 MB] Get: 402 http://deb.debian.org/debian unstable/main amd64 pybind11-dev all 2.11.1-2 [191 kB] Get: 403 http://deb.debian.org/debian unstable/main amd64 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 404 http://deb.debian.org/debian unstable/main amd64 python-tinycss2-common all 1.3.0-1 [31.9 kB] Get: 405 http://deb.debian.org/debian unstable/main amd64 python3-alabaster all 0.7.12-1 [20.8 kB] Get: 406 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-6 [16.3 kB] Get: 407 http://deb.debian.org/debian unstable/main amd64 python3-asttokens all 2.4.1-1 [20.6 kB] Get: 408 http://deb.debian.org/debian unstable/main amd64 python3-attr all 23.2.0-2 [65.5 kB] Get: 409 http://deb.debian.org/debian unstable/main amd64 python3-babel all 2.14.0-1 [111 kB] Get: 410 http://deb.debian.org/debian unstable/main amd64 python3-webencodings all 0.5.1-5 [11.1 kB] Get: 411 http://deb.debian.org/debian unstable/main amd64 python3-html5lib all 1.1-6 [90.5 kB] Get: 412 http://deb.debian.org/debian unstable/main amd64 python3-bleach all 6.1.0-2 [50.7 kB] Get: 413 http://deb.debian.org/debian unstable/main amd64 python3-soupsieve all 2.5-1 [38.1 kB] Get: 414 http://deb.debian.org/debian unstable/main amd64 python3-bs4 all 4.12.3-1 [133 kB] Get: 415 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.10.0-1 [66.2 kB] Get: 416 http://deb.debian.org/debian unstable/main amd64 python3-bytecode all 0.15.1-3 [41.5 kB] Get: 417 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2023.11.17-1 [155 kB] Get: 418 http://deb.debian.org/debian unstable/main amd64 python3-cffi-backend amd64 1.16.0-2+b2 [112 kB] Get: 419 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 420 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer all 3.3.2-1 [51.6 kB] Get: 421 http://deb.debian.org/debian unstable/main amd64 python3-traitlets all 5.14.3-1 [70.7 kB] Get: 422 http://deb.debian.org/debian unstable/main amd64 python3-comm all 0.2.1-1 [8104 B] Get: 423 http://deb.debian.org/debian unstable/main amd64 python3-commonmark all 0.9.1-6 [45.3 kB] Get: 424 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.3-1 [659 kB] Get: 425 http://deb.debian.org/debian unstable/main amd64 python3-coverage amd64 7.2.7+dfsg1-1+b1 [170 kB] Get: 426 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-2 [79.4 kB] Get: 427 http://deb.debian.org/debian unstable/main amd64 python3-pydevd amd64 2.10.0+ds-10 [624 kB] Get: 428 http://deb.debian.org/debian unstable/main amd64 python3-debugpy all 1.8.0+ds-4 [66.7 kB] Get: 429 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 430 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 431 http://deb.debian.org/debian unstable/main amd64 python3-roman all 3.3-3 [9880 B] Get: 432 http://deb.debian.org/debian unstable/main amd64 python3-docutils all 0.20.1+dfsg-3 [389 kB] Get: 433 http://deb.debian.org/debian unstable/main amd64 python3-entrypoints all 0.4-2 [7184 B] Get: 434 http://deb.debian.org/debian unstable/main amd64 python3-executing all 2.0.1-0.1 [22.7 kB] Get: 435 http://deb.debian.org/debian unstable/main amd64 python3-fastjsonschema all 2.19.1-1 [21.3 kB] Get: 436 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-8 [5466 kB] Get: 437 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.10.0-1+b3 [1400 kB] Get: 438 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.10.0-1 [14.4 kB] Get: 439 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.0-1 [45.5 kB] Get: 440 http://deb.debian.org/debian unstable/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 441 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 442 http://deb.debian.org/debian unstable/main amd64 python3-trove-classifiers all 2024.1.31-1 [9968 B] Get: 443 http://deb.debian.org/debian unstable/main amd64 python3-hatchling all 1.24.2-1 [53.2 kB] Get: 444 http://deb.debian.org/debian unstable/main amd64 python3-setuptools-scm all 8.0.4-2 [39.5 kB] Get: 445 http://deb.debian.org/debian unstable/main amd64 python3-hatch-vcs all 0.4.0-1 [8336 B] Get: 446 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.6-2 [37.0 kB] Get: 447 http://deb.debian.org/debian unstable/main amd64 python3-imagesize all 1.4.1-1 [6688 B] Get: 448 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 449 http://deb.debian.org/debian unstable/main amd64 python3-parso all 0.8.3-1 [67.4 kB] Get: 450 http://deb.debian.org/debian unstable/main amd64 python3-typeshed all 0.0~git20231111.6764465-3 [1258 kB] Get: 451 http://deb.debian.org/debian unstable/main amd64 python3-jedi all 0.19.1+ds1-1 [691 kB] Get: 452 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib-inline all 0.1.6-2 [8652 B] Get: 453 http://deb.debian.org/debian unstable/main amd64 python3-ptyprocess all 0.7.0-5 [14.7 kB] Get: 454 http://deb.debian.org/debian unstable/main amd64 python3-pexpect all 4.9-2 [55.5 kB] Get: 455 http://deb.debian.org/debian unstable/main amd64 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get: 456 http://deb.debian.org/debian unstable/main amd64 python3-prompt-toolkit all 3.0.43-2 [276 kB] Get: 457 http://deb.debian.org/debian unstable/main amd64 python3-pygments all 2.17.2+dfsg-1 [818 kB] Get: 458 http://deb.debian.org/debian unstable/main amd64 python3-pure-eval all 0.2.2-2 [11.0 kB] Get: 459 http://deb.debian.org/debian unstable/main amd64 python3-stack-data all 0.6.3-1 [21.6 kB] Get: 460 http://deb.debian.org/debian unstable/main amd64 python3-ipython all 8.20.0-1 [556 kB] Get: 461 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.2.1-1 [16.0 kB] Get: 462 http://deb.debian.org/debian unstable/main amd64 python3-jupyter-core all 5.3.2-1 [31.5 kB] Get: 463 http://deb.debian.org/debian unstable/main amd64 python3-nest-asyncio all 1.5.4-1 [6248 B] Get: 464 http://deb.debian.org/debian unstable/main amd64 python3-tornado amd64 6.4.0-1 [347 kB] Get: 465 http://deb.debian.org/debian unstable/main amd64 python3-py all 1.11.0-2 [88.7 kB] Get: 466 http://deb.debian.org/debian unstable/main amd64 python3-zmq amd64 24.0.1-5+b1 [356 kB] Get: 467 http://deb.debian.org/debian unstable/main amd64 python3-jupyter-client all 7.4.9-2 [103 kB] Get: 468 http://deb.debian.org/debian unstable/main amd64 python3-psutil amd64 5.9.8-2 [225 kB] Get: 469 http://deb.debian.org/debian unstable/main amd64 python3-ipykernel all 6.29.3-1 [102 kB] Get: 470 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1 [14.5 kB] Get: 471 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 472 http://deb.debian.org/debian unstable/main amd64 python3-rpds-py amd64 0.12.0-3 [276 kB] Get: 473 http://deb.debian.org/debian unstable/main amd64 python3-referencing all 0.31.0-1 [22.2 kB] Get: 474 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema-specifications all 2023.12.1-1 [8976 B] Get: 475 http://deb.debian.org/debian unstable/main amd64 python3-jsonschema all 4.19.2-2 [71.2 kB] Get: 476 http://deb.debian.org/debian unstable/main amd64 python3-jupyterlab-pygments all 0.2.2-3 [6096 B] Get: 477 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.2.1-1 [1995 kB] Get: 478 http://deb.debian.org/debian unstable/main amd64 python3-lxml-html-clean all 0.1.1-1 [13.0 kB] Get: 479 http://deb.debian.org/debian unstable/main amd64 python3-nbformat all 5.9.1-1 [45.1 kB] Get: 480 http://deb.debian.org/debian unstable/main amd64 python3-nbclient all 0.8.0-1 [64.0 kB] Get: 481 http://deb.debian.org/debian unstable/main amd64 python3-pandocfilters all 1.5.1-1 [23.7 kB] Get: 482 http://deb.debian.org/debian unstable/main amd64 python3-tinycss2 all 1.3.0-1 [22.1 kB] Get: 483 http://deb.debian.org/debian unstable/main amd64 python3-nbconvert all 6.5.3-5 [163 kB] Get: 484 http://deb.debian.org/debian unstable/main amd64 sphinx-common all 7.2.6-6 [702 kB] Get: 485 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 1.26.18-2 [116 kB] Get: 486 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.31.0+dfsg-1 [68.6 kB] Get: 487 http://deb.debian.org/debian unstable/main amd64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 488 http://deb.debian.org/debian unstable/main amd64 python3-sphinx all 7.2.6-6 [552 kB] Get: 489 http://deb.debian.org/debian unstable/main amd64 python3-nbsphinx all 0.8.11+ds-1 [36.1 kB] Get: 490 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.1.2-1 [246 kB] Get: 491 http://deb.debian.org/debian unstable/main amd64 rdkit-data all 202309.3-3 [13.1 MB] Get: 492 http://deb.debian.org/debian unstable/main amd64 python3-rdkit amd64 202309.3-3+b1 [4551 kB] Get: 493 http://deb.debian.org/debian unstable/main amd64 python3-recommonmark all 0.7.1+ds-5 [17.3 kB] Get: 494 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 2.0.0+dfsg-1 [1021 kB] Get: 495 http://deb.debian.org/debian unstable/main amd64 python3-sphinxcontrib.jquery all 4.1-5 [7348 B] Get: 496 http://deb.debian.org/debian unstable/main amd64 python3-sphinx-rtd-theme all 2.0.0+dfsg-1 [28.3 kB] Get: 497 http://deb.debian.org/debian unstable/main amd64 txt2tags all 3.4-4 [112 kB] Fetched 482 MB in 7s (64.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package fonts-lato. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19699 files and directories currently installed.) Preparing to unpack .../0-fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../1-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package ucf. Preparing to unpack .../2-ucf_3.0043+nmu1_all.deb ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_amd64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Setting up libharfbuzz0b:amd64 (8.3.0-2+b1) ... Setting up libboost-url-dev:amd64 (1.83.0.2+b2) ... Setting up libhwloc-dev:amd64 (2.10.0-1+b1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up libboost-regex-dev:amd64 (1.83.0.2+b2) ... Setting up libsm6:amd64 (2:1.2.3-1+b1) ... Setting up libarchive13t64:amd64 (3.7.2-2) ... Setting up libfftw3-dev:amd64 (3.3.10-1+b2) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.120-2) ... Setting up libecpint-dev:amd64 (1.0.7-4+b1) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up libibverbs1:amd64 (50.0-2+b1) ... Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libavif16:amd64 (1.0.4-2) ... Setting up libboost-json1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up libboost-wave1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up libzmq5:amd64 (4.3.5-1+b2) ... Setting up libpython3.12-stdlib:amd64 (3.12.3-1) ... Setting up libxpm4:amd64 (1:3.5.17-1+b1) ... Setting up libboost-locale1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up libdebuginfod-common (0.191-1) ... Setting up libcurl4t64:amd64 (8.7.1-5) ... Setting up ibverbs-providers:amd64 (50.0-2+b1) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up openssh-client (1:9.7p1-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libpango-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libpython3.11t64:amd64 (3.11.9-1) ... Setting up libboost-type-erasure1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up libcurl3t64-gnutls:amd64 (8.7.1-5) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up libboost-random-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-locale-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-wave-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up libclang1-16t64 (1:16.0.6-27) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libclang-cpp16t64 (1:16.0.6-27) ... Setting up libboost-graph1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up libcairo2:amd64 (1.18.0-3+b1) ... Setting up libint2-dev (2.7.2-1.1) ... Setting up libboost-container-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-type-erasure-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-context1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up libxnvctrl0:amd64 (535.171.04-1) ... Setting up libnl-route-3-dev:amd64 (3.7.0-0.3) ... Setting up libboost-coroutine1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up doxygen (1.9.8+ds-2+b1) ... Setting up libboost-fiber1.83-dev:amd64 (1.83.0-2.1+b1) ... Setting up libcurl4-openssl-dev:amd64 (8.7.1-5) ... Setting up libpython3.11-dev:amd64 (3.11.9-1) ... Setting up sphinx-common (7.2.6-6) ... Setting up libxt6t64:amd64 (1:1.2.1-1.2) ... Setting up libevent-dev (2.1.12-stable-8.1+b3) ... Setting up cmake (3.29.2-2) ... Setting up librdmacm1t64:amd64 (50.0-2+b1) ... Setting up libboost-coroutine-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-log1.83-dev (1.83.0-2.1+b1) ... Setting up libboost-json-dev:amd64 (1.83.0.2+b2) ... Setting up libpangoft2-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libboost-log-dev (1.83.0.2+b2) ... Setting up libhsakmt1:amd64 (5.7.0-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libpangocairo-1.0-0:amd64 (1.52.2+ds-1) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up libboost-fiber-dev:amd64 (1.83.0.2+b2) ... Setting up libfabric1:amd64 (1.17.0-3+b1) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-3.3) ... Setting up libboost-graph-dev:amd64 (1.83.0.2+b2) ... Setting up python3.11 (3.11.9-1) ... Setting up libdebuginfod1t64:amd64 (0.191-1+b1) ... Setting up libxmu6:amd64 (2:1.1.3-3+b2) ... Setting up libpython3-dev:amd64 (3.11.8-1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up librdkit1 (202309.3-3+b1) ... Setting up libhdf5-cpp-103-1t64:amd64 (1.10.10+repack-3.3) ... Setting up libhdf5-fortran-102t64:amd64 (1.10.10+repack-3.3) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libxaw7:amd64 (2:1.0.14-1+b2) ... Setting up libboost-context-dev:amd64 (1.83.0.2+b2) ... Setting up python3-pandocfilters (1.5.1-1) ... Setting up libibverbs-dev:amd64 (50.0-2+b1) ... Setting up libhwloc-plugins:amd64 (2.10.0-1+b1) ... Setting up python3-markupsafe (2.1.5-1) ... Setting up python3-webencodings (0.5.1-5) ... Setting up pybind11-dev (2.11.1-2) ... Setting up python3-platformdirs (4.2.1-1) ... Setting up python3-psutil (5.9.8-2) ... Setting up python3-six (1.16.0-6) ... Setting up python3-roman (3.3-3) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.0-1) ... Setting up gdb (13.2-1+b1) ... Setting up python3-wcwidth (0.2.13+dfsg1-1) ... Setting up python3-certifi (2023.11.17-1) ... Setting up python3-typeshed (0.0~git20231111.6764465-3) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-nest-asyncio (1.5.4-1) ... Setting up python3-bytecode (0.15.1-3) ... Setting up librdkit-dev (202309.3-3+b1) ... Setting up python3-idna (3.6-2) ... Setting up python3-typing-extensions (4.10.0-1) ... Setting up libpmix2t64:amd64 (5.0.2-3) ... Setting up python3-html5lib (1.1-6) ... Setting up python3-urllib3 (1.26.18-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-rpds-py (0.12.0-3) ... Setting up python3-fastjsonschema (2.19.1-1) ... Setting up python3-trove-classifiers (2024.1.31-1) ... Setting up python3-lxml:amd64 (5.2.1-1) ... Setting up libhsa-runtime64-1 (5.7.1-2) ... Setting up python3-traitlets (5.14.3-1) ... Setting up python3-dateutil (2.9.0-2) ... Setting up libhdf5-hl-cpp-100t64:amd64 (1.10.10+repack-3.3) ... Setting up python3-pathspec (0.12.1-1) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up python3-soupsieve (2.5-1) ... Setting up libpmix-dev:amd64 (5.0.2-3) ... Setting up python3-cffi-backend:amd64 (1.16.0-2+b2) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-ptyprocess (0.7.0-5) ... Setting up python3-commonmark (0.9.1-6) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-entrypoints (0.4-2) ... Setting up python3-prompt-toolkit (3.0.43-2) ... Setting up python3-distutils (3.12.3-1) ... python3.12: can't get files for byte-compilation Setting up clang-format-16 (1:16.0.6-27) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-attr (23.2.0-2) ... Setting up python3-tornado (6.4.0-1) ... Setting up clang-format:amd64 (1:16.0-58.1) ... Setting up python3-pure-eval (0.2.2-2) ... Setting up python3-tinycss2 (1.3.0-1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-py (1.11.0-2) ... Setting up python3-parso (0.8.3-1) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-asttokens (2.4.1-1) ... Setting up python3-charset-normalizer (3.3.2-1) ... Setting up python3-pytest (8.1.2-1) ... Setting up python3-alabaster (0.7.12-1) ... Setting up libhdf5-hl-fortran-100t64:amd64 (1.10.10+repack-3.3) ... Setting up python3-coverage (7.2.7+dfsg1-1+b1) ... Setting up python3-setuptools-scm (8.0.4-2) ... Setting up python3-bs4 (4.12.3-1) ... Setting up python3-bleach (6.1.0-2) ... Setting up python3-matplotlib-inline (0.1.6-2) ... Setting up python3-comm (0.2.1-1) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up libamdhip64-5 (5.7.1-3) ... Setting up python3-executing (2.0.1-0.1) ... Setting up python3-pexpect (4.9-2) ... Setting up python3-zmq (24.0.1-5+b1) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-requests (2.31.0+dfsg-1) ... Setting up libboost-python1.83-dev (1.83.0-2.1+b1) ... Setting up libhdf5-dev (1.10.10+repack-3.3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-numpy (1:1.26.4+ds-8) ... Setting up python3-lxml-html-clean (0.1.1-1) ... Setting up python3-hatchling (1.24.2-1) ... Setting up python3-pydevd (2.10.0+ds-10) ... Setting up python3-stack-data (0.6.3-1) ... Setting up python3-jupyter-core (5.3.2-1) ... Setting up txt2tags (3.4-4) ... Setting up python3-hatch-vcs (0.4.0-1) ... Setting up python3-referencing (0.31.0-1) ... Setting up dh-python (6.20240422) ... Setting up libucx0:amd64 (1.16.0+ds-5) ... Setting up python3-jedi (0.19.1+ds1-1) ... Setting up python3-h5py-serial (3.10.0-1+b3) ... Setting up python3-debugpy (1.8.0+ds-4) ... Setting up libboost-python-dev (1.83.0.2+b2) ... Setting up python3-jupyterlab-pygments (0.2.2-3) ... Setting up python3-ipython (8.20.0-1) ... Setting up python3-rdkit (202309.3-3+b1) ... Setting up python3-h5py (3.10.0-1) ... Setting up libopenmpi3t64:amd64 (4.1.6-13.3) ... Setting up python3-jupyter-client (7.4.9-2) ... Setting up libboost-mpi1.83.0 (1.83.0-2.1+b1) ... Setting up python3-jsonschema-specifications (2023.12.1-1) ... Setting up openmpi-bin (4.1.6-13.3) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libboost-graph-parallel1.83.0 (1.83.0-2.1+b1) ... Setting up libgromacs9:amd64 (2024.1-1+b1) ... Setting up mpi-default-bin (1.15) ... Setting up gromacs (2024.1-1+b1) ... Setting up python3-jsonschema (4.19.2-2) ... Setting up python3-ipykernel (6.29.3-1) ... Setting up libgromacs-dev (2024.1-1+b1) ... Setting up libopenmpi-dev:amd64 (4.1.6-13.3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up libboost-graph-parallel1.83-dev (1.83.0-2.1+b1) ... Setting up libboost-mpi-python1.83.0 (1.83.0-2.1+b1) ... Setting up python3-nbformat (5.9.1-1) ... Setting up python3-nbclient (0.8.0-1) ... Setting up libboost-graph-parallel-dev (1.83.0.2+b2) ... Setting up python3-nbconvert (6.5.3-5) ... Setting up mpi-default-dev (1.15) ... Setting up libboost-mpi1.83-dev (1.83.0-2.1+b1) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libboost-mpi-python1.83-dev (1.83.0-2.1+b1) ... Setting up libboost-mpi-python-dev (1.83.0.2+b2) ... Setting up libboost-all-dev (1.83.0.2+b2) ... Setting up libheif-plugin-dav1d:amd64 (1.17.6-1+b2) ... Setting up libheif-plugin-libde265:amd64 (1.17.6-1+b2) ... Setting up libheif1:amd64 (1.17.6-1+b2) ... Setting up libgd3:amd64 (2.3.3-9+b3) ... Setting up libgvc6 (2.42.2-9+b1) ... Setting up gnuplot-nox (6.0.0+dfsg1-3) ... update-alternatives: using /usr/bin/gnuplot-nox to provide /usr/bin/gnuplot (gnuplot) in auto mode Setting up graphviz (2.42.2-9+b1) ... Processing triggers for libc-bin (2.38-7) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.20.1+dfsg-3) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.20.1+dfsg-3) ... Setting up python3-sphinx (7.2.6-6) ... Setting up python3-nbsphinx (0.8.11+ds-1) ... Setting up python3-recommonmark (0.7.1+ds-5) ... /usr/lib/python3/dist-packages/recommonmark/transform.py:254: SyntaxWarning: invalid escape sequence '\w' match = re.search('[ ]?[\w_-]+::.*', language) Setting up python3-sphinxcontrib.jquery (4.1-5) ... Setting up python3-sphinx-rtd-theme (2.0.0+dfsg-1) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/votca-2024/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../votca_2024-2_source.changes dpkg-buildpackage: info: source package votca dpkg-buildpackage: info: source version 2024-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nicholas Breen dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with bash-completion,python3,sphinxdoc debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/votca-2024' dh_auto_clean py3clean /build/reproducible-path/votca-2024 rm -rf /build/reproducible-path/votca-2024/.pytest_cache make[1]: Leaving directory '/build/reproducible-path/votca-2024' dh_clean debian/rules binary dh binary --with bash-completion,python3,sphinxdoc dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/votca-2024' dh_auto_configure -- \ -DBUILD_XTP=TRUE \ -DINSTALL_CSGAPPS=TRUE \ -DINJECT_MARCH_NATIVE=FALSE \ -DBUILD_TESTING=TRUE -DENABLE_REGRESSION_TESTING=TRUE cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DBUILD_XTP=TRUE -DINSTALL_CSGAPPS=TRUE -DINJECT_MARCH_NATIVE=FALSE -DBUILD_TESTING=TRUE -DENABLE_REGRESSION_TESTING=TRUE .. -- The CXX compiler identification is GNU 13.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.71.0") found components: unit_test_framework -- Performing Test COMPILER_SUPPORTS-Wall -- Performing Test COMPILER_SUPPORTS-Wall - Success -- Performing Test COMPILER_SUPPORTS-Wextra -- Performing Test COMPILER_SUPPORTS-Wextra - Success -- Performing Test COMPILER_SUPPORTS-Wpedantic -- Performing Test COMPILER_SUPPORTS-Wpedantic - Success -- Performing Test COMPILER_SUPPORTS-Wshadow -- Performing Test COMPILER_SUPPORTS-Wshadow - Success -- Performing Test COMPILER_SUPPORTS-Wconversion -- Performing Test COMPILER_SUPPORTS-Wconversion - Success -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.71.0") found components: program_options filesystem system regex timer -- Found Eigen3: /usr/share/eigen3/cmake -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Found GROMACS: 2024.1 (suffix: _d) CMake Warning at CMakeLists.txt:122 (message): Gromacs-2020 and above have no support for tabulated interactions, that are needed for coarse-graining (see and comment on https://gitlab.com/gromacs/gromacs/-/issues/1347) -- Found Python: /usr/bin/python3 (found suitable version "3.11.9", minimum required is "3.5") found components: Interpreter -- Found SPHINX: /usr/bin/sphinx-build (found version "7.2.6") -- Could NOT find MKL (missing: MKL_DIR) -- Found OpenMP_CXX: -fopenmp (found suitable version "4.5", minimum required is "4.5") -- Found OpenMP: TRUE (found suitable version "4.5", minimum required is "4.5") -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for module 'fftw3' -- Found fftw3, version 3.3.10 -- Found FFTW3: /usr/lib/x86_64-linux-gnu/libfftw3.so -- Looking for C++ include cassert -- Looking for C++ include cassert - found -- Looking for C++ include cmath -- Looking for C++ include cmath - found -- Looking for C++ include fstream -- Looking for C++ include fstream - found -- Looking for C++ include functional -- Looking for C++ include functional - found -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Looking for C++ include limits -- Looking for C++ include limits - found -- Looking for C++ include list -- Looking for C++ include list - found -- Looking for C++ include map -- Looking for C++ include map - found -- Looking for C++ include ostream -- Looking for C++ include ostream - found -- Looking for C++ include sstream -- Looking for C++ include sstream - found -- Looking for C++ include stack -- Looking for C++ include stack - found -- Looking for C++ include stdexcept -- Looking for C++ include stdexcept - found -- Looking for C++ include string -- Looking for C++ include string - found -- Looking for C++ include vector -- Looking for C++ include vector - found -- Found EXPAT: /usr/lib/x86_64-linux-gnu/libexpat.so (found version "2.6.2") -- Found GMX: /usr/bin/gmx_d -- Found UnixCommands: /usr/bin/bash -- Looking for C++ include algorithm -- Looking for C++ include algorithm - found -- Looking for C++ include iomanip -- Looking for C++ include iomanip - found -- Looking for C++ include numeric -- Looking for C++ include numeric - found -- Looking for C++ include cstdlib -- Looking for C++ include cstdlib - found -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.10") found components: CXX -- Could NOT find LMP (missing: LMP_EXECUTABLE) -- Found python module pytest -- Could NOT find LMP (missing: LMP_EXECUTABLE) -- Could NOT find MDRUN_MPI (missing: MDRUN_MPI_EXECUTABLE) -- Found Python: /usr/bin/python3 (found version "3.11.9") found components: Interpreter Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'espressomd' -- Could NOT find ESPRESSO (missing: IMPORT_ESPRESSO_SUCCESS ESPRESSO_HAS_H5MD_SUCCESS) -- Found Python: /usr/bin/python3 (found suitable version "3.11.9", minimum required is "3") found components: Interpreter Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'espressopp' -- Could NOT find ESPRESSOPP (missing: IMPORT_ESPRESSOPP_SUCCESS) Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'cma' -- Could NOT find CMA (missing: IMPORT_CMA_SUCCESS) -- Found Gnuplot: /usr/bin/gnuplot (found version "6.0.0") -- Use VOTCASHARE=/build/reproducible-path/votca-2024/csg/share PATH=/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:$PATH VOTCA_CSG_DEFAULTS=/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml for out-of-cmake testing -- Found libecpint: /usr/lib/x86_64-linux-gnu/cmake/ecpint -- Found HDF5: /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so;/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/x86_64-linux-gnu/libcrypto.so;/usr/lib/x86_64-linux-gnu/libcurl.so;/usr/lib/x86_64-linux-gnu/libpthread.a;/usr/lib/x86_64-linux-gnu/libsz.so;/usr/lib/x86_64-linux-gnu/libz.so;/usr/lib/x86_64-linux-gnu/libdl.a;/usr/lib/x86_64-linux-gnu/libm.so (found suitable version "1.10.10", minimum required is "1.8") found components: CXX CMake Warning at xtp/CMakeLists.txt:24 (message): HDF5 will be used such that it is compatible with version 1.8. -- Found python module lxml -- Found python module h5py -- Found python module rdkit -- Found Python: /usr/include/python3.11 (found suitable version "3.11.9", minimum required is "3.5") found components: Development Development.Module Development.Embed -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.11.1") Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'ase' Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'xmltodict' -- Found python module pytest -- Skipping xtp python bindings -- Could NOT find JUPYTER_NBCONVERT (missing: JUPYTER_EXECUTABLE) (Required is at least version "5.4.1") -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot -- Found CLANG_FORMAT: /usr/bin/clang-format (found suitable version "16.0.6", minimum required is "11") -- The following features have been enabled: * BUILD_XTP, Build xtp module * BUILD_TESTING, Enable unit tests * INSTALL_RC_FILES, Install votca rc files (VOTCARC.bash etc.) * BUILD_MANPAGES, Build manpages (disable for cross-compile) * INSTALL_CSGAPPS, Install extra app using csg * ENABLE_REGRESSION_TESTING, Enable regression tests -- The following OPTIONAL packages have been found: * SPHINX * Gnuplot gnuplot needed to run CMA/simplex regression tests * Doxygen Needed to build API documentation * CLANG_FORMAT (required version >= 11) -- The following RECOMMENDED packages have been found: * GROMACS (required version >= 2019.6) Used to read/write gromacs data files * FFTW3 Enables FFT functionality * PkgConfig Used to detect fftw package * pybind11 Used to build xtp python bindings -- The following REQUIRED packages have been found: * boost_unit_test_framework (required version == 1.83.0) * boost_program_options (required version == 1.83.0) * boost_atomic (required version == 1.83.0) * boost_filesystem (required version == 1.83.0) * boost_system (required version == 1.83.0) * boost_regex (required version == 1.83.0) * boost_headers (required version == 1.83.0) * boost_timer (required version == 1.83.0) * Boost (required version >= 1.71.0) Extended C++ libraries * Eigen3 (required version >= 3.3.0) C++ vector data structures * Threads Used for thread parallelization * OpenMP (required version >= 4.5) Used for thread parallelization in tools * EXPAT Used for XML parsing * UnixCommands Used in testing * Libxc Provides exchange-correclation functionals * libint2 Calculates Gaussian integrals * ecpint Calculates Gaussian integrals over pseudo potentials * HDF5 (required version >= 1.8) Used to read h5md data files Used to read/write HDF5 data files * Python (required version >= 3.5) Used in csg scripts and docu Used to build xtp python bindings -- The following features have been disabled: * ENABLE_RPATH_INJECT, Inject rpath into executables * INJECT_MARCH_NATIVE, Add -march=native to CXX flags * BUILD_OWN_GROMACS, Build an internal version of gromacs * BUILD_OWN_LIBINT, Build an internal version of libint * ENABLE_VALGRIND_TESTING, Run unit tests through valgrind, too * ENABLE_EXPERIMENTAL_TESTS, Enable experimental regression tests * USE_CUDA, Use CUDA for GPU acceleration -- The following OPTIONAL packages have not been found: * MKL Enables accelerated performance with MKL * LMP Lammps binary needed to run lammps regression tests * MDRUN_MPI gromacs mpi binary needed to run parallel gromacs regression tests * ESPRESSO ESPResSo MD python module needed to run ESPResSo MD regression tests * ESPRESSOPP ESPResSo++ MD python module needed to run ESPResSo++ MD regression tests * CMA CMA python module needed to run CMA regression tests * JUPYTER_NBCONVERT (required version >= 5.4.1) -- Configuring done (21.0s) -- Generating done (1.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu # Override various blhc false positives. blhc: ignore-line-regexp: .*C\+\+ vector data structures.* make[1]: Leaving directory '/build/reproducible-path/votca-2024' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/votca-2024' dh_auto_build cd obj-x86_64-linux-gnu && make -j42 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/votca-2024 -B/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/depend make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/depend make -f csg/scripts/CMakeFiles/csg_call_manpage.dir/build.make csg/scripts/CMakeFiles/csg_call_manpage.dir/depend make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/libtools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/gitversion.dir/DependInfo.cmake "--color=" make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/share/man /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/share/man /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/share/man/CMakeFiles/votca_tools_manpages.dir/DependInfo.cmake "--color=" make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/depend make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_call_manpage.dir/DependInfo.cmake "--color=" make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg_inverse_manpage.dir/DependInfo.cmake "--color=" make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/share/man /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/man /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/man/CMakeFiles/votca_csg_manpages.dir/DependInfo.cmake "--color=" make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 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/build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/DependInfo.cmake "--color=" make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts 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"--color=" make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/DependInfo.cmake "--color=" make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix 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/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build make -f csg/scripts/CMakeFiles/csg_call_manpage.dir/build.make csg/scripts/CMakeFiles/csg_call_manpage.dir/build make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build make -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'csg/share/man/CMakeFiles/votca_csg_manpages.dir/build'. make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2024/CMakeModules/gitversion.cmake make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_inverse_build.dir/build.make csg/scripts/CMakeFiles/csg_inverse_build.dir/build make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'tools/share/man/CMakeFiles/votca_tools_manpages.dir/build'. make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 0%] Building csg_inverse manpage [ 0%] Building xtp_basisset manpage [ 0%] Building csg_call manpage [ 0%] Building xtp_modify_jobfile manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_basisset --format groff --out xtp_basisset.man cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_inverse --format groff --out csg_inverse.man [ 1%] Building xtp_update_mapfile manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_modify_jobfile --format groff --out xtp_modify_jobfile.man [ 1%] Building xtp_autogen_mapping manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call --format groff --out csg_call.man [ 1%] Generating csg_inverse [ 1%] Building xtp_qmmm2qm manpage [ 1%] Generating xtp_basisset [ 1%] Generating csg_call [ 1%] Generating xtp_update_mapfile [ 1%] Built target votca_tools_manpages [ 1%] Generating xtp_modify_jobfile [ 1%] Generating xtp_autogen_mapping [ 1%] Built target votca_csg_manpages cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_update_mapfile --format groff --out xtp_update_mapfile.man cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_autogen_mapping --format groff --out xtp_autogen_mapping.man cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -DINPUT="csg_inverse.in2" -DOUTPUT="csg_inverse.install" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_qmmm2qm --format groff --out xtp_qmmm2qm.man cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_basisset.in2" -DOUTPUT="xtp_basisset.install" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_update_mapfile.in2" -DOUTPUT="xtp_update_mapfile.install" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake [ 1%] Generating xtp_qmmm2qm cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_modify_jobfile.in2" -DOUTPUT="xtp_modify_jobfile.install" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -DINPUT="csg_call.in2" -DOUTPUT="csg_call.install" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_autogen_mapping.in2" -DOUTPUT="xtp_autogen_mapping.install" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /usr/bin/cmake -DINPUT="xtp_qmmm2qm.in2" -DOUTPUT="xtp_qmmm2qm.install" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake [ 1%] Generating xtp_benchmark.install cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/benchmark && /usr/bin/cmake -DINPUT="xtp_benchmark.in2" -DOUTPUT="xtp_benchmark" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 1%] Built target gitversion make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/libtools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/votca_tools.dir/DependInfo.cmake "--color=" [ 1%] Built target csg_inverse_build [ 1%] Built target csg_call_build [ 1%] Built target xtp_qmmm2qm_build [ 1%] Built target xtp_autogen_mapping_build [ 1%] Built target xtp_update_mapfile_build [ 1%] Built target xtp_modify_jobfile_build [ 1%] Built target xtp_basisset_build [ 1%] Built target xtp_benchmark_build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/application.cc.o [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/akimaspline.cc.o [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/calculator.cc.o [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/cubicspline.cc.o [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/correlate.cc.o [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/colors.cc.o [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/filesystem.cc.o [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/datacollection.cc.o [ 2%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/crosscorrelate.cc.o [ 3%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/edgecontainer.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/akimaspline.cc.o -MF CMakeFiles/votca_tools.dir/akimaspline.cc.o.d -o CMakeFiles/votca_tools.dir/akimaspline.cc.o -c /build/reproducible-path/votca-2024/tools/src/libtools/akimaspline.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/application.cc.o -MF CMakeFiles/votca_tools.dir/application.cc.o.d -o CMakeFiles/votca_tools.dir/application.cc.o -c /build/reproducible-path/votca-2024/tools/src/libtools/application.cc [ 3%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/edge.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/calculator.cc.o -MF CMakeFiles/votca_tools.dir/calculator.cc.o.d -o CMakeFiles/votca_tools.dir/calculator.cc.o -c /build/reproducible-path/votca-2024/tools/src/libtools/calculator.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/colors.cc.o -MF CMakeFiles/votca_tools.dir/colors.cc.o.d -o CMakeFiles/votca_tools.dir/colors.cc.o -c /build/reproducible-path/votca-2024/tools/src/libtools/colors.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 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tools/src/libtools/CMakeFiles/votca_tools.dir/linspline.cc.o -MF CMakeFiles/votca_tools.dir/linspline.cc.o.d -o CMakeFiles/votca_tools.dir/linspline.cc.o -c /build/reproducible-path/votca-2024/tools/src/libtools/linspline.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow 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-ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/propertyiomanipulator.cc.o -MF CMakeFiles/votca_tools.dir/propertyiomanipulator.cc.o.d -o CMakeFiles/votca_tools.dir/propertyiomanipulator.cc.o -c /build/reproducible-path/votca-2024/tools/src/libtools/propertyiomanipulator.cc [ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/reducededge.cc.o [ 6%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/reducedgraph.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT tools/src/libtools/CMakeFiles/votca_tools.dir/rangeparser.cc.o -MF CMakeFiles/votca_tools.dir/rangeparser.cc.o.d -o CMakeFiles/votca_tools.dir/rangeparser.cc.o -c /build/reproducible-path/votca-2024/tools/src/libtools/rangeparser.cc [ 6%] Built target csg_call_manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK 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tools/src/libtools/CMakeFiles/votca_tools.dir/spline.cc.o -MF CMakeFiles/votca_tools.dir/spline.cc.o.d -o CMakeFiles/votca_tools.dir/spline.cc.o -c /build/reproducible-path/votca-2024/tools/src/libtools/spline.cc [ 7%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/table.cc.o [ 7%] Building CXX object tools/src/libtools/CMakeFiles/votca_tools.dir/tokenizer.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -Dvotca_tools_EXPORTS -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linalg.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducededge.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/build make -f tools/src/tests/CMakeFiles/unit_test_calculator.dir/build.make tools/src/tests/CMakeFiles/unit_test_calculator.dir/build make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/build make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build.make tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build.make tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_identity.dir/build.make tools/src/tests/CMakeFiles/unit_test_identity.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_linalg.dir/build.make tools/src/tests/CMakeFiles/unit_test_linalg.dir/build make -f tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build.make tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 7%] Building CXX object tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_name.dir/build.make tools/src/tests/CMakeFiles/unit_test_name.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build.make tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build make -f tools/src/tests/CMakeFiles/unit_test_property.dir/build.make tools/src/tests/CMakeFiles/unit_test_property.dir/build make -f tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o -MF CMakeFiles/unit_test_constants.dir/test_constants.cc.o.d -o CMakeFiles/unit_test_constants.dir/test_constants.cc.o -c /build/reproducible-path/votca-2024/tools/src/tests/test_constants.cc make -f tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build make -f tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build.make tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_table.dir/build.make tools/src/tests/CMakeFiles/unit_test_table.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_thread.dir/build.make tools/src/tests/CMakeFiles/unit_test_thread.dir/build [ 7%] Building CXX object tools/src/tests/CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build.make tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_random.dir/build.make tools/src/tests/CMakeFiles/unit_test_random.dir/build [ 7%] Building CXX object tools/src/tools/CMakeFiles/votca_property.dir/votca_property.cc.o make -f tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build make -f tools/src/tests/CMakeFiles/unit_test_linspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_linspline.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT tools/src/tests/CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o -MF CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o.d -o CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o -c /build/reproducible-path/votca-2024/tools/src/tests/test_calculator.cc make -f tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build.make tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build make -f tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build.make tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT tools/src/tools/CMakeFiles/votca_property.dir/votca_property.cc.o -MF CMakeFiles/votca_property.dir/votca_property.cc.o.d -o CMakeFiles/votca_property.dir/votca_property.cc.o -c /build/reproducible-path/votca-2024/tools/src/tools/votca_property.cc make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build.make tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_thread.dir/test_thread.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_property.dir/test_property.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o [ 18%] Building CXX object tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_table.dir/test_table.cc.o [ 18%] Building CXX object tools/src/tests/CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o [ 9%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o [ 9%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadlist.cc.o [ 9%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotif.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o [ 18%] Building CXX object tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o [ 18%] Building CXX object tools/src/tests/CMakeFiles/unit_test_name.dir/test_name.cc.o [ 11%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_identity.dir/test_identity.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o [ 18%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_random.dir/test_random.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/test_akimaspline.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o [ 18%] Building CXX object tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT tools/src/tests/CMakeFiles/unit_test_thread.dir/test_thread.cc.o -MF CMakeFiles/unit_test_thread.dir/test_thread.cc.o.d -o CMakeFiles/unit_test_thread.dir/test_thread.cc.o -c /build/reproducible-path/votca-2024/tools/src/tests/test_thread.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -MF CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o.d -o CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o -c /build/reproducible-path/votca-2024/tools/src/tests/test_edgecontainer.cc [ 9%] Building CXX object tools/src/tests/CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/tools/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT tools/src/tests/CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o -MF 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-I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o -MF CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o.d -o CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o -c /build/reproducible-path/votca-2024/tools/src/tests/test_tokenizer.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DTOOLS_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/tools/src/tests/DataFiles\" 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-I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT tools/src/tests/CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o -MF CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o.d -o CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o -c /build/reproducible-path/votca-2024/tools/src/tests/test_edge_base.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB 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/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadlist.cc.o -MF CMakeFiles/votca_csg.dir/beadlist.cc.o.d -o CMakeFiles/votca_csg.dir/beadlist.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/beadlist.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotif.cc.o -MF CMakeFiles/votca_csg.dir/beadmotif.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotif.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/beadmotif.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o -MF CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotifalgorithms.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/beadmotifalgorithms.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o -MF CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o.d -o CMakeFiles/votca_csg.dir/beadmotifconnector.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/beadmotifconnector.cc [ 18%] Linking CXX executable unit_test_floatingpointcomparison cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_floatingpointcomparison.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o -o unit_test_floatingpointcomparison -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 18%] Linking CXX executable unit_test_filesystem cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_filesystem.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o -o unit_test_filesystem -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 18%] Built target unit_test_filesystem [ 18%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructure.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructure.cc.o -MF CMakeFiles/votca_csg.dir/beadstructure.cc.o.d -o CMakeFiles/votca_csg.dir/beadstructure.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/beadstructure.cc [ 18%] Built target unit_test_floatingpointcomparison [ 18%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o -MF CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o.d -o CMakeFiles/votca_csg.dir/beadstructurealgorithms.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/beadstructurealgorithms.cc [ 18%] Linking CXX executable unit_test_name cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_name.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_name.dir/test_name.cc.o -o unit_test_name -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 18%] Built target unit_test_name [ 18%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/boundarycondition.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/boundarycondition.cc.o -MF CMakeFiles/votca_csg.dir/boundarycondition.cc.o.d -o CMakeFiles/votca_csg.dir/boundarycondition.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/boundarycondition.cc [ 18%] Linking CXX executable unit_test_objectfactory [ 18%] Linking CXX executable unit_test_calculator cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_calculator.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_objectfactory.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o -o unit_test_objectfactory -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o -o unit_test_calculator -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 18%] Linking CXX executable unit_test_identity cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_identity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_identity.dir/test_identity.cc.o -o unit_test_identity -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 18%] Built target unit_test_calculator [ 18%] Built target unit_test_objectfactory [ 18%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/cgengine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg 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-fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/map.cc.o -MF CMakeFiles/votca_csg.dir/map.cc.o.d -o CMakeFiles/votca_csg.dir/map.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/map.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o -o unit_test_structureparameters -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 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-ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/molecule.cc.o -MF CMakeFiles/votca_csg.dir/molecule.cc.o.d -o CMakeFiles/votca_csg.dir/molecule.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/molecule.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_correlate.dir/test_correlate.cc.o -o unit_test_correlate -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 20%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/nblist.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/nblist.cc.o -MF CMakeFiles/votca_csg.dir/nblist.cc.o.d -o CMakeFiles/votca_csg.dir/nblist.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/nblist.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o -o unit_test_NDimVector -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 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/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/openbox.cc.o -MF CMakeFiles/votca_csg.dir/openbox.cc.o.d -o CMakeFiles/votca_csg.dir/openbox.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/openbox.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 22%] Built target unit_test_linalg [ 22%] Built target unit_test_linspline [ 22%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunction.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB 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-ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o -MF CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o.d -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctioncbspl.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/potentialfunctions/potentialfunctioncbspl.cc [ 22%] Linking CXX executable unit_test_eigenio_matrixmarket cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eigenio_matrixmarket.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security 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CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionlj126.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/potentialfunctions/potentialfunctionlj126.cc [ 22%] Linking CXX executable unit_test_elements cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_elements.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_elements.dir/test_elements.cc.o -o unit_test_elements -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 22%] Built target unit_test_elements [ 22%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o -MF CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o.d -o CMakeFiles/votca_csg.dir/potentialfunctions/potentialfunctionljg.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/potentialfunctions/potentialfunctionljg.cc [ 22%] Linking CXX executable unit_test_graphvisitor cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphvisitor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o -o unit_test_graphvisitor -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 22%] Built target unit_test_graphvisitor [ 22%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/topology.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK 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/build/reproducible-path/votca-2024/csg/src/libcsg/topology.cc [ 22%] Linking CXX executable unit_test_edge_base cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_edge_base.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o -o unit_test_edge_base -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a 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/usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 22%] Built target unit_test_edge_base [ 23%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/topologymap.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/topologymap.cc.o -MF CMakeFiles/votca_csg.dir/topologymap.cc.o.d -o CMakeFiles/votca_csg.dir/topologymap.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/topologymap.cc [ 24%] Linking CXX executable unit_test_cubicspline cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_cubicspline.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o -o unit_test_cubicspline -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 24%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/topologyreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/topologyreader.cc.o -MF CMakeFiles/votca_csg.dir/topologyreader.cc.o.d -o CMakeFiles/votca_csg.dir/topologyreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/topologyreader.cc [ 24%] Built target unit_test_crosscorrelate [ 24%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/trajectoryreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/trajectoryreader.cc.o -MF CMakeFiles/votca_csg.dir/trajectoryreader.cc.o.d -o CMakeFiles/votca_csg.dir/trajectoryreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/trajectoryreader.cc [ 24%] Linking CXX executable votca_property cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/votca_property.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/votca_property.dir/votca_property.cc.o -o votca_property -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 24%] Built target unit_test_cubicspline [ 24%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/trajectorywriter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/trajectorywriter.cc.o -MF CMakeFiles/votca_csg.dir/trajectorywriter.cc.o.d -o CMakeFiles/votca_csg.dir/trajectorywriter.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/trajectorywriter.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 24%] Built target votca_property make -f tools/src/tools/CMakeFiles/votca_property_manpage.dir/build.make tools/src/tools/CMakeFiles/votca_property_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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/usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 24%] Built target unit_test_graph_df_visitor [ 24%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/dlpolytrajectoryreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/dlpolytrajectoryreader.cc [ 24%] Linking CXX executable unit_test_graphdistvisitor cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_graphdistvisitor.dir/link.txt --verbose=1 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/usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 27%] Linking CXX executable unit_test_table cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_table.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_table.dir/test_table.cc.o -o unit_test_table -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 27%] Built target unit_test_graphdistvisitor [ 27%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/groreader.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 27%] Built target unit_test_datacollection [ 27%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB 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/build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/growriter.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 27%] Built target unit_test_table [ 28%] Linking CXX executable unit_test_graphnode [ 28%] Linking CXX executable unit_test_edgecontainer [ 28%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o [ 28%] Linking CXX executable unit_test_graph_bf_visitor cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include 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-ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o -o unit_test_graph_bf_visitor -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o -o unit_test_tokenizer -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 28%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdumpreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdumpreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/lammpsdumpreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/lammpsdumpreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/lammpsdumpreader.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 28%] Built target unit_test_edgecontainer make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 28%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdumpwriter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdumpwriter.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/lammpsdumpwriter.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/lammpsdumpwriter.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/lammpsdumpwriter.cc [ 28%] Linking CXX executable unit_test_property cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_property.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 28%] Built target unit_test_graph_bf_visitor [ 28%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/pdbreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/pdbreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/pdbreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/pdbreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/pdbreader.cc [ 28%] Built target unit_test_tokenizer /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_property.dir/test_property.cc.o -o unit_test_property -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so [ 28%] Built target unit_test_graphnode [ 29%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/xmltopologyreader.cc [ 29%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/pdbwriter.cc [ 29%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/xyzwriter.cc [ 29%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xyzreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xyzreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/xyzreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/xyzreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/xyzreader.cc [ 29%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_LINK -DBOOST_REGEX_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/gmxtopologyreader.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 29%] Linking CXX executable unit_test_optionshandler cd 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/usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtrajectoryreader.cc.o -MF CMakeFiles/votca_csg.dir/modules/io/gmxtrajectoryreader.cc.o.d -o CMakeFiles/votca_csg.dir/modules/io/gmxtrajectoryreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/libcsg/modules/io/gmxtrajectoryreader.cc [ 29%] Building CXX object csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtrajectorywriter.cc.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now 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CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o CMakeFiles/votca_csg.dir/modules/io/lammpsdumpreader.cc.o CMakeFiles/votca_csg.dir/modules/io/lammpsdumpwriter.cc.o CMakeFiles/votca_csg.dir/modules/io/pdbreader.cc.o CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o CMakeFiles/votca_csg.dir/modules/io/xyzreader.cc.o CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o CMakeFiles/votca_csg.dir/modules/io/gmxtrajectoryreader.cc.o CMakeFiles/votca_csg.dir/modules/io/gmxtrajectorywriter.cc.o CMakeFiles/votca_csg.dir/modules/io/h5mdtrajectoryreader.cc.o -Wl,-rpath,/usr/lib/x86_64-linux-gnu/hdf5/serial:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: /usr/lib/x86_64-linux-gnu/libgromacs_d.so.9.0.0 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_regex.so.1.83.0 -lm /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libfftw3.so cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg && /usr/bin/cmake -E cmake_symlink_library libvotca_csg.so.2024 libvotca_csg.so.2024 libvotca_csg.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 29%] Built target votca_csg make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/depend make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make 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csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/build cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -MF 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-o CMakeFiles/csg_stat.dir/csg_stat.cc.o -c /build/reproducible-path/votca-2024/csg/src/tools/csg_stat.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -MF CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o.d -o CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/GaussianQuadratureBase.cc make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include 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-D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tools/CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -MF CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o.d -o CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -c /build/reproducible-path/votca-2024/csg/src/tools/csg_fmatch.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o -MF CMakeFiles/csg_density.dir/csg_density.cc.o.d -o CMakeFiles/csg_density.dir/csg_density.cc.o -c /build/reproducible-path/votca-2024/csg/src/tools/csg_density.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tools/CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -MF CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o.d -o CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -c /build/reproducible-path/votca-2024/csg/src/tools/csg_dlptopol.cc make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o -MF CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o.d -o CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o -c /build/reproducible-path/votca-2024/csg/src/csg_boltzmann/bondedstatistics.cc make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -MF CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o.d -o CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -c /build/reproducible-path/votca-2024/csg/src/csgapps/part_dist/part_dist.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o -MF CMakeFiles/unit_test_bead.dir/test_bead.cc.o.d -o CMakeFiles/unit_test_bead.dir/test_bead.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_bead.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -MF CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o.d -o CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -c /build/reproducible-path/votca-2024/csg/src/csgapps/orientcorr/orientcorr.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -MF CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o.d -o CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_beadmotif_algorithms.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -MF CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o.d -o CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_beadmotif_base.cc make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/activedensitymatrix.cc.o -MF CMakeFiles/votca_xtp.dir/activedensitymatrix.cc.o.d -o CMakeFiles/votca_xtp.dir/activedensitymatrix.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/activedensitymatrix.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -MF CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o.d -o CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_beadtriple.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o -MF CMakeFiles/radii.dir/radii/radii.cc.o.d -o CMakeFiles/radii.dir/radii/radii.cc.o -c /build/reproducible-path/votca-2024/csg/src/csgapps/radii/radii.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/csgapps/CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -MF CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o.d -o CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -c /build/reproducible-path/votca-2024/csg/src/csgapps/fluctuations/fluctuations.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tools/CMakeFiles/csg_map.dir/csg_map.cc.o -MF CMakeFiles/csg_map.dir/csg_map.cc.o.d -o CMakeFiles/csg_map.dir/csg_map.cc.o -c /build/reproducible-path/votca-2024/csg/src/tools/csg_map.cc make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -MF CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o.d -o CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_basebead.cc make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -MF CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o.d -o CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_nblist_3body.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -MF CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o.d -o CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_interaction.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -MF CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o.d -o CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_nblistgrid_3body.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -MF CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o.d -o CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_pdbreader.cc [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -MF CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o.d -o CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_csg_topology.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -MF CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o.d -o CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_beadstructure_base.cc [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -MF CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o.d -o CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_boundarycondition.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -MF CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o.d -o CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_lammpsdatareader.cc [ 36%] Building CXX object csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -MF CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o.d -o CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_lammpsdumpreaderwriter.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -MF CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o.d -o CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_beadmotif_connector.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -MF CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o.d -o CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_beadstructure_algorithms.cc make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_triplelist.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 37%] Building CXX object csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -MF CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o.d -o CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_triplelist.cc [ 38%] Linking CXX executable unit_test_boundarycondition cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_boundarycondition.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_boundarycondition.dir/test_boundarycondition.cc.o -o unit_test_boundarycondition -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 38%] Built target unit_test_boundarycondition [ 38%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o -MF CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o.d -o CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/anderson_mixing.cc [ 38%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aobasis.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aobasis.cc.o -MF CMakeFiles/votca_xtp.dir/aobasis.cc.o.d -o CMakeFiles/votca_xtp.dir/aobasis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/aobasis.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/activedensitymatrix.h:24, from /build/reproducible-path/votca-2024/xtp/src/libxtp/activedensitymatrix.cc:34: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 38%] Linking CXX executable unit_test_beadmotif_base cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_base.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o -o unit_test_beadmotif_base -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 38%] Linking CXX executable csg_property cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_property.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_property.dir/csg_property.cc.o -o csg_property -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 40%] Linking CXX executable csg_resample cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_resample.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_resample.dir/csg_resample.cc.o -o csg_resample -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target unit_test_beadmotif_base [ 40%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aoecp.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aoecp.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_property [ 40%] Building CXX object csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -MF CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o.d -o CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -c /build/reproducible-path/votca-2024/csg/src/csgapps/partial_rdf/rdf_calculator.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_resample make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/share/template /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_serial.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Building CXX object csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o -MF CMakeFiles/template_serial.dir/template_serial.cc.o.d -o CMakeFiles/template_serial.dir/template_serial.cc.o -c /build/reproducible-path/votca-2024/csg/share/template/template_serial.cc [ 40%] Linking CXX executable unit_test_beadstructure_algorithms cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadstructure_algorithms.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadstructure_algorithms.dir/test_beadstructure_algorithms.cc.o -o unit_test_beadstructure_algorithms -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target unit_test_beadstructure_algorithms make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/share/template /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_threaded.dir/DependInfo.cmake "--color=" [ 40%] Linking CXX executable unit_test_beadmotif_connector cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_connector.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_connector.dir/test_beadmotif_connector.cc.o -o unit_test_beadmotif_connector -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 40%] Building CXX object csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o -MF CMakeFiles/template_threaded.dir/template_threaded.cc.o.d -o CMakeFiles/template_threaded.dir/template_threaded.cc.o -c /build/reproducible-path/votca-2024/csg/share/template/template_threaded.cc [ 40%] Linking CXX executable csg_dump cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_dump.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_dump.dir/csg_dump.cc.o -o csg_dump -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 40%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aomatrix.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aomatrix.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target unit_test_beadmotif_connector make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Building csg_property manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_property --format groff --out csg_property.man make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_property_manpage make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Building csg_resample manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_resample --format groff --out csg_resample.man make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_dump [ 40%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aomultipole.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aomultipole.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_resample_manpage make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Building csg_dump manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --format groff --out csg_dump.man make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_dump_manpage [ 40%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aoplanewave.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aoplanewave.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 41%] Linking CXX executable unit_test_beadstructure_base cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadstructure_base.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadstructure_base.dir/test_beadstructure_base.cc.o -o unit_test_beadstructure_base -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/src/libxtp/aobasis.cc:23: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 41%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aopotential.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aopotential.cc [ 41%] Linking CXX executable unit_test_basebead cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_basebead.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_basebead.dir/test_basebead.cc.o -o unit_test_basebead -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 41%] Linking CXX executable unit_test_pdbreader cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_pdbreader.dir/link.txt --verbose=1 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o -o unit_test_pdbreader -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::AOGaussianPrimitive; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/src/libxtp/aobasis.cc:150:39: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 41%] Built target unit_test_beadstructure_base [ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o -MF CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o.d -o CMakeFiles/votca_xtp.dir/aomatrices/aotransform.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aotransform.cc [ 42%] Linking CXX executable unit_test_beadtriple cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadtriple.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o -o unit_test_beadtriple -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 42%] Built target unit_test_pdbreader [ 42%] Built target unit_test_basebead [ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aoshell.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/aoshell.cc.o -MF CMakeFiles/votca_xtp.dir/aoshell.cc.o.d -o CMakeFiles/votca_xtp.dir/aoshell.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/aoshell.cc [ 42%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/atom.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/atom.cc.o -MF CMakeFiles/votca_xtp.dir/atom.cc.o.d -o CMakeFiles/votca_xtp.dir/atom.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/atom.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 42%] Built target unit_test_beadtriple [ 42%] Linking CXX executable unit_test_nblistgrid_3body cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_nblistgrid_3body.dir/link.txt --verbose=1 [ 44%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/basisset.cc.o [ 44%] Linking CXX executable unit_test_beadmotif_algorithms /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o -o unit_test_nblistgrid_3body -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/basisset.cc.o -MF CMakeFiles/votca_xtp.dir/basisset.cc.o.d -o CMakeFiles/votca_xtp.dir/basisset.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/basisset.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_beadmotif_algorithms.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_beadmotif_algorithms.dir/test_beadmotif_algorithms.cc.o -o unit_test_beadmotif_algorithms -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 44%] Linking CXX executable radii/csg_radii cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/radii.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/radii.dir/radii/radii.cc.o -o radii/csg_radii -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aoecp.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 44%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o -MF CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o.d -o CMakeFiles/votca_xtp.dir/bfgs_trm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/bfgs_trm.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 44%] Built target votca_csg_boltzmann make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake "--color=" [ 44%] Linking CXX executable csg_gmxtopol [ 44%] Linking CXX executable sphericalorder/csg_sphericalorder cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_gmxtopol.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sphericalorder.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -o sphericalorder/csg_sphericalorder -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -o csg_gmxtopol -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 44%] Building CXX object csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o -MF CMakeFiles/csg_boltzmann.dir/main.cc.o.d -o CMakeFiles/csg_boltzmann.dir/main.cc.o -c /build/reproducible-path/votca-2024/csg/src/csg_boltzmann/main.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 44%] Built target radii [ 44%] Built target unit_test_nblistgrid_3body make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 44%] Building CXX object csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o [ 44%] Building CXX object csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -MF CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o.d -o CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_tabulatedpotential.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DCSG_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/csg/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -MF CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o.d -o CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o -c /build/reproducible-path/votca-2024/csg/src/tests/test_bondedstatistics.cc [ 44%] Built target unit_test_beadmotif_algorithms make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 45%] Building csg_radii manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name radii/csg_radii --format groff --out radii.man make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 45%] Built target sphericalorder make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 45%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -MF CMakeFiles/votca_xtp.dir/bsecoupling.cc.o.d -o CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/bsecoupling.cc [ 45%] Built target radii_manpage [ 45%] Built target csg_gmxtopol make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/depend [ 45%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/eanalyze.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/eanalyze.cc make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 45%] Linking CXX executable unit_test_bead cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bead.dir/link.txt --verbose=1 [ 45%] Building csg_sphericalorder manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name sphericalorder/csg_sphericalorder --format groff --out sphericalorder.man /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bead.dir/test_bead.cc.o -o unit_test_bead -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 45%] Linking CXX executable unit_test_interaction cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_interaction.dir/link.txt --verbose=1 [ 45%] Linking CXX executable unit_test_nblist_3body [ 45%] Built target sphericalorder_manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_nblist_3body.dir/link.txt --verbose=1 make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o -o unit_test_interaction -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o -o unit_test_nblist_3body -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 45%] Building csg_gmxtopol manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_gmxtopol --format groff --out csg_gmxtopol.man [ 45%] Linking CXX executable unit_test_csg_topology cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_csg_topology.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o -o unit_test_csg_topology -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 45%] Built target csg_gmxtopol_manpage [ 45%] Built target unit_test_bead [ 45%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/einternal.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial 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make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 45%] Linking CXX executable csg_map cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_map.dir/link.txt --verbose=1 [ 46%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/ianalyze.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_map.dir/csg_map.cc.o -o csg_map -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 46%] Built target unit_test_nblist_3body [ 46%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/kmclifetime.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 46%] Built target unit_test_interaction [ 46%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/kmcmultiple.cc [ 46%] Linking CXX executable unit_test_lammpsdatareader cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_lammpsdatareader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o -o unit_test_lammpsdatareader -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 46%] Linking CXX executable csg_density cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_density.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_density.dir/csg_density.cc.o -o csg_density -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 46%] Built target unit_test_csg_topology [ 46%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/neighborlist.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/neighborlist.cc [ 46%] Built target csg_map [ 46%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o -MF CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o.d -o CMakeFiles/votca_xtp.dir/calculators/vaverage.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/vaverage.cc [ 48%] Linking CXX executable csg_dlptopol make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 48%] Linking CXX executable traj_force/csg_traj_force cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/traj_force.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_dlptopol.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -o csg_dlptopol -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -o traj_force/csg_traj_force -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 48%] Built target unit_test_lammpsdatareader make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 48%] Building csg_map manpage make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_map --format groff --out csg_map.man [ 48%] Built target csg_density [ 48%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/checkpoint.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/checkpoint.cc.o -MF CMakeFiles/votca_xtp.dir/checkpoint.cc.o.d -o CMakeFiles/votca_xtp.dir/checkpoint.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc [ 48%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/classicalsegment.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/classicalsegment.cc.o -MF CMakeFiles/votca_xtp.dir/classicalsegment.cc.o.d -o CMakeFiles/votca_xtp.dir/classicalsegment.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/classicalsegment.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 48%] Built target csg_map_manpage [ 48%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/couplingbase.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/couplingbase.cc.o -MF CMakeFiles/votca_xtp.dir/couplingbase.cc.o.d -o CMakeFiles/votca_xtp.dir/couplingbase.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/couplingbase.cc [ 49%] Linking CXX executable part_dist/csg_part_dist cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/part_dist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -o part_dist/csg_part_dist -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o -MF CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o.d -o CMakeFiles/votca_xtp.dir/cubefile_writer.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/cubefile_writer.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aomultipole.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 50%] Linking CXX executable fluctuations/csg_fluctuations cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fluctuations.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -o fluctuations/csg_fluctuations -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 50%] Linking CXX executable orientcorr/csg_orientcorr cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/orientcorr.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -o orientcorr/csg_orientcorr -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Built target csg_dlptopol make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density_manpage.dir/DependInfo.cmake "--color=" [ 50%] Built target traj_force make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Building csg_density manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_density --format groff --out csg_density.man [ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o -MF CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o.d -o CMakeFiles/votca_xtp.dir/davidsonsolver.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/davidsonsolver.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Built target part_dist [ 50%] Built target csg_density_manpage make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/depend [ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftcoupling.cc.o In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aoplanewave.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftcoupling.cc.o -MF CMakeFiles/votca_xtp.dir/dftcoupling.cc.o.d -o CMakeFiles/votca_xtp.dir/dftcoupling.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/dftcoupling.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Building csg_dlptopol manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dlptopol --format groff --out csg_dlptopol.man In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Built target csg_dlptopol_manpage make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/ERIs.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/dftengine/ERIs.cc [ 50%] Built target orientcorr [ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/adiis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/dftengine/adiis.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/convergenceacc.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/dftengine/convergenceacc.cc [ 50%] Built target fluctuations make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Building csg_part_dist manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name part_dist/csg_part_dist --format groff --out part_dist.man /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/src/libxtp/atom.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:30: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Built target part_dist_manpage [ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/dftengine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/dftengine/dftengine.cc [ 50%] Linking CXX executable unit_test_lammpsdumpreaderwriter cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o -o unit_test_lammpsdumpreaderwriter -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/aomatrices/aopotential.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 50%] Linking CXX executable unit_test_triplelist cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_triplelist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o -o unit_test_triplelist -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 50%] Building csg_traj_force manpage make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name traj_force/csg_traj_force --format groff --out traj_force.man [ 50%] Built target unit_test_lammpsdumpreaderwriter [ 50%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/diis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/dftengine/diis.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 51%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/embeddingengine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/dftengine/embeddingengine.cc.o -MF CMakeFiles/votca_xtp.dir/dftengine/embeddingengine.cc.o.d -o CMakeFiles/votca_xtp.dir/dftengine/embeddingengine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/dftengine/embeddingengine.cc [ 51%] Built target unit_test_triplelist make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 51%] Built target traj_force_manpage make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/DependInfo.cmake "--color=" [ 51%] Building csg_fluctuations manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name fluctuations/csg_fluctuations --format groff --out fluctuations.man make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 51%] Building csg_orientcorr manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name orientcorr/csg_orientcorr --format groff --out orientcorr.man In file included from /build/reproducible-path/votca-2024/xtp/src/libxtp/aoshell.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:30: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 51%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o -MF CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o.d -o CMakeFiles/votca_xtp.dir/ecpaobasis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/ecpaobasis.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 51%] Built target fluctuations_manpage [ 51%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o -MF CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o.d -o CMakeFiles/votca_xtp.dir/ecpbasisset.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/ecpbasisset.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 51%] Built target orientcorr_manpage [ 51%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/eeinteractor.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/eeinteractor.cc.o -MF CMakeFiles/votca_xtp.dir/eeinteractor.cc.o.d -o CMakeFiles/votca_xtp.dir/eeinteractor.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/eeinteractor.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 51%] Linking CXX executable csg_stat cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_stat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_stat.dir/csg_stat.cc.o CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -o csg_stat -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc:32: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 51%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/erdiabatization.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/erdiabatization.cc.o -MF CMakeFiles/votca_xtp.dir/erdiabatization.cc.o.d -o CMakeFiles/votca_xtp.dir/erdiabatization.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/erdiabatization.cc [ 51%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/esp2multipole.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/esp2multipole.cc.o -MF CMakeFiles/votca_xtp.dir/esp2multipole.cc.o.d -o CMakeFiles/votca_xtp.dir/esp2multipole.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/esp2multipole.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 51%] Built target csg_stat make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 53%] Building csg_stat manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_stat --format groff --out csg_stat.man In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/einternal.cc:19: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gnode.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/kmclifetime.cc:32: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 53%] Built target csg_stat_manpage In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 53%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/espfit.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/espfit.cc.o -MF CMakeFiles/votca_xtp.dir/espfit.cc.o.d -o CMakeFiles/votca_xtp.dir/espfit.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/espfit.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/eanalyze.h:36, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/eanalyze.cc:19: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc: In constructor 'votca::xtp::CheckpointFile::CheckpointFile(std::string, votca::xtp::CheckpointAccessLevel)': /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc:74:59: warning: implicitly-declared 'H5::H5File& H5::H5File::operator=(const H5::H5File&)' is deprecated [-Wdeprecated-copy] 74 | fileHandle_ = H5::H5File(fileName_, H5F_ACC_RDONLY); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:47: /usr/include/hdf5/serial/H5File.h:104:5: note: because 'H5::H5File' has user-provided 'H5::H5File::H5File(const H5::H5File&)' 104 | H5File(const H5File &original); | ^~~~~~ /usr/include/hdf5/serial/H5File.h: In member function 'H5::H5File& H5::H5File::operator=(const H5::H5File&)': /usr/include/hdf5/serial/H5File.h:24:17: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 24 | class H5_DLLCPP H5File : public Group { | ^~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc: In constructor 'votca::xtp::CheckpointFile::CheckpointFile(std::string, votca::xtp::CheckpointAccessLevel)': /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc:74:59: note: synthesized method 'H5::H5File& H5::H5File::operator=(const H5::H5File&)' first required here 74 | fileHandle_ = H5::H5File(fileName_, H5F_ACC_RDONLY); | ^ /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc:77:67: warning: implicitly-declared 'H5::H5File& H5::H5File::operator=(const H5::H5File&)' is deprecated [-Wdeprecated-copy] 77 | fileHandle_ = H5::H5File(fileName_, H5F_ACC_TRUNC, fcpList); | ^ /usr/include/hdf5/serial/H5File.h:104:5: note: because 'H5::H5File' has user-provided 'H5::H5File::H5File(const H5::H5File&)' 104 | H5File(const H5File &original); | ^~~~~~ /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc:81:69: warning: implicitly-declared 'H5::H5File& H5::H5File::operator=(const H5::H5File&)' is deprecated [-Wdeprecated-copy] 81 | fileHandle_ = H5::H5File(fileName_, H5F_ACC_TRUNC, fcpList); | ^ /usr/include/hdf5/serial/H5File.h:104:5: note: because 'H5::H5File' has user-provided 'H5::H5File::H5File(const H5::H5File&)' 104 | H5File(const H5File &original); | ^~~~~~ /build/reproducible-path/votca-2024/xtp/src/libxtp/checkpoint.cc:83:68: warning: implicitly-declared 'H5::H5File& H5::H5File::operator=(const H5::H5File&)' is deprecated [-Wdeprecated-copy] 83 | fileHandle_ = H5::H5File(fileName_, H5F_ACC_RDWR, fcpList); | ^ /usr/include/hdf5/serial/H5File.h:104:5: note: because 'H5::H5File' has user-provided 'H5::H5File::H5File(const H5::H5File&)' 104 | H5File(const H5File &original); | ^~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/ianalyze.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/calculatorfactory.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/calculatorfactory.cc [ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/filterfactory.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/filterfactory.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gnode.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/kmcmultiple.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/vaverage.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 54%] Linking CXX executable template_serial cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template_serial.dir/link.txt --verbose=1 In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/template_serial.dir/template_serial.cc.o -o template_serial -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../../src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/src/libxtp/classicalsegment.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/bsecoupling.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 54%] Built target template_serial [ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/jobcalculatorfactory.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/jobcalculatorfactory.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/neighborlist.h:30, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/neighborlist.cc:23: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/qmpackagefactory.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/qmpackagefactory.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/cubefile_writer.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/cubefile_writer.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/src/libxtp/ecpaobasis.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:30: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/couplingbase.h:29, from /build/reproducible-path/votca-2024/xtp/src/libxtp/couplingbase.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/eeinteractor.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/eeinteractor.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/src/libxtp/ecpaobasis.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/couplingbase.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dftcoupling.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/dftcoupling.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 54%] Linking CXX executable template_threaded cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template && /usr/bin/cmake -E cmake_link_script CMakeFiles/template_threaded.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/template_threaded.dir/template_threaded.cc.o -o template_threaded -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../../src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PotentialIO; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/src/libxtp/ecpaobasis.cc:152:44: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/activedensitymatrix.h:24, from /build/reproducible-path/votca-2024/xtp/src/libxtp/dftengine/dftengine.cc:32: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/quadrature_factory.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/quadrature_factory.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/activedensitymatrix.h:24, from /build/reproducible-path/votca-2024/xtp/src/libxtp/dftengine/embeddingengine.cc:49: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 54%] Built target template_threaded [ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/sigmafactory.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/sigmafactory.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/esp2multipole.h:34, from /build/reproducible-path/votca-2024/xtp/src/libxtp/esp2multipole.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/calculators/eanalyze.h:36, from /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/calculatorfactory.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o -MF CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o.d -o CMakeFiles/votca_xtp.dir/factories/toolfactory.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/toolfactory.cc [ 54%] Linking CXX executable csg_reupdate cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_reupdate.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -o csg_reupdate -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 54%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/fcddiabatization.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/fcddiabatization.cc.o -MF CMakeFiles/votca_xtp.dir/fcddiabatization.cc.o.d -o CMakeFiles/votca_xtp.dir/fcddiabatization.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/fcddiabatization.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 54%] Built target csg_reupdate [ 55%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_hermite_quadrature.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gaussian_quadrature/gauss_hermite_quadrature.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/erdiabatization.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/erdiabatization.cc:19: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 55%] Linking CXX executable partial_rdf/csg_partial_rdf cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /usr/bin/cmake -E cmake_link_script CMakeFiles/partial_rdf.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -o partial_rdf/csg_partial_rdf -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/espfit.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/espfit.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/jobcalculator.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/jobcalculatorfactory.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/jobcalculatorfactory.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/filterfactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/filterfactory.cc:22: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 55%] Built target partial_rdf make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 55%] Building csg_reupdate manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate --format groff --out csg_reupdate.man /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 55%] Built target csg_reupdate_manpage [ 55%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_laguerre_quadrature.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gaussian_quadrature/gauss_laguerre_quadrature.cc [ 57%] Linking CXX executable csg_boltzmann cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_boltzmann.dir/link.txt --verbose=1 [ 57%] Linking CXX executable unit_test_bondedstatistics cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bondedstatistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_boltzmann.dir/main.cc.o CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o csg_boltzmann -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o unit_test_bondedstatistics -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpackage.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpackagefactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/qmpackagefactory.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o -MF CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussian_quadrature/gauss_legendre_quadrature.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gaussian_quadrature/gauss_legendre_quadrature.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o -MF CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o.d -o CMakeFiles/votca_xtp.dir/gaussianwriter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gaussianwriter.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gmhdiabatization.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gmhdiabatization.cc.o -MF CMakeFiles/votca_xtp.dir/gmhdiabatization.cc.o.d -o CMakeFiles/votca_xtp.dir/gmhdiabatization.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gmhdiabatization.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 57%] Built target unit_test_bondedstatistics make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 57%] Building csg_partial_rdf manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name partial_rdf/csg_partial_rdf --format groff --out partial_rdf.man /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 57%] Built target partial_rdf_manpage [ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gnode.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gnode.cc.o -MF CMakeFiles/votca_xtp.dir/gnode.cc.o.d -o CMakeFiles/votca_xtp.dir/gnode.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gnode.cc [ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/grid.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/grid.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/grid.cc [ 57%] Built target csg_boltzmann [ 57%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o -MF CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/gridbox.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/gridbox.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o -MF CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/radial_euler_maclaurin_rule.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/radial_euler_maclaurin_rule.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 58%] Building csg_boltzmann manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/csg_boltzmann --format groff --out csg_boltzmann.man /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 58%] Built target csg_boltzmann_manpage [ 58%] Linking CXX executable csg_imc_solve cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_imc_solve.dir/link.txt --verbose=1 [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/regular_grid.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/regular_grid.cc /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -o csg_imc_solve -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o -MF CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/sphere_lebedev_rule.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/sphere_lebedev_rule.cc [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o -MF CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o.d -o CMakeFiles/votca_xtp.dir/grids/vxc_grid.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/vxc_grid.cc [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/bse_operator.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/bse_operator.cc [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/bse.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/bse.cc [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gw.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/gw.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/fcddiabatization.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/fcddiabatization.cc:19: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/couplingbase.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dftcoupling.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/coupling.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/factories/toolfactory.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 58%] Built target csg_imc_solve make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 58%] Building csg_imc_solve manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve --format groff --out csg_imc_solve.man [ 58%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gwbse.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/gwbse.cc [ 59%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/gwbseengine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/gwbseengine.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 59%] Built target csg_imc_solve_manpage [ 59%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/ppm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/ppm.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/grid.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/grid.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 59%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/rpa.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/rpa.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 59%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o -MF CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o.d -o CMakeFiles/votca_xtp.dir/gwbse/sigma_base.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/sigma_base.cc [ 59%] Linking CXX executable unit_test_tabulatedpotential cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_tabulatedpotential.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o ../csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -o unit_test_tabulatedpotential -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools ../libcsg/libvotca_csg.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a [ 59%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gyration.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/gyration.cc.o -MF CMakeFiles/votca_xtp.dir/gyration.cc.o.d -o CMakeFiles/votca_xtp.dir/gyration.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/gyration.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gnode.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/gnode.cc:22: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 59%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/job.cc.o /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/job.cc.o -MF CMakeFiles/votca_xtp.dir/job.cc.o.d -o CMakeFiles/votca_xtp.dir/job.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/job.cc [ 59%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/eqm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/jobcalculators/eqm.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 59%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/iexcitoncl.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/jobcalculators/iexcitoncl.cc [ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/iqm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/jobcalculators/iqm.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gaussianwriter.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/gaussianwriter.cc:20: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 61%] Built target unit_test_tabulatedpotential [ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o -MF CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o.d -o CMakeFiles/votca_xtp.dir/jobcalculators/qmmm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/jobcalculators/qmmm.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobtopology.cc.o /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/jobtopology.cc.o -MF CMakeFiles/votca_xtp.dir/jobtopology.cc.o.d -o CMakeFiles/votca_xtp.dir/jobtopology.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/jobtopology.cc [ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/kmccalculator.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/kmccalculator.cc.o -MF CMakeFiles/votca_xtp.dir/kmccalculator.cc.o.d -o CMakeFiles/votca_xtp.dir/kmccalculator.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/kmccalculator.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gmhdiabatization.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/gmhdiabatization.cc:19: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/libint2_calls.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/libint2_calls.cc.o -MF CMakeFiles/votca_xtp.dir/libint2_calls.cc.o.d -o CMakeFiles/votca_xtp.dir/libint2_calls.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/libint2_calls.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/radial_euler_maclaurin_rule.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o -MF CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o.d -o CMakeFiles/votca_xtp.dir/matrixfreeoperator.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/matrixfreeoperator.cc [ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/md2qmengine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/md2qmengine.cc.o -MF CMakeFiles/votca_xtp.dir/md2qmengine.cc.o.d -o CMakeFiles/votca_xtp.dir/md2qmengine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/md2qmengine.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 61%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/mmregion.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/mmregion.cc.o -MF CMakeFiles/votca_xtp.dir/mmregion.cc.o.d -o CMakeFiles/votca_xtp.dir/mmregion.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/mmregion.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 62%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/molden.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/molden.cc.o -MF CMakeFiles/votca_xtp.dir/molden.cc.o.d -o CMakeFiles/votca_xtp.dir/molden.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/molden.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 62%] Linking CXX executable csg_fmatch cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/csg_fmatch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -o csg_fmatch -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools: ../libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/sphere_lebedev_rule.h:32, from /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/sphere_lebedev_rule.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/vxc_grid.cc:23: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 62%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/nbo.cc.o [ 62%] Built target csg_fmatch cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/nbo.cc.o -MF CMakeFiles/votca_xtp.dir/nbo.cc.o.d -o CMakeFiles/votca_xtp.dir/nbo.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/nbo.cc [ 62%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/amplitude_integration.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/numerical_integration/amplitude_integration.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/grids/regular_grid.cc:22: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 62%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/density_integration.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/numerical_integration/density_integration.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 62%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o -MF CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o.d -o CMakeFiles/votca_xtp.dir/numerical_integration/vxc_potential.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/numerical_integration/vxc_potential.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/eeinteractor.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/jobcalculators/iexcitoncl.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/esp2multipole.h:34, from /build/reproducible-path/votca-2024/xtp/src/libxtp/jobcalculators/eqm.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gw.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/gw.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/src/libxtp/jobtopology.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse.h:26, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gwbse.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/gwbseengine.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/bse.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 62%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o -MF CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o.d -o CMakeFiles/votca_xtp.dir/openmp_cuda.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/openmp_cuda.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gnode.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/kmccalculator.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/DependInfo.cmake "--color=" In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 62%] Building csg_fmatch manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch --format groff --out csg_fmatch.man make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 62%] Built target csg_fmatch_manpage [ 62%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbitals.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbitals.cc.o -MF CMakeFiles/votca_xtp.dir/orbitals.cc.o.d -o CMakeFiles/votca_xtp.dir/orbitals.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/orbitals.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gyration.h:30, from /build/reproducible-path/votca-2024/xtp/src/libxtp/gyration.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/region.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/jobtopology.h:27, from /build/reproducible-path/votca-2024/xtp/src/libxtp/jobcalculators/qmmm.cc:34: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/mmregion.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/mmregion.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/gwbse/gwbse.cc:32: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 62%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbreorder.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/orbreorder.cc.o -MF CMakeFiles/votca_xtp.dir/orbreorder.cc.o.d -o CMakeFiles/votca_xtp.dir/orbreorder.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/orbreorder.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpackage.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpackagefactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/libxtp/jobcalculators/iqm.cc:33: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o -MF CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o.d -o CMakeFiles/votca_xtp.dir/parallelxjobcalc.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/parallelxjobcalc.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/md2qmengine.h:27, from /build/reproducible-path/votca-2024/xtp/src/libxtp/md2qmengine.cc:19: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/pmlocalization.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/pmlocalization.cc.o -MF CMakeFiles/votca_xtp.dir/pmlocalization.cc.o.d -o CMakeFiles/votca_xtp.dir/pmlocalization.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/pmlocalization.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarregion.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarregion.cc.o -MF CMakeFiles/votca_xtp.dir/polarregion.cc.o.d -o CMakeFiles/votca_xtp.dir/polarregion.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/polarregion.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarsite.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/polarsite.cc.o -MF CMakeFiles/votca_xtp.dir/polarsite.cc.o.d -o CMakeFiles/votca_xtp.dir/polarsite.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/polarsite.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/molden.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/molden.cc:4: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/src/libxtp/mmregion.cc:54:19: required from 'void votca::xtp::MMRegion::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::ClassicalSegment]' /build/reproducible-path/votca-2024/xtp/src/libxtp/mmregion.cc:78:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/src/libxtp/mmregion.cc:54:19: required from 'void votca::xtp::MMRegion::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::ClassicalSegment]' /build/reproducible-path/votca-2024/xtp/src/libxtp/mmregion.cc:78:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/populationanalysis.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/populationanalysis.cc.o -MF CMakeFiles/votca_xtp.dir/populationanalysis.cc.o.d -o CMakeFiles/votca_xtp.dir/populationanalysis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/populationanalysis.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/jobtopology.cc:351:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/progressobserver.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/progressobserver.cc.o -MF CMakeFiles/votca_xtp.dir/progressobserver.cc.o.d -o CMakeFiles/votca_xtp.dir/progressobserver.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/progressobserver.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/numerical_integration/amplitude_integration.cc:22: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/numerical_integration/density_integration.cc:22: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmatom.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmatom.cc.o -MF CMakeFiles/votca_xtp.dir/qmatom.cc.o.d -o CMakeFiles/votca_xtp.dir/qmatom.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmatom.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 63%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmcalculator.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmcalculator.cc.o -MF CMakeFiles/votca_xtp.dir/qmcalculator.cc.o.d -o CMakeFiles/votca_xtp.dir/qmcalculator.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmcalculator.cc [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmmolecule.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmmolecule.cc.o -MF CMakeFiles/votca_xtp.dir/qmmolecule.cc.o.d -o CMakeFiles/votca_xtp.dir/qmmolecule.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmmolecule.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmnblist.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmnblist.cc.o -MF CMakeFiles/votca_xtp.dir/qmnblist.cc.o.d -o CMakeFiles/votca_xtp.dir/qmnblist.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmnblist.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/eeinteractor.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, from /build/reproducible-path/votca-2024/xtp/src/libxtp/polarregion.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/orbitals.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackage.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackage.cc.o -MF CMakeFiles/votca_xtp.dir/qmpackage.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpackage.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpackage.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/src/libxtp/polarsite.cc:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:30: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbreorder.h:28, from /build/reproducible-path/votca-2024/xtp/src/libxtp/orbreorder.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/pmlocalization.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/pmlocalization.cc:23: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/jobcalculator.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/parallelxjobcalc.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/parallelxjobcalc.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/orbitals.cc:635:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/src/libxtp/orbitals.cc:654:20: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/orbitals.cc:656:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmatom.cc:22: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:30: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmnblist.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o -MF CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpackages/orca.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpackages/orca.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o -MF CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpackages/xtpdft.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpackages/xtpdft.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMPair; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/src/libxtp/qmnblist.cc:45:39: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/populationanalysis.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/populationanalysis.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpair.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmpair.cc.o -MF CMakeFiles/votca_xtp.dir/qmpair.cc.o.d -o CMakeFiles/votca_xtp.dir/qmpair.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpair.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmregion.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmregion.cc.o -MF CMakeFiles/votca_xtp.dir/qmregion.cc.o.d -o CMakeFiles/votca_xtp.dir/qmregion.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmregion.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmmolecule.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:27: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 64%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmstate.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmstate.cc.o -MF CMakeFiles/votca_xtp.dir/qmstate.cc.o.d -o CMakeFiles/votca_xtp.dir/qmstate.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmstate.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmmolecule.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 66%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmtool.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/qmtool.cc.o -MF CMakeFiles/votca_xtp.dir/qmtool.cc.o.d -o CMakeFiles/votca_xtp.dir/qmtool.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/qmtool.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 66%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/rate_engine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/rate_engine.cc.o -MF CMakeFiles/votca_xtp.dir/rate_engine.cc.o.d -o CMakeFiles/votca_xtp.dir/rate_engine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/rate_engine.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 66%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/region.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/region.cc.o -MF CMakeFiles/votca_xtp.dir/region.cc.o.d -o CMakeFiles/votca_xtp.dir/region.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/region.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpackage.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 66%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segment.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segment.cc.o -MF CMakeFiles/votca_xtp.dir/segment.cc.o.d -o CMakeFiles/votca_xtp.dir/segment.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/segment.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 66%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segmentmapper.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/segmentmapper.cc.o -MF CMakeFiles/votca_xtp.dir/segmentmapper.cc.o.d -o CMakeFiles/votca_xtp.dir/segmentmapper.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/segmentmapper.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /usr/include/libint2/engine.impl.h:34, from /usr/include/libint2/engine.h:1020, from /usr/include/libint2/cxxapi.h:45, from /usr/include/libint2.hpp:24, from /build/reproducible-path/votca-2024/xtp/src/libxtp/libint2_calls.cc:30: /usr/include/libint2/boys.h: In constructor 'libint2::TennoGmEval::TennoGmEval(unsigned int, Real)': /usr/include/libint2/boys.h:875: note: '-Wmisleading-indentation' is disabled from this point onwards, since column-tracking was disabled due to the size of the code/headers 875 | if (mmax > cheb_table_mmax) | /usr/include/libint2/boys.h:875: note: adding '-flarge-source-files' will allow for more column-tracking support, at the expense of compilation time and memory /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 66%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o -MF CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o.d -o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_cda.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/self_energy_evaluators/sigma_cda.cc [ 66%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o -MF CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o.d -o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_exact.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/self_energy_evaluators/sigma_exact.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpair.cc:23: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/hist.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmregion.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmregion.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 66%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o -MF CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o.d -o CMakeFiles/votca_xtp.dir/self_energy_evaluators/sigma_ppm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/self_energy_evaluators/sigma_ppm.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpackages/orca.cc:40: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/src/libxtp/segment.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/eeinteractor.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/polarregion.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/region.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/rate_engine.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/rate_engine.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/src/libxtp/segment.cc:43:34: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/segment.cc:46:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/src/libxtp/segment.cc:43:34: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/stateapplication.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/stateapplication.cc.o -MF CMakeFiles/votca_xtp.dir/stateapplication.cc.o.d -o CMakeFiles/votca_xtp.dir/stateapplication.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/stateapplication.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dftengine.h:30, from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpackages/xtpdft.h:28, from /build/reproducible-path/votca-2024/xtp/src/libxtp/qmpackages/xtpdft.cc:33: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilter_base.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilter_base.cc.o -MF CMakeFiles/votca_xtp.dir/statefilter_base.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilter_base.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilter_base.cc [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/DeltaQ_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/DeltaQ_filter.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Density_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Density_filter.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segmentmapper.h:30, from /build/reproducible-path/votca-2024/xtp/src/libxtp/segmentmapper.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Localisation_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Localisation_filter.cc [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/OscillatorStrength_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gw.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/self_energy_evaluators/sigma_cda.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 67%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o -MF CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o.d -o CMakeFiles/votca_xtp.dir/statefilters/Overlap_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Overlap_filter.cc [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statesaver.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statesaver.cc.o -MF CMakeFiles/votca_xtp.dir/statesaver.cc.o.d -o CMakeFiles/votca_xtp.dir/statesaver.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/statesaver.cc [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statetracker.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/statetracker.cc.o -MF CMakeFiles/votca_xtp.dir/statetracker.cc.o.d -o CMakeFiles/votca_xtp.dir/statetracker.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/statetracker.cc [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/staticsite.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/staticsite.cc.o -MF CMakeFiles/votca_xtp.dir/staticsite.cc.o.d -o CMakeFiles/votca_xtp.dir/staticsite.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/staticsite.cc [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o -MF CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o.d -o CMakeFiles/votca_xtp.dir/symmetric_matrix.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/symmetric_matrix.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/stateapplication.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/stateapplication.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/threecenter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/threecenter.cc.o -MF CMakeFiles/votca_xtp.dir/threecenter.cc.o.d -o CMakeFiles/votca_xtp.dir/threecenter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/threecenter.cc [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/apdft.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/apdft.cc.o -MF CMakeFiles/votca_xtp.dir/tools/apdft.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/apdft.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/apdft.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o -MF CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/dftgwbse.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/dftgwbse.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 68%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/diabatization.cc.o In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilter_base.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/diabatization.cc.o -MF CMakeFiles/votca_xtp.dir/tools/diabatization.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/diabatization.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/diabatization.cc [ 70%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gencube.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gencube.cc.o -MF CMakeFiles/votca_xtp.dir/tools/gencube.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/gencube.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/gencube.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 70%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o -MF CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/gpu_benchmark.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/gpu_benchmark.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/populationanalysis.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/DeltaQ_filter.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Density_filter.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Density_filter.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 70%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o -MF CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/mol2orb.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/mol2orb.cc [ 70%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/molpol.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/molpol.cc.o -MF CMakeFiles/votca_xtp.dir/tools/molpol.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/molpol.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/molpol.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 70%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o -MF CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/orb2fchk.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/orb2fchk.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 70%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o -MF CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/orb2mol.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/orb2mol.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/OscillatorStrength_filter.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 70%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o -MF CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o.d -o CMakeFiles/votca_xtp.dir/tools/spectrum.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/spectrum.cc [ 70%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/topology.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/topology.cc.o -MF CMakeFiles/votca_xtp.dir/topology.cc.o.d -o CMakeFiles/votca_xtp.dir/topology.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/topology.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Density_filter.cc:68:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statesaver.h:29, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statesaver.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/src/libxtp/staticsite.cc:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:30: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 71%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/transition_densities.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/transition_densities.cc.o -MF CMakeFiles/votca_xtp.dir/transition_densities.cc.o.d -o CMakeFiles/votca_xtp.dir/transition_densities.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/transition_densities.cc [ 71%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/trustregion.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/trustregion.cc.o -MF CMakeFiles/votca_xtp.dir/trustregion.cc.o.d -o CMakeFiles/votca_xtp.dir/trustregion.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/trustregion.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/populationanalysis.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Localisation_filter.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 71%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/version.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/version.cc.o -MF CMakeFiles/votca_xtp.dir/version.cc.o.d -o CMakeFiles/votca_xtp.dir/version.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/version.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/OscillatorStrength_filter.cc:56:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Overlap_filter.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Overlap_filter.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 71%] Building CXX object xtp/src/libxtp/CMakeFiles/votca_xtp.dir/xtpapplication.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/build/reproducible-path/votca-2024/xtp/src/libxtp -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fPIC -fopenmp -MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/xtpapplication.cc.o -MF CMakeFiles/votca_xtp.dir/xtpapplication.cc.o.d -o CMakeFiles/votca_xtp.dir/xtpapplication.cc.o -c /build/reproducible-path/votca-2024/xtp/src/libxtp/xtpapplication.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statetracker.h:29, from /build/reproducible-path/votca-2024/xtp/src/libxtp/statetracker.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/eeinteractor.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/polarregion.h:25, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/molpol.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/statefilters/Overlap_filter.cc:174:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/apdft.cc:23: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpackage.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpackagefactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/dftgwbse.cc:23: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/cubefile_writer.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/gencube.cc:33: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/diabatization.h:29, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/diabatization.cc:18: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/gpu_benchmark.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/molden.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/mol2orb.cc:7: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:36, from /build/reproducible-path/votca-2024/xtp/src/libxtp/topology.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:29: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbreorder.h:28, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/orb2mol.h:28, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/orb2mol.cc:1: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gaussianwriter.h:26, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/orb2fchk.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/transition_densities.h:29, from /build/reproducible-path/votca-2024/xtp/src/libxtp/transition_densities.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/libxtp/tools/spectrum.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/topology.cc:185:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/src/libxtp/topology.cc:186:4: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 71%] Linking CXX shared library libvotca_xtp.so cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/cmake -E cmake_link_script CMakeFiles/votca_xtp.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libvotca_xtp.so.2024 -o libvotca_xtp.so.2024 CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o 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../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libxc.a /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_system.so.1.83.0 /usr/lib/x86_64-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a -lm /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp && /usr/bin/cmake -E cmake_symlink_library libvotca_xtp.so.2024 libvotca_xtp.so.2024 libvotca_xtp.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 71%] Built target votca_xtp make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/depend make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/depend make -f xtp/src/tools/CMakeFiles/xtp_run.dir/build.make xtp/src/tools/CMakeFiles/xtp_run.dir/depend make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_adiis.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_bse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu 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xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests 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/build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu 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make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 71%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o [ 71%] Building CXX object xtp/src/tools/CMakeFiles/xtp_map.dir/xtp_map.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 71%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 71%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o [ 72%] Building CXX object xtp/src/tools/CMakeFiles/xtp_run.dir/xtp_run.cc.o [ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o [ 72%] Building CXX object xtp/src/tools/CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tools/CMakeFiles/xtp_map.dir/xtp_map.cc.o -MF CMakeFiles/xtp_map.dir/xtp_map.cc.o.d -o CMakeFiles/xtp_map.dir/xtp_map.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tools/xtp_map.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -MF CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o.d -o CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_adiis.cc make -f xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -MF CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o.d -o CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_aomatrix.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tools/CMakeFiles/xtp_run.dir/xtp_run.cc.o -MF CMakeFiles/xtp_run.dir/xtp_run.cc.o.d -o CMakeFiles/xtp_run.dir/xtp_run.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tools/xtp_run.cc [ 72%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_atom.dir/test_atom.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tools/CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -MF CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o.d -o CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tools/xtp_parallel.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o -MF CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o.d -o CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_aotransform.cc [ 74%] Building CXX object xtp/src/tools/CMakeFiles/xtp_tools.dir/xtp_tools.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -MF CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o.d -o CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_aobasis.cc make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o -MF CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o.d -o CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_aomatrix3d.cc make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o -MF CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o.d -o CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_aopotential.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_atom.dir/test_atom.cc.o -MF CMakeFiles/unit_test_atom.dir/test_atom.cc.o.d -o CMakeFiles/unit_test_atom.dir/test_atom.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_atom.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o -MF CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o.d -o CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_qmatom.cc make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -MF CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o.d -o CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_qmmolecule.cc make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bse.dir/test_bse.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o -MF CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o.d -o CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_polarsegment.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tools/CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -MF CMakeFiles/xtp_tools.dir/xtp_tools.cc.o.d -o CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tools/xtp_tools.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -MF CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o.d -o CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_bfgs_trm.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -MF CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o.d -o CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_bseoperator_btda.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_bse.dir/test_bse.cc.o -MF CMakeFiles/unit_test_bse.dir/test_bse.cc.o.d -o CMakeFiles/unit_test_bse.dir/test_bse.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_bse.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o -MF CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o.d -o CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_basisset.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -MF CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o.d -o CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_convergenceacc.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -MF CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o.d -o CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_dftcoupling.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eris.dir/test_eris.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_glink.dir/test_glink.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -MF CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o.d -o CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_cubefile_writer.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -MF CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o.d -o CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_hdf5.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -MF CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o.d -o CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_ecpaobasis.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -MF CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o.d -o CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_eigen.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o -MF CMakeFiles/unit_test_diis.dir/test_diis.cc.o.d -o CMakeFiles/unit_test_diis.dir/test_diis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_diis.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_eris.dir/test_eris.cc.o -MF CMakeFiles/unit_test_eris.dir/test_eris.cc.o.d -o CMakeFiles/unit_test_eris.dir/test_eris.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_eris.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_glink.dir/test_glink.cc.o -MF CMakeFiles/unit_test_glink.dir/test_glink.cc.o.d -o CMakeFiles/unit_test_glink.dir/test_glink.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_glink.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -MF CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o.d -o CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_espfit.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -MF CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o.d -o CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_densityintegration.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -MF CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o.d -o CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_ppm.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ 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-I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -MF CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o.d -o CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_vxc_grid.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o -MF CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o.d -o CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_vxc_potential.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -MF CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o.d -o CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_qmpair.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -MF CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o.d -o CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_staticsite.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -MF CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o.d -o CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_orbitals.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o -MF CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o.d -o CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_qmstate.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -MF CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o.d -o CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_polarsite.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -MF CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o.d -o CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_qmnblist.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -MF CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o.d -o CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_radial_euler_maclaurin_rule.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -MF CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o.d -o CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_rpa_h2p.cc [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -MF CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o.d -o CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_rpa.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_ecpaobasis.cc:17: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_qmmolecule.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_polarsegment.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/espfit.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_espfit.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/src/tests/test_qmnblist.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/src/tests/test_qmpair.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/src/tests/test_qmmolecule.cc:90:17: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/src/tests/test_hdf5.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/src/tests/test_qmmolecule.cc:90:17: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 74%] Linking CXX executable unit_test_glink cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_glink.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_glink.dir/test_glink.cc.o -o unit_test_glink -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/stateapplication.h:26, from /build/reproducible-path/votca-2024/xtp/src/tools/xtp_run.cc:23: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 74%] Linking CXX executable xtp_tools cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_tools.dir/link.txt --verbose=1 In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_tools.dir/xtp_tools.cc.o -o xtp_tools -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2024 ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 74%] Built target unit_test_glink make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segment.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 74%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_segment.dir/test_segment.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_segment.dir/test_segment.cc.o -MF CMakeFiles/unit_test_segment.dir/test_segment.cc.o.d -o CMakeFiles/unit_test_segment.dir/test_segment.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_segment.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/md2qmengine.h:27, from /build/reproducible-path/votca-2024/xtp/src/tools/xtp_map.cc:34: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmnblist.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/topology.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/jobcalculator.h:32, from /build/reproducible-path/votca-2024/xtp/src/tools/xtp_parallel.cc:21: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/src/tests/test_polarsegment.cc:161:17: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Linking CXX executable unit_test_qmstate cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmstate.dir/link.txt --verbose=1 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o -o unit_test_qmstate -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 75%] Linking CXX executable unit_test_atom cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_atom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_atom.dir/test_atom.cc.o -o unit_test_atom -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/src/tests/test_polarsegment.cc:161:17: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 75%] Built target xtp_tools make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/depend [ 76%] Linking CXX executable unit_test_qmatom cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmatom.dir/link.txt --verbose=1 make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o -o unit_test_qmatom -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -MF CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o.d -o CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_aoshell.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_convergenceacc.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_ppm.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_vxc_grid.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/couplingbase.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dftcoupling.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_dftcoupling.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_radial_euler_maclaurin_rule.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 76%] Built target unit_test_qmstate make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/DependInfo.cmake "--color=" In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_bse.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -MF CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o.d -o CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_sphere_lebedev_rule.cc [ 76%] Built target unit_test_atom make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 76%] Built target unit_test_qmatom make -f xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o -MF CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o.d -o CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_symmetric_matrix.cc [ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o -MF CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o.d -o CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_statetracker.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_basisset.cc:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_aotransform.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/aopotential.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_aopotential.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/cubefile_writer.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_cubefile_writer.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_rpa_h2p.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_aobasis.cc:32: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_regular_grid.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_aomatrix.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_orbitals.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_aomatrix3d.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_rpa.cc:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_eris.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_vxc_potential.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 76%] Linking CXX executable unit_test_adiis cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_adiis.dir/link.txt --verbose=1 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_adiis.dir/test_adiis.cc.o -o unit_test_adiis -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 76%] Built target unit_test_adiis make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/DependInfo.cmake "--color=" /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 76%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o -MF CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o.d -o CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_threecenter_dft.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 76%] Linking CXX executable xtp_run cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_run.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_run.dir/xtp_run.cc.o -o xtp_run -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2024 ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_densityintegration.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 76%] Built target xtp_run make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/DependInfo.cmake "--color=" /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 77%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o -MF CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o.d -o CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_threecenter_gwbse.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/src/tests/test_hdf5.cc:246:17: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/src/tests/test_hdf5.cc:246:17: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 79%] Linking CXX executable unit_test_diis cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_diis.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_diis.dir/test_diis.cc.o -o unit_test_diis -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 80%] Linking CXX executable unit_test_qmpair cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmpair.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmpair.dir/test_qmpair.cc.o -o unit_test_qmpair -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 80%] Built target unit_test_diis make -f xtp/src/tests/CMakeFiles/unit_test_topology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_topology.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_topology.dir/DependInfo.cmake "--color=" /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_topology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_topology.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_topology.dir/test_topology.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_topology.dir/test_topology.cc.o -MF CMakeFiles/unit_test_topology.dir/test_topology.cc.o.d -o CMakeFiles/unit_test_topology.dir/test_topology.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_topology.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 80%] Built target unit_test_qmpair make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -MF CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o.d -o CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_sigma_exact.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 80%] Linking CXX executable unit_test_qmmolecule cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmmolecule.dir/link.txt --verbose=1 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o -o unit_test_qmmolecule -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/src/tests/test_segment.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 80%] Built target unit_test_qmmolecule make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -MF CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o.d -o CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_sigma_ppm.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 80%] Linking CXX executable xtp_parallel cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_parallel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_parallel.dir/xtp_parallel.cc.o -o xtp_parallel -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2024 ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 80%] Built target xtp_parallel make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 80%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -MF CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o.d -o CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_sigma_cda.cc [ 81%] Linking CXX executable unit_test_polarsite cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_polarsite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o -o unit_test_polarsite -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 81%] Linking CXX executable unit_test_basisset cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_basisset.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o -o unit_test_basisset -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 81%] Linking CXX executable unit_test_staticsite cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_staticsite.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_staticsite.dir/test_staticsite.cc.o -o unit_test_staticsite -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 81%] Linking CXX executable unit_test_qmnblist cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmnblist.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmnblist.dir/test_qmnblist.cc.o -o unit_test_qmnblist -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 81%] Built target unit_test_basisset make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gw.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 81%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o -MF CMakeFiles/unit_test_gw.dir/test_gw.cc.o.d -o CMakeFiles/unit_test_gw.dir/test_gw.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_gw.cc [ 81%] Built target unit_test_polarsite make -f xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 81%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o -MF CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o.d -o CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_bse_operator.cc [ 81%] Linking CXX executable unit_test_aotransform cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aotransform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o -o unit_test_aotransform -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 81%] Built target unit_test_staticsite make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_davidson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 81%] Built target unit_test_qmnblist make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/DependInfo.cmake "--color=" [ 81%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o -MF CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o.d -o CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_davidson.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 81%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o -MF CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o.d -o CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_trustregion.cc [ 81%] Linking CXX executable unit_test_bfgs_trm cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bfgs_trm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o -o unit_test_bfgs_trm -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 81%] Built target unit_test_aotransform make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 83%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -MF CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o.d -o CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_gnode.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 83%] Built target unit_test_bfgs_trm make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 84%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -MF CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o.d -o CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_vc2index.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_aoshell.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_sphere_lebedev_rule.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statetracker.h:29, from /build/reproducible-path/votca-2024/xtp/src/tests/test_statetracker.cc:33: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_threecenter_dft.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/src/tests/test_topology.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 84%] Linking CXX executable unit_test_vxc_grid cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vxc_grid.dir/link.txt --verbose=1 [ 84%] Linking CXX executable unit_test_polarsegment cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_polarsegment.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vxc_grid.dir/test_vxc_grid.cc.o -o unit_test_vxc_grid -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o -o unit_test_polarsegment -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_threecenter_gwbse.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 84%] Linking CXX executable unit_test_symmetric_matrix cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_symmetric_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o -o unit_test_symmetric_matrix -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 84%] Linking CXX executable unit_test_ecpaobasis cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_ecpaobasis.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_ecpaobasis.dir/test_ecpaobasis.cc.o -o unit_test_ecpaobasis -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 84%] Built target unit_test_vxc_grid make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_grid.dir/DependInfo.cmake "--color=" [ 84%] Built target unit_test_polarsegment make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 84%] Built target unit_test_symmetric_matrix make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 85%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o -MF CMakeFiles/unit_test_grid.dir/test_grid.cc.o.d -o CMakeFiles/unit_test_grid.dir/test_grid.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_grid.cc [ 85%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -MF CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o.d -o CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_segmentmapper.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 85%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -MF CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o.d -o CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_eeinteractor.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 85%] Built target unit_test_ecpaobasis make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_hist.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 85%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_hist.dir/test_hist.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_hist.dir/test_hist.cc.o -MF CMakeFiles/unit_test_hist.dir/test_hist.cc.o.d -o CMakeFiles/unit_test_hist.dir/test_hist.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_hist.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 85%] Linking CXX executable unit_test_eris cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eris.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eris.dir/test_eris.cc.o -o unit_test_eris -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 85%] Linking CXX executable unit_test_cubefile_writer cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_cubefile_writer.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_cubefile_writer.dir/test_cubefile_writer.cc.o -o unit_test_cubefile_writer -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_sigma_exact.cc:33: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_sigma_ppm.cc:33: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 85%] Built target unit_test_eris make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 85%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -MF CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o.d -o CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_qmfragment.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 85%] Built target unit_test_cubefile_writer make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 85%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o -MF CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o.d -o CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_jobtopology.cc [ 87%] Linking CXX executable unit_test_bseoperator_btda cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bseoperator_btda.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o -o unit_test_bseoperator_btda -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_sigma_cda.cc:33: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 88%] Linking CXX executable unit_test_rpa cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rpa.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o -o unit_test_rpa -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gnode.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_gnode.cc:32: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 88%] Built target unit_test_bseoperator_btda make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/DependInfo.cmake "--color=" In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -MF CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o.d -o CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_dipoledipoleinteraction.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gw.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_gw.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 88%] Linking CXX executable unit_test_radial_euler_maclaurin_rule cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/test_radial_euler_maclaurin_rule.cc.o -o unit_test_radial_euler_maclaurin_rule -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 88%] Linking CXX executable unit_test_segment cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_segment.dir/link.txt --verbose=1 [ 88%] Linking CXX executable unit_test_espfit [ 88%] Linking CXX executable unit_test_vxc_potential cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vxc_potential.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_espfit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_segment.dir/test_segment.cc.o -o unit_test_segment -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vxc_potential.dir/test_vxc_potential.cc.o -o unit_test_vxc_potential -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_espfit.dir/test_espfit.cc.o -o unit_test_espfit -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 88%] Built target unit_test_rpa make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/depend /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 88%] Linking CXX executable unit_test_aobasis cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aobasis.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o -o unit_test_aobasis -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -MF CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o.d -o CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_populationanalysis.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_bse_operator.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 88%] Linking CXX executable unit_test_vc2index cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_vc2index.dir/link.txt --verbose=1 In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_vc2index.dir/test_vc2index.cc.o -o unit_test_vc2index -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/hist.h:25, from /build/reproducible-path/votca-2024/xtp/src/tests/test_hist.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Built target unit_test_segment make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orca.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 88%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o [ 88%] Built target unit_test_vc2index make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o -MF CMakeFiles/unit_test_orca.dir/test_orca.cc.o.d -o CMakeFiles/unit_test_orca.dir/test_orca.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_orca.cc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Linking CXX executable unit_test_trustregion cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_trustregion.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -MF CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o.d -o CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_dftengine.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o -o unit_test_trustregion -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 88%] Built target unit_test_radial_euler_maclaurin_rule make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/DependInfo.cmake "--color=" [ 88%] Built target unit_test_espfit make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Built target unit_test_vxc_potential make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/DependInfo.cmake "--color=" [ 88%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -MF CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o.d -o CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_bsecoupling.cc [ 88%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -MF CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o.d -o CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_rate_engine.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -MF CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o.d -o CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_DeltaQ_filter.cc [ 88%] Linking CXX executable unit_test_aomatrix3d [ 88%] Linking CXX executable unit_test_orbitals cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orbitals.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aomatrix3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orbitals.dir/test_orbitals.cc.o -o unit_test_orbitals -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o -o unit_test_aomatrix3d -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ [ 88%] Linking CXX executable unit_test_regular_grid In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_regular_grid.dir/link.txt --verbose=1 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 88%] Linking CXX executable unit_test_rpa_h2p /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_regular_grid.dir/test_regular_grid.cc.o -o unit_test_regular_grid -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rpa_h2p.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o -o unit_test_rpa_h2p -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Built target unit_test_aobasis In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmmolecule.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/grid.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_grid.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 88%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -MF CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o.d -o CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_oscillatorstrength_filter.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 89%] Linking CXX executable unit_test_densityintegration cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_densityintegration.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_densityintegration.dir/test_densityintegration.cc.o -o unit_test_densityintegration -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 89%] Built target unit_test_trustregion make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/DependInfo.cmake "--color=" /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -MF CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o.d -o CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_localisation_filter.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Built target unit_test_aomatrix3d make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/DependInfo.cmake "--color=" [ 89%] Built target unit_test_orbitals make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -MF CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o.d -o CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_density_filter.cc [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -MF CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o.d -o CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_overlap_filter.cc [ 89%] Linking CXX executable unit_test_aomatrix cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aomatrix.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o -o unit_test_aomatrix -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 89%] Built target unit_test_regular_grid make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/depend make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Linking CXX executable unit_test_dftcoupling cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dftcoupling.dir/link.txt --verbose=1 [ 89%] Built target unit_test_rpa_h2p make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o -o unit_test_dftcoupling -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -MF CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o.d -o CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_newton_rapson.cc [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -MF CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o.d -o CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_indexparser.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/eeinteractor.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, from /build/reproducible-path/votca-2024/xtp/src/tests/test_eeinteractor.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 89%] Built target unit_test_densityintegration make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o -MF CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o.d -o CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_orbreorder.cc [ 89%] Linking CXX executable unit_test_topology cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_topology.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_topology.dir/test_topology.cc.o -o unit_test_topology -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Built target unit_test_aomatrix make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_molden.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_molden.dir/test_molden.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_molden.dir/test_molden.cc.o -MF CMakeFiles/unit_test_molden.dir/test_molden.cc.o.d -o CMakeFiles/unit_test_molden.dir/test_molden.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_molden.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/hist.h:101:4: required from 'void votca::xtp::hist::WriteMetric(const T&, std::string, votca::xtp::CheckpointWriter&) const [with T = double; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/hist.h:68:7: required from 'void votca::xtp::hist::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = double]' /build/reproducible-path/votca-2024/xtp/src/tests/test_hist.cc:50:17: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmfragment.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_qmfragment.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ [ 89%] Linking CXX executable xtp_map /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/xtp_map.dir/link.txt --verbose=1 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/xtp_map.dir/xtp_map.cc.o -o xtp_map -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial: ../libxtp/libvotca_xtp.so.2024 ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Built target unit_test_dftcoupling make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -MF CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o.d -o CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_gaussianwriter.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Built target unit_test_topology make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -MF CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o.d -o CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_incrementalfockbuilder.cc [ 89%] Linking CXX executable unit_test_hdf5 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_hdf5.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_hdf5.dir/test_hdf5.cc.o -o unit_test_hdf5 -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 89%] Built target xtp_map make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build [ 89%] Built target unit_test_hdf5 make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/DependInfo.cmake "--color=" [ 89%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -MF CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o.d -o CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_parallelism.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -MF CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o.d -o CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_anderson.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segmentmapper.h:30, from /build/reproducible-path/votca-2024/xtp/src/tests/test_segmentmapper.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 90%] Linking CXX executable unit_test_threecenter_dft cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_threecenter_dft.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_threecenter_dft.dir/test_threecenter_dft.cc.o -o unit_test_threecenter_dft -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 90%] Linking CXX executable unit_test_aopotential cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aopotential.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o -o unit_test_aopotential -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 90%] Linking CXX executable unit_test_sphere_lebedev_rule cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sphere_lebedev_rule.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o -o unit_test_sphere_lebedev_rule -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 90%] Linking CXX executable unit_test_threecenter_gwbse cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_threecenter_gwbse.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o -o unit_test_threecenter_gwbse -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/classicalsegment.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/eeinteractor.h:25, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dipoledipoleinteraction.h:23, from /build/reproducible-path/votca-2024/xtp/src/tests/test_dipoledipoleinteraction.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 90%] Linking CXX executable unit_test_bse cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bse.dir/link.txt --verbose=1 [ 90%] Built target unit_test_threecenter_dft make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/DependInfo.cmake "--color=" /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bse.dir/test_bse.cc.o -o unit_test_bse -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -MF CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o.d -o CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_gaussian_quadratures.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/region.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/jobtopology.h:27, from /build/reproducible-path/votca-2024/xtp/src/tests/test_jobtopology.cc:24: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 90%] Built target unit_test_aopotential make -f xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/build.make xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/build.make xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 90%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/test_pmlocalization.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/test_pmlocalization.cc.o -MF CMakeFiles/unit_test_pmlocalization.dir/test_pmlocalization.cc.o.d -o CMakeFiles/unit_test_pmlocalization.dir/test_pmlocalization.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_pmlocalization.cc In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 90%] Built target unit_test_threecenter_gwbse make -f xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 92%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/test_activedensitymatrix.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/test_activedensitymatrix.cc.o -MF CMakeFiles/unit_test_activedensitymatrix.dir/test_activedensitymatrix.cc.o.d -o CMakeFiles/unit_test_activedensitymatrix.dir/test_activedensitymatrix.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_activedensitymatrix.cc /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 92%] Built target unit_test_sphere_lebedev_rule make -f xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 92%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/test_activedftengine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/test_activedftengine.cc.o -MF CMakeFiles/unit_test_activedftengine.dir/test_activedftengine.cc.o.d -o CMakeFiles/unit_test_activedftengine.dir/test_activedftengine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_activedftengine.cc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 92%] Built target unit_test_bse make -f xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/DependInfo.cmake "--color=" /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 92%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/test_truncdftengine.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/test_truncdftengine.cc.o -MF CMakeFiles/unit_test_truncdftengine.dir/test_truncdftengine.cc.o.d -o CMakeFiles/unit_test_truncdftengine.dir/test_truncdftengine.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_truncdftengine.cc [ 93%] Linking CXX executable unit_test_statetracker cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_statetracker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o -o unit_test_statetracker -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 93%] Linking CXX executable unit_test_aoshell cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_aoshell.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o -o unit_test_aoshell -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 93%] Linking CXX executable unit_test_qmfragment cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_qmfragment.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_qmfragment.dir/test_qmfragment.cc.o -o unit_test_qmfragment -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 93%] Linking CXX executable unit_test_grid cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_grid.dir/test_grid.cc.o -o unit_test_grid -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 93%] Built target unit_test_statetracker make -f xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 93%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/test_diabatization.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/test_diabatization.cc.o -MF CMakeFiles/unit_test_diabatization.dir/test_diabatization.cc.o.d -o CMakeFiles/unit_test_diabatization.dir/test_diabatization.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_diabatization.cc [ 93%] Linking CXX executable unit_test_convergenceacc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_convergenceacc.dir/link.txt --verbose=1 [ 93%] Linking CXX executable unit_test_gnode cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gnode.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o -o unit_test_convergenceacc -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o -o unit_test_gnode -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/segment.h:30, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/qmpair.h:32, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/rate_engine.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_rate_engine.cc:25: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 93%] Linking CXX executable unit_test_hist cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_hist.dir/link.txt --verbose=1 [ 93%] Built target unit_test_aoshell make -f xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/build.make xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/DependInfo.cmake "--color=" [ 93%] Built target unit_test_qmfragment make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_hist.dir/test_hist.cc.o -o unit_test_hist -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/build.make xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 93%] Building CXX object xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/test_transition_densities.cc.o cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TEST_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_DYN_LINK -DBOOST_UNIT_TEST_FRAMEWORK_NO_LIB -DXTP_TEST_DATA_FOLDER=\"/build/reproducible-path/votca-2024/xtp/src/tests/DataFiles\" -I/build/reproducible-path/votca-2024/xtp/include -I/usr/include/hdf5/serial -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/include/votca/xtp -I/build/reproducible-path/votca-2024/csg/include -I/build/reproducible-path/votca-2024/tools/include -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include/votca/tools -I/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/include -isystem /usr/include/eigen3 -isystem /usr/include/libecpint -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -fopenmp -MD -MT xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/test_transition_densities.cc.o -MF CMakeFiles/unit_test_transition_densities.dir/test_transition_densities.cc.o.d -o CMakeFiles/unit_test_transition_densities.dir/test_transition_densities.cc.o -c /build/reproducible-path/votca-2024/xtp/src/tests/test_transition_densities.cc [ 93%] Building xtp_parallel manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name xtp_parallel --format groff --out xtp_parallel.man make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 93%] Built target unit_test_gnode make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 93%] Built target xtp_parallel_manpage make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/DependInfo.cmake "--color=" /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 94%] Building xtp_map manpage make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name xtp_map --format groff --out xtp_map.man [ 94%] Building xtp_run manpage make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name xtp_run --format groff --out xtp_run.man [ 94%] Built target unit_test_grid make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/DependInfo.cmake "--color=" /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 94%] Building xtp_tools manpage cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name xtp_tools --format groff --out xtp_tools.man /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 94%] Built target xtp_run_manpage [ 94%] Built target xtp_tools_manpage make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 94%] Built target xtp_map_manpage make -f CMakeFiles/manpages.dir/build.make CMakeFiles/manpages.dir/depend make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/CMakeFiles/manpages.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f CMakeFiles/manpages.dir/build.make CMakeFiles/manpages.dir/build make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'CMakeFiles/manpages.dir/build'. make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 94%] Built target manpages make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 94%] Built target unit_test_convergenceacc make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 94%] Built target unit_test_hist /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 94%] Linking CXX executable unit_test_newton_rapson cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_newton_rapson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o -o unit_test_newton_rapson -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 94%] Linking CXX executable unit_test_indexparser cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_indexparser.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o -o unit_test_indexparser -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 94%] Built target unit_test_newton_rapson /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::PolarSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/populationanalysis.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_populationanalysis.cc:32: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::PolarSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_orca.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 94%] Built target unit_test_indexparser /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::Atom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/couplingbase.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bsecoupling.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_bsecoupling.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::Atom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/filterfactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/tests/test_oscillatorstrength_filter.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/filterfactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/tests/test_localisation_filter.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/filterfactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/tests/test_density_filter.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/filterfactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/tests/test_DeltaQ_filter.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/statefilter_base.h:33, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/filterfactory.h:28, from /build/reproducible-path/votca-2024/xtp/src/tests/test_overlap_filter.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dftengine.h:30, from /build/reproducible-path/votca-2024/xtp/src/tests/test_dftengine.cc:28: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 94%] Linking CXX executable unit_test_sigma_exact [ 94%] Linking CXX executable unit_test_sigma_ppm cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_exact.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_ppm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 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/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o -o unit_test_sigma_ppm -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 96%] Linking CXX executable unit_test_parallelism cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_parallelism.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o -o unit_test_parallelism -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_orbreorder.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 96%] Built target unit_test_parallelism [ 96%] Built target unit_test_sigma_exact /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 96%] Built target unit_test_sigma_ppm /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/molden.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_molden.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/gaussianwriter.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_gaussianwriter.cc:32: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 97%] Linking CXX executable unit_test_sigma_cda cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_sigma_cda.dir/link.txt --verbose=1 In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o -o unit_test_sigma_cda -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 97%] Linking CXX executable unit_test_incrementalfockbuilder cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_incrementalfockbuilder.dir/link.txt --verbose=1 [ 97%] Linking CXX executable unit_test_gw cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gw.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o -o unit_test_incrementalfockbuilder -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gw.dir/test_gw.cc.o -o unit_test_gw -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::StaticSite; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::StaticSite]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 97%] Built target unit_test_sigma_cda make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 97%] Built target unit_test_incrementalfockbuilder [ 97%] Linking CXX executable unit_test_jobtopology cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_jobtopology.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o -o unit_test_jobtopology -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dftengine.h:30, from /build/reproducible-path/votca-2024/xtp/src/tests/test_activedftengine.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 98%] Linking CXX executable unit_test_bse_operator [ 98%] Linking CXX executable unit_test_rate_engine cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bse_operator.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_rate_engine.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o -o unit_test_rate_engine -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o -o unit_test_bse_operator -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 98%] Built target unit_test_gw make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_jobtopology /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 98%] Linking CXX executable unit_test_anderson cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_anderson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o -o unit_test_anderson -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/activedensitymatrix.h:24, from /build/reproducible-path/votca-2024/xtp/src/tests/test_activedensitymatrix.cc:29: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/src/tests/test_pmlocalization.cc:30: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ [ 98%] Built target unit_test_rate_engine In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/ecpaobasis.h:24, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/dftengine.h:30, from /build/reproducible-path/votca-2024/xtp/src/tests/test_truncdftengine.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/transition_densities.h:29, from /build/reproducible-path/votca-2024/xtp/src/tests/test_transition_densities.cc:27: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointreader.h:34, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:29, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/orbitals.h:31, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/erdiabatization.h:26, from /build/reproducible-path/votca-2024/xtp/src/tests/test_diabatization.cc:26: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In member function 'void votca::xtp::CptTable::initialize(const votca::xtp::CptLoc&, bool)': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:81:12: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 81 | loc_ = loc; | ^~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:46, from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:25: /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_bse_operator In file included from /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpoint.h:31: /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const std::string&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:178:52: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 178 | attr = loc.createAttribute(name, *strType, dp); | ^ In file included from /usr/include/hdf5/serial/H5Cpp.h:33: /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:180:36: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 180 | attr = loc.openAttribute(name); | ^ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const std::vector >&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:278:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 278 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:280:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 280 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In member function 'void votca::xtp::CheckpointWriter::WriteData(const votca::xtp::CptLoc&, const votca::tools::EigenSystem&, const std::string&) const': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:294:36: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 294 | parent = loc.createGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:296:34: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 296 | parent = loc.openGroup(name); | ^ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_anderson [ 98%] Linking CXX executable unit_test_eigen cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eigen.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eigen.dir/test_eigen.cc.o -o unit_test_eigen -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = long int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:87:18: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_eigen [ 98%] Linking CXX executable unit_test_ppm cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_ppm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o -o unit_test_ppm -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 98%] Linking CXX executable unit_test_gaussian_quadratures cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gaussian_quadratures.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o -o unit_test_gaussian_quadratures -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = double; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = double; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/bse_population.h:50:6: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_gaussian_quadratures make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_ppm /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 98%] Linking CXX executable unit_test_dipoledipoleinteraction cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dipoledipoleinteraction.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o -o unit_test_dipoledipoleinteraction -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_dipoledipoleinteraction /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ [ 98%] Linking CXX executable unit_test_density_filter cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_density_filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o -o unit_test_density_filter -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h: In instantiation of 'votca::xtp::CptTable votca::xtp::CheckpointWriter::openTable(const std::string&, std::size_t, bool) [with T = votca::xtp::QMAtom; std::string = std::__cxx11::basic_string; std::size_t = long unsigned int]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:160:36: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::Group& H5::Group::operator=(const H5::Group&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ /usr/include/hdf5/serial/H5Group.h:62:5: note: because 'H5::Group' has user-provided 'H5::Group::Group(const H5::Group&)' 62 | Group(const Group &original); | ^~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::CompType& H5::CompType::operator=(const H5::CompType&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:41: /usr/include/hdf5/serial/H5CompType.h:39:5: note: because 'H5::CompType' has user-provided 'H5::CompType::CompType(const H5::CompType&)' 39 | CompType(const CompType &original); | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: warning: implicitly-declared 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' is deprecated [-Wdeprecated-copy] 42 | class CptTable { | ^~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:25: /usr/include/hdf5/serial/H5DcreatProp.h:136:5: note: because 'H5::DSetCreatPropList' has user-provided 'H5::DSetCreatPropList::DSetCreatPropList(const H5::DSetCreatPropList&)' 136 | DSetCreatPropList(const DSetCreatPropList &orig); | ^~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5DcreatProp.h:28:17: warning: implicitly-declared 'H5::ObjCreatPropList& H5::ObjCreatPropList::operator=(const H5::ObjCreatPropList&)' is deprecated [-Wdeprecated-copy] 28 | class H5_DLLCPP DSetCreatPropList : public ObjCreatPropList { | ^~~~~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5Cpp.h:24: /usr/include/hdf5/serial/H5OcreatProp.h:52:5: note: because 'H5::ObjCreatPropList' has user-provided 'H5::ObjCreatPropList::ObjCreatPropList(const H5::ObjCreatPropList&)' 52 | ObjCreatPropList(const ObjCreatPropList &original); | ^~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointtable.h:42:7: note: synthesized method 'H5::DSetCreatPropList& H5::DSetCreatPropList::operator=(const H5::DSetCreatPropList&)' first required here 42 | class CptTable { | ^~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:132:13: note: synthesized method 'votca::xtp::CptTable& votca::xtp::CptTable::operator=(votca::xtp::CptTable&&)' first required here 132 | table = CptTable(name, sizeof(typename T::data), loc_); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h: In instantiation of 'void votca::xtp::CheckpointWriter::WriteScalar(const votca::xtp::CptLoc&, const T&, const std::string&) const [with T = int; votca::xtp::CptLoc = H5::Group; std::string = std::__cxx11::basic_string]': /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:74:18: required from 'typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type votca::xtp::CheckpointWriter::operator()(const T&, const std::string&) const [with T = int; typename std::enable_if<(std::is_fundamental<_Tp>::value && (! std::is_same::value))>::type = void; std::string = std::__cxx11::basic_string]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:158:6: required from 'void votca::xtp::AtomContainer::WriteToCpt(votca::xtp::CheckpointWriter&) const [with T = votca::xtp::QMAtom]' /build/reproducible-path/votca-2024/xtp/include/votca/xtp/atomcontainer.h:155:16: required from here /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:162:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 162 | attr = loc.createAttribute(name, *dataType, dp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ /build/reproducible-path/votca-2024/xtp/include/votca/xtp/checkpointwriter.h:164:12: warning: implicitly-declared 'H5::Attribute& H5::Attribute::operator=(const H5::Attribute&)' is deprecated [-Wdeprecated-copy] 164 | attr = loc.openAttribute(name); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/hdf5/serial/H5Attribute.h:31:5: note: because 'H5::Attribute' has user-provided 'H5::Attribute::Attribute(const H5::Attribute&)' 31 | Attribute(const Attribute &original); | ^~~~~~~~~ make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_density_filter [ 98%] Linking CXX executable unit_test_oscillatorstrength_filter [ 98%] Linking CXX executable unit_test_overlap_filter cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_overlap_filter.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_oscillatorstrength_filter.dir/link.txt --verbose=1 [ 98%] Linking CXX executable unit_test_localisation_filter cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_localisation_filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o -o unit_test_oscillatorstrength_filter -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o -o unit_test_overlap_filter -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o -o unit_test_localisation_filter -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 98%] Linking CXX executable unit_test_gaussianwriter cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_gaussianwriter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o -o unit_test_gaussianwriter -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [ 98%] Linking CXX executable unit_test_molden [100%] Linking CXX executable unit_test_orbreorder cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_molden.dir/link.txt --verbose=1 cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orbreorder.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_molden.dir/test_molden.cc.o -o unit_test_molden -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o -o unit_test_orbreorder -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [100%] Built target unit_test_localisation_filter make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_gaussianwriter [100%] Built target unit_test_overlap_filter [100%] Built target unit_test_oscillatorstrength_filter [100%] Linking CXX executable unit_test_DeltaQ_filter cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_DeltaQ_filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o -o unit_test_DeltaQ_filter -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_molden [100%] Built target unit_test_orbreorder make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Linking CXX executable unit_test_populationanalysis [100%] Built target unit_test_DeltaQ_filter cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_populationanalysis.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_populationanalysis.dir/test_populationanalysis.cc.o -o unit_test_populationanalysis -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [100%] Linking CXX executable unit_test_segmentmapper cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_segmentmapper.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_segmentmapper.dir/test_segmentmapper.cc.o -o unit_test_segmentmapper -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_populationanalysis make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_segmentmapper [100%] Linking CXX executable unit_test_eeinteractor cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_eeinteractor.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_eeinteractor.dir/test_eeinteractor.cc.o -o unit_test_eeinteractor -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [100%] Linking CXX executable unit_test_activedensitymatrix cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_activedensitymatrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_activedensitymatrix.dir/test_activedensitymatrix.cc.o -o unit_test_activedensitymatrix -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_eeinteractor [100%] Linking CXX executable unit_test_orca cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_orca.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_orca.dir/test_orca.cc.o -o unit_test_orca -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_activedensitymatrix make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_orca [100%] Linking CXX executable unit_test_transition_densities cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_transition_densities.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_transition_densities.dir/test_transition_densities.cc.o -o unit_test_transition_densities -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [100%] Linking CXX executable unit_test_bsecoupling cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_bsecoupling.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o -o unit_test_bsecoupling -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_transition_densities make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_bsecoupling [100%] Linking CXX executable unit_test_diabatization cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_diabatization.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_diabatization.dir/test_diabatization.cc.o -o unit_test_diabatization -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [100%] Linking CXX executable unit_test_pmlocalization cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_pmlocalization.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_pmlocalization.dir/test_pmlocalization.cc.o -o unit_test_pmlocalization -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_diabatization make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_pmlocalization [100%] Linking CXX executable unit_test_activedftengine cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_activedftengine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_activedftengine.dir/test_activedftengine.cc.o -o unit_test_activedftengine -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so [100%] Linking CXX executable unit_test_dftengine cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_dftengine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o -o unit_test_dftengine -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_activedftengine make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_dftengine [100%] Linking CXX executable unit_test_truncdftengine cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_truncdftengine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_truncdftengine.dir/test_truncdftengine.cc.o -o unit_test_truncdftengine -Wl,-rpath,/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools:/usr/lib/x86_64-linux-gnu/hdf5/serial ../libxtp/libvotca_xtp.so.2024 /usr/lib/x86_64-linux-gnu/libboost_unit_test_framework.so.1.83.0 /usr/lib/x86_64-linux-gnu/libint2.so.2.0.4 /usr/lib/x86_64-linux-gnu/libecpint.a ../../../csg/src/libcsg/libvotca_csg.so.2024 ../../../tools/src/libtools/libvotca_tools.so.2024 /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libfftw3.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_cpp.so /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.so /usr/lib/x86_64-linux-gnu/libcrypto.so /usr/lib/x86_64-linux-gnu/libcurl.so /usr/lib/x86_64-linux-gnu/libpthread.a /usr/lib/x86_64-linux-gnu/libsz.so /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libdl.a -lm /usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_truncdftengine [100%] Linking CXX executable unit_test_davidson cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit_test_davidson.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/votca-2024=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wl,-z,relro -Wl,-z,now CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o -o unit_test_davidson 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/usr/lib/x86_64-linux-gnu/libboost_program_options.so.1.83.0 /usr/lib/x86_64-linux-gnu/libFaddeeva.a /usr/lib/x86_64-linux-gnu/libpugixml.so make[4]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target unit_test_davidson make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' # temporarily use bundled copy of cma to build documentation - not yet packaged separately PYTHONPATH=/build/reproducible-path/votca-2024/debian/cma-3.2.0 \ make -C /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu sphinx make[2]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/votca-2024 -B/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 sphinx make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/votca-2024 -B/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/CMakeFiles 59 make -f CMakeFiles/Makefile2 share/sphinx/CMakeFiles/sphinx.dir/all make[4]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f share/sphinx/CMakeFiles/xtp-tutorials_copy_rst.dir/build.make share/sphinx/CMakeFiles/xtp-tutorials_copy_rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/share/sphinx /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx/CMakeFiles/xtp-tutorials_copy_rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f share/sphinx/CMakeFiles/xtp-tutorials_copy_rst.dir/build.make share/sphinx/CMakeFiles/xtp-tutorials_copy_rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx && /usr/bin/cmake -E copy_directory /build/reproducible-path/votca-2024/share/sphinx/xtp-tutorials /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp-tutorials make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 0%] Built target xtp-tutorials_copy_rst make -f 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/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2024/CMakeModules/gitversion.cmake make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 0%] Built target gitversion make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/libtools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools 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/build/reproducible-path/votca-2024/tools/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools/CMakeFiles/votca_property.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'tools/src/tools/CMakeFiles/votca_property.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 8%] Built target votca_property make -f tools/src/tools/CMakeFiles/tools-tools-rst.dir/build.make tools/src/tools/CMakeFiles/tools-tools-rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools/CMakeFiles/tools-tools-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tools/CMakeFiles/tools-tools-rst.dir/build.make tools/src/tools/CMakeFiles/tools-tools-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 10%] Building votca_property rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools/votca_property --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/tools/votca_property.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 10%] Built target tools-tools-rst make -f csg/src/libcsg/CMakeFiles/votca_csg.dir/build.make csg/src/libcsg/CMakeFiles/votca_csg.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/libcsg /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg/CMakeFiles/votca_csg.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/libcsg/CMakeFiles/votca_csg.dir/build.make csg/src/libcsg/CMakeFiles/votca_csg.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/libcsg/CMakeFiles/votca_csg.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 20%] Built target votca_csg make -f csg/src/tools/CMakeFiles/csg_imc_solve.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_imc_solve.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_imc_solve.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 20%] Built target csg_imc_solve make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_reupdate.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_reupdate.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 20%] Built target csg_reupdate make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_map.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 22%] Built target csg_map make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dump.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 22%] Built target csg_dump make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_property.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 22%] Built target csg_property make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_resample.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 23%] Built target csg_resample make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 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/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_fmatch.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 23%] Built target csg_fmatch make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 25%] Built target csg_gmxtopol make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dlptopol.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 27%] Built target csg_dlptopol make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_density.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 27%] Built target csg_density make -f csg/src/tools/CMakeFiles/csg-tools-rst.dir/build.make csg/src/tools/CMakeFiles/csg-tools-rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg-tools-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg-tools-rst.dir/build.make csg/src/tools/CMakeFiles/csg-tools-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 27%] Building csg_reupdate rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_reupdate.rst [ 27%] Building csg_map rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_map --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_map.rst [ 27%] Building csg_dump rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_dump.rst [ 28%] Building csg_property rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_property --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_property.rst [ 28%] Building csg_resample rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_resample --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_resample.rst [ 28%] Building csg_stat rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_stat --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_stat.rst [ 28%] Building csg_fmatch rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_fmatch.rst [ 28%] Building csg_gmxtopol rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_gmxtopol --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_gmxtopol.rst [ 28%] Building csg_dlptopol rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dlptopol --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_dlptopol.rst [ 28%] Building csg_density rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_density --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_density.rst [ 28%] Building csg_imc_solve rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_imc_solve.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 28%] Built target csg-tools-rst make -f csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann 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Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 32%] Built target csg_boltzmann make -f csg/src/csg_boltzmann/CMakeFiles/csg-boltzmann-rst.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg-boltzmann-rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg-boltzmann-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csg_boltzmann/CMakeFiles/csg-boltzmann-rst.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg-boltzmann-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 32%] Building csg_boltzmann rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/csg_boltzmann --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_boltzmann.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 32%] Built target csg-boltzmann-rst make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/traj_force.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 32%] Built target traj_force make -f csg/src/csgapps/CMakeFiles/fluctuations.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/orientcorr.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 32%] Built target orientcorr make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 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csg/src/csgapps/CMakeFiles/partial_rdf.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/partial_rdf.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 33%] Built target partial_rdf make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/radii.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 33%] Built target radii make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 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/build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/csgapps-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/csgapps-rst.dir/build.make csg/src/csgapps/CMakeFiles/csgapps-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 33%] Building csg_fluctuations rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name fluctuations/csg_fluctuations --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_fluctuations.rst [ 33%] Building csg_orientcorr rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name orientcorr/csg_orientcorr --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_orientcorr.rst [ 33%] Building csg_part_dist rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name part_dist/csg_part_dist --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_part_dist.rst [ 33%] Building csg_partial_rdf rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name partial_rdf/csg_partial_rdf --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_partial_rdf.rst [ 33%] Building csg_radii rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name radii/csg_radii --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_radii.rst [ 33%] Building csg_sphericalorder rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name sphericalorder/csg_sphericalorder --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_sphericalorder.rst [ 33%] Building csg_traj_force rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name traj_force/csg_traj_force --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_traj_force.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 33%] Built target csgapps-rst make -f csg/scripts/CMakeFiles/csg-scripts-rst.dir/build.make csg/scripts/CMakeFiles/csg-scripts-rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts/CMakeFiles/csg-scripts-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg-scripts-rst.dir/build.make csg/scripts/CMakeFiles/csg-scripts-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 33%] Building csg_call rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_call.rst [ 33%] Building csg_inverse rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_inverse --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_inverse.rst [ 33%] Building tag_file.sh rst doc (from tag file) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ tag\ file --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/tag_file.sh.rst [ 33%] Building dummy.sh rst doc (from dummy dummy) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ dummy\ dummy --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/dummy.sh.rst [ 33%] Building functions_common.sh rst doc (from functions common) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ functions\ common --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_common.sh.rst [ 33%] Building inverse.sh rst doc (from csg master) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ csg\ master --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/inverse.sh.rst [ 33%] Building check_csg_xml.py rst doc (from check csg_xml) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ check\ csg_xml --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/check_csg_xml.py.rst [ 33%] Building prepare_generic.sh rst doc (from prepare ibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ prepare\ ibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_generic.sh.rst [ 33%] Building prepare_iie.sh rst doc (from prepare iie) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ prepare\ iie --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_iie.sh.rst [ 33%] Building prepare_imc.sh rst doc (from prepare imc) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ prepare\ imc --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_imc.sh.rst [ 33%] Building prepare_optimizer.sh rst doc (from prepare optimizer) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ prepare\ optimizer --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_optimizer.sh.rst [ 35%] Building prepare_re.sh rst doc (from prepare re) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ prepare\ re --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_re.sh.rst [ 35%] Building prepare_generic_single.sh rst doc (from prepare_single ibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ prepare_single\ ibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_generic_single.sh.rst [ 35%] Building prepare_optimizer_single.sh rst doc (from prepare_single optimizer) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ prepare_single\ optimizer --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/prepare_optimizer_single.sh.rst [ 35%] Building initialize_step_generic.sh rst doc (from initstep ibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ initstep\ ibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_generic.sh.rst [ 35%] Building initialize_step_optimizer.sh rst doc (from initstep optimizer) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ initstep\ optimizer --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_optimizer.sh.rst [ 35%] Building initialize_step_re.sh rst doc (from initstep re) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ initstep\ re --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_re.sh.rst [ 35%] Building add_pot_generic.sh rst doc (from add_pot ibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ add_pot\ ibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/add_pot_generic.sh.rst [ 37%] Building pre_update_re.sh rst doc (from pre_update re) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ pre_update\ re --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/pre_update_re.sh.rst [ 37%] Building post_update_generic.sh rst doc (from post_update ibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ post_update\ ibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_generic.sh.rst [ 37%] Building post_update_generic_single.sh rst doc (from post_update_single ibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ post_update_single\ ibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_generic_single.sh.rst [ 37%] Building post_update_re_single.sh rst doc (from post_update_single re) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ post_update_single\ re --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_update_re_single.sh.rst [ 37%] Building postupd_scale.sh rst doc (from postupd scale) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ scale --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_scale.sh.rst [ 37%] Building postupd_pressure.sh rst doc (from postupd pressure) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ pressure --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_pressure.sh.rst [ 37%] Building postupd_addlj.sh rst doc (from postupd lj) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ lj --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_addlj.sh.rst [ 37%] Building postupd_splinesmooth.sh rst doc (from postupd splinesmooth) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ splinesmooth --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_splinesmooth.sh.rst [ 37%] Building postupd_smooth.sh rst doc (from postupd smooth) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ smooth --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_smooth.sh.rst [ 37%] Building postadd_shift.sh rst doc (from postupd shift) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ shift --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_shift.sh.rst [ 37%] Building postadd_dummy.sh rst doc (from postupd dummy) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ dummy --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_dummy.sh.rst [ 37%] Building postupd_extrapolate.sh rst doc (from postupd extrapolate) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ extrapolate --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_extrapolate.sh.rst [ 37%] Building postupd_kbibi_correction.sh rst doc (from postupd kbibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ kbibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_kbibi_correction.sh.rst [ 38%] Building postupd_cibi_correction.sh rst doc (from postupd cibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ cibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_cibi_correction.sh.rst [ 38%] Building postupd_ibi.sh rst doc (from postupd ibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postupd\ ibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postupd_ibi.sh.rst [ 40%] Building post_add.sh rst doc (from post add) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ post\ add --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_add.sh.rst [ 40%] Building post_add_single.sh rst doc (from post add_single) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ post\ add_single --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/post_add_single.sh.rst [ 40%] Building postadd_copyback.sh rst doc (from postadd copyback) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postadd\ copyback --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_copyback.sh.rst [ 40%] Building postadd_compress.sh rst doc (from postadd compress) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postadd\ compress --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_compress.sh.rst [ 42%] Building postadd_convergence.sh rst doc (from postadd convergence) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postadd\ convergence --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_convergence.sh.rst [ 42%] Building postadd_acc_convergence.sh rst doc (from postadd acc_convergence) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postadd\ acc_convergence --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_acc_convergence.sh.rst [ 42%] Building postadd_overwrite.sh rst doc (from postadd overwrite) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postadd\ overwrite --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_overwrite.sh.rst [ 42%] Building postadd_plot.sh rst doc (from postadd plot) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postadd\ plot --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_plot.sh.rst [ 42%] Building postadd_average.sh rst doc (from postadd average) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postadd\ average --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_average.sh.rst [ 42%] Building postadd_smooth_at_cut_off.sh rst doc (from postadd smooth_at_cut_off) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ postadd\ smooth_at_cut_off --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/postadd_smooth_at_cut_off.sh.rst [ 42%] Building convergence_check_default.sh rst doc (from convergence_check default) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convergence_check\ default --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/convergence_check_default.sh.rst [ 42%] Building resample_target.sh rst doc (from resample target) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ resample\ target --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/resample_target.sh.rst [ 44%] Building update_ibi.sh rst doc (from update ibi) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ ibi --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi.sh.rst [ 44%] Building update_ibi_single.sh rst doc (from update ibi_single) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ ibi_single --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi_single.sh.rst [ 44%] Building update_ibi_pot.pl rst doc (from update ibi_pot) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ ibi_pot --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_ibi_pot.pl.rst [ 44%] Building update_iie.sh rst doc (from update iie) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ iie --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_iie.sh.rst [ 44%] Building iie.py rst doc (from update iie_pot) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ iie_pot --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/iie.py.rst [ 44%] Building calc_rdf_generic.sh rst doc (from rdf_incl_intra generic) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ rdf_incl_intra\ generic --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_rdf_generic.sh.rst [ 44%] Building update_imc.sh rst doc (from update imc) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ imc --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_imc.sh.rst [ 44%] Building update_imc_single.sh rst doc (from update imc_single) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ imc_single --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_imc_single.sh.rst [ 44%] Building optimizer_prepare_state.sh rst doc (from optimizer prepare_state) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ optimizer\ prepare_state --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_prepare_state.sh.rst [ 44%] Building optimizer_parameters_to_potential.sh rst doc (from optimizer parameters_to_potential) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ optimizer\ parameters_to_potential --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_parameters_to_potential.sh.rst [ 44%] Building optimizer_state_to_potentials.sh rst doc (from optimizer state_to_potentials) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ optimizer\ state_to_potentials --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_state_to_potentials.sh.rst [ 44%] Building optimizer_state_to_mapping.sh rst doc (from optimizer state_to_mapping) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ optimizer\ state_to_mapping --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_state_to_mapping.sh.rst [ 44%] Building update_optimizer.sh rst doc (from update optimizer) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ optimizer --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_optimizer.sh.rst [ 44%] Building update_optimizer_single.sh rst doc (from update optimizer_single) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ optimizer_single --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_optimizer_single.sh.rst [ 44%] Building optimizer_target_rdf.sh rst doc (from optimizer_target rdf) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ optimizer_target\ rdf --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_rdf.sh.rst [ 44%] Building optimizer_target_density.sh rst doc (from optimizer_target density) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ optimizer_target\ density --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_density.sh.rst [ 44%] Building optimizer_target_pressure.sh rst doc (from optimizer_target pressure) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ optimizer_target\ pressure --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/optimizer_target_pressure.sh.rst [ 44%] Building simplex_downhill_processor.pl rst doc (from simplex precede_state) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ simplex\ precede_state --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/simplex_downhill_processor.pl.rst [ 44%] Building cma_processor.py rst doc (from cma precede_state) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ cma\ precede_state --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/cma_processor.py.rst [ 45%] Building update_re.sh rst doc (from update re) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ update\ re --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/update_re.sh.rst [ 45%] Building calc_target_rdf_generic.sh rst doc (from calc target_rdf) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ calc\ target_rdf --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_target_rdf_generic.sh.rst [ 45%] Building pressure_cor_simple.pl rst doc (from pressure_cor simple) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ pressure_cor\ simple --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/pressure_cor_simple.pl.rst [ 45%] Building pressure_cor_wjk.pl rst doc (from pressure_cor wjk) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ pressure_cor\ wjk --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/pressure_cor_wjk.pl.rst [ 45%] Building lj_126.pl rst doc (from compute_lj 12_6) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ compute_lj\ 12_6 --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/lj_126.pl.rst [ 45%] Building kbibi_ramp_correction.pl rst doc (from kbibi ramp_correction) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ kbibi\ ramp_correction --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/kbibi_ramp_correction.pl.rst [ 45%] Building calc_kbint.sh rst doc (from calc kbint) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ calc\ kbint --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_kbint.sh.rst [ 45%] Building add_POT.pl rst doc (from table add) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ add --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/add_POT.pl.rst [ 45%] Building table_integrate.pl rst doc (from table integrate) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ integrate --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_integrate.pl.rst [ 45%] Building table_extrapolate.pl rst doc (from table extrapolate) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ extrapolate --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_extrapolate.pl.rst [ 47%] Building merge_tables.pl rst doc (from table merge) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ merge --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/merge_tables.pl.rst [ 47%] Building table_smooth.pl rst doc (from table smooth) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ smooth --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_smooth.pl.rst [ 47%] Building table_smooth_at_cut_off.py rst doc (from table smooth_at_cut_off) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ smooth_at_cut_off --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_smooth_at_cut_off.py.rst [ 47%] Building table_linearop.pl rst doc (from table linearop) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ linearop --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_linearop.pl.rst [ 47%] Building table_dummy.sh rst doc (from table dummy) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ dummy --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_dummy.sh.rst [ 47%] Building table_get_value.pl rst doc (from table get_value) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ get_value --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_get_value.pl.rst [ 47%] Building table_switch_border.pl rst doc (from table switch_border) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ switch_border --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_switch_border.pl.rst [ 47%] Building table_combine.pl rst doc (from table compare) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ compare --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_combine.pl.rst [ 47%] Building table_average.sh rst doc (from table average) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ average --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_average.sh.rst [ 49%] Building table_scale.pl rst doc (from table scale) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ scale --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_scale.pl.rst [ 50%] Building table_change_flag.sh rst doc (from table change_flag) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ change_flag --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_change_flag.sh.rst [ 50%] Building table_functional.sh rst doc (from table functional) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ table\ functional --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_functional.sh.rst [ 52%] Building potential_extrapolate.sh rst doc (from potential extrapolate) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ potential\ extrapolate --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_extrapolate.sh.rst [ 52%] Building potential_shift.pl rst doc (from potential shift) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ potential\ shift --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_shift.pl.rst [ 52%] Building table_to_tab.pl rst doc (from convert_potential tab) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convert_potential\ tab --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_to_tab.pl.rst [ 54%] Building dist_adjust.pl rst doc (from dist adjust) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ dist\ adjust --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/dist_adjust.pl.rst [ 54%] Building dist_boltzmann_invert.pl rst doc (from dist invert) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ dist\ invert --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/dist_boltzmann_invert.pl.rst [ 54%] Building tables_jackknife.pl rst doc (from tables jackknife) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ tables\ jackknife --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/tables_jackknife.pl.rst [ 54%] Building initialize_step_genericsim.sh rst doc (from initstep gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ initstep\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/initialize_step_genericsim.sh.rst [ 54%] Building run_gromacs.sh rst doc (from run gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ run\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/run_gromacs.sh.rst [ 54%] Building clean_generic.sh rst doc (from clean gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ clean\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/clean_generic.sh.rst [ 55%] Building calc_pressure_gromacs.sh rst doc (from pressure gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ pressure\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_pressure_gromacs.sh.rst [ 55%] Building calc_pressure_lammps.sh rst doc (from pressure lammps) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ pressure\ lammps --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_pressure_lammps.sh.rst [ 57%] Building imc_stat_generic.sh rst doc (from imc_stat gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ imc_stat\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/imc_stat_generic.sh.rst [ 57%] Building calc_density_generic.sh rst doc (from density gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ density\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/calc_density_generic.sh.rst [ 57%] Building potential_to_gromacs.sh rst doc (from convert_potential gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convert_potential\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_gromacs.sh.rst [ 57%] Building potentials_to_generic.sh rst doc (from convert_potentials gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convert_potentials\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/potentials_to_generic.sh.rst [ 57%] Building table_to_xvg.pl rst doc (from convert_potential xvg) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convert_potential\ xvg --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/table_to_xvg.pl.rst [ 57%] Building functions_gromacs.sh rst doc (from functions gromacs) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ functions\ gromacs --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_gromacs.sh.rst [ 57%] Building run_genericsim.sh rst doc (from run espresso) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ run\ espresso --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/run_genericsim.sh.rst [ 57%] Building potential_to_generic.sh rst doc (from convert_potential espresso) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convert_potential\ espresso --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_generic.sh.rst [ 57%] Building functions_genericsim.sh rst doc (from functions espresso) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ functions\ espresso --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_genericsim.sh.rst [ 57%] Building potential_to_lammps.sh rst doc (from convert_potential lammps) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convert_potential\ lammps --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_lammps.sh.rst [ 57%] Building functions_dlpoly.sh rst doc (from functions dlpoly) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ functions\ dlpoly --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/functions_dlpoly.sh.rst [ 57%] Building potential_to_dlpoly.sh rst doc (from convert_potential dlpoly) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convert_potential\ dlpoly --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/potential_to_dlpoly.sh.rst [ 57%] Building potentials_to_dlpoly.sh rst doc (from convert_potentials dlpoly) cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/scripts && /usr/bin/cmake -E env VOTCASHARE="/build/reproducible-path/votca-2024/csg/share" PATH="/build/reproducible-path/votca-2024/csg/scripts:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" VOTCA_CSG_DEFAULTS="/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml" /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/csg/scripts/csg_call\ convert_potentials\ dlpoly --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/scripts/potentials_to_dlpoly.sh.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 57%] Built target csg-scripts-rst make -f csg/share/xml/CMakeFiles/csg-xml-rst.dir/build.make csg/share/xml/CMakeFiles/csg-xml-rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/share/xml /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/CMakeFiles/csg-xml-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/share/xml/CMakeFiles/csg-xml-rst.dir/build.make csg/share/xml/CMakeFiles/csg-xml-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 57%] Generating ../../../sphinx/csg/mapping.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/csg/share/xml/mapping.xml -m csg -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/mapping.rst [ 57%] Generating ../../../sphinx/csg/topol.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/csg/share/xml/topol.xml -m csg -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/topol.rst [ 57%] Generating ../../../sphinx/csg/csg_defaults.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/xml/csg_defaults.xml -m csg -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg/csg_defaults.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 57%] Built target csg-xml-rst make -f xtp/scripts/CMakeFiles/xtp-scripts-rst.dir/build.make xtp/scripts/CMakeFiles/xtp-scripts-rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts/CMakeFiles/xtp-scripts-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp-scripts-rst.dir/build.make xtp/scripts/CMakeFiles/xtp-scripts-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 57%] Building xtp_autogen_mapping rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_autogen_mapping --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_autogen_mapping.rst [ 57%] Building xtp_basisset rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_basisset --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_basisset.rst [ 57%] Building xtp_modify_jobfile rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_modify_jobfile --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_modify_jobfile.rst [ 59%] Building xtp_qmmm2qm rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_qmmm2qm --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_qmmm2qm.rst [ 59%] Building xtp_update_mapfile rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/scripts && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name /build/reproducible-path/votca-2024/xtp/scripts/xtp_update_mapfile --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_update_mapfile.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 59%] Built target xtp-scripts-rst make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/libxtp /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp/CMakeFiles/votca_xtp.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Built target votca_xtp make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_parallel.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Built target xtp_parallel make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_map.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 89%] Built target xtp_map make -f xtp/src/tools/CMakeFiles/xtp_run.dir/build.make xtp/src/tools/CMakeFiles/xtp_run.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_run.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_run.dir/build.make xtp/src/tools/CMakeFiles/xtp_run.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_run.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 91%] Built target xtp_run make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[5]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_tools.dir/build'. make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 91%] Built target xtp_tools make -f xtp/src/tools/CMakeFiles/xtp-tools-rst.dir/build.make xtp/src/tools/CMakeFiles/xtp-tools-rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp-tools-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp-tools-rst.dir/build.make xtp/src/tools/CMakeFiles/xtp-tools-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 91%] Building xtp_map rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name xtp_map --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_map.rst [ 91%] Building xtp_parallel rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name xtp_parallel --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_parallel.rst [ 91%] Building xtp_run rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name xtp_run --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_run.rst [ 91%] Building xtp_tools rst doc cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools && /build/reproducible-path/votca-2024/tools/scripts/votca_help2doc --name xtp_tools --format rst --out /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/xtp_tools.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 91%] Built target xtp-tools-rst make -f xtp/share/xtp/xml/CMakeFiles/xtp-xml-rst.dir/build.make xtp/share/xtp/xml/CMakeFiles/xtp-xml-rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/share/xtp/xml /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml/CMakeFiles/xtp-xml-rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/share/xtp/xml/CMakeFiles/xtp-xml-rst.dir/build.make xtp/share/xtp/xml/CMakeFiles/xtp-xml-rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 91%] Generating ../../../../sphinx/xtp/apdft.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/apdft.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/apdft.rst [ 91%] Generating ../../../../sphinx/xtp/coupling.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/coupling.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/coupling.rst [ 93%] Generating ../../../../sphinx/xtp/densityanalysis.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/densityanalysis.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/densityanalysis.rst [ 93%] Generating ../../../../sphinx/xtp/dftgwbse.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/dftgwbse.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/dftgwbse.rst [ 93%] Generating ../../../../sphinx/xtp/diabatization.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/diabatization.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/diabatization.rst [ 93%] Generating ../../../../sphinx/xtp/eanalyze.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/eanalyze.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/eanalyze.rst [ 93%] Generating ../../../../sphinx/xtp/einternal.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/einternal.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/einternal.rst [ 93%] Generating ../../../../sphinx/xtp/eqm.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/eqm.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/eqm.rst [ 93%] Generating ../../../../sphinx/xtp/excitoncoupling.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/excitoncoupling.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/excitoncoupling.rst [ 93%] Generating ../../../../sphinx/xtp/gencube.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/gencube.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/gencube.rst [ 94%] Generating ../../../../sphinx/xtp/gpu_benchmark.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/gpu_benchmark.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/gpu_benchmark.rst [ 94%] Generating ../../../../sphinx/xtp/ianalyze.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/ianalyze.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/ianalyze.rst [ 94%] Generating ../../../../sphinx/xtp/iexcitoncl.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/iexcitoncl.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/iexcitoncl.rst [ 94%] Generating ../../../../sphinx/xtp/iqm.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/iqm.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/iqm.rst [ 94%] Generating ../../../../sphinx/xtp/kmclifetime.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/kmclifetime.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/kmclifetime.rst [ 94%] Generating ../../../../sphinx/xtp/kmcmultiple.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/kmcmultiple.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/kmcmultiple.rst [ 94%] Generating ../../../../sphinx/xtp/log2mps.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/log2mps.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/log2mps.rst [ 94%] Generating ../../../../sphinx/xtp/mapchecker.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/mapchecker.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/mapchecker.rst [ 96%] Generating ../../../../sphinx/xtp/mol2orb.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/mol2orb.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/mol2orb.rst [ 96%] Generating ../../../../sphinx/xtp/molpol.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/molpol.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/molpol.rst [ 96%] Generating ../../../../sphinx/xtp/neighborlist.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/neighborlist.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/neighborlist.rst [ 96%] Generating ../../../../sphinx/xtp/orb2fchk.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/orb2fchk.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/orb2fchk.rst [ 96%] Generating ../../../../sphinx/xtp/orb2mol.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/orb2mol.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/orb2mol.rst [ 96%] Generating ../../../../sphinx/xtp/partialcharges.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/partialcharges.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/partialcharges.rst [ 96%] Generating ../../../../sphinx/xtp/qmmm.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/qmmm.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/qmmm.rst [ 96%] Generating ../../../../sphinx/xtp/spectrum.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/spectrum.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/spectrum.rst [ 98%] Generating ../../../../sphinx/xtp/vaverage.rst cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/xtp/xml && /usr/bin/python3 /build/reproducible-path/votca-2024/tools/scripts/extract_xml_metadata.py -i /build/reproducible-path/votca-2024/xtp/share/xtp/xml/vaverage.xml -o /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/xtp/vaverage.rst make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target xtp-xml-rst make -f share/sphinx/CMakeFiles/tools_copy_rst.dir/build.make share/sphinx/CMakeFiles/tools_copy_rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/share/sphinx /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx/CMakeFiles/tools_copy_rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f share/sphinx/CMakeFiles/tools_copy_rst.dir/build.make 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/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx/CMakeFiles/csg_copy_rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f share/sphinx/CMakeFiles/csg_copy_rst.dir/build.make share/sphinx/CMakeFiles/csg_copy_rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx && /usr/bin/cmake -E copy_directory /build/reproducible-path/votca-2024/share/sphinx/csg /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx/csg make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target csg_copy_rst make -f share/sphinx/CMakeFiles/csg-tutorials_copy_rst.dir/build.make share/sphinx/CMakeFiles/csg-tutorials_copy_rst.dir/depend make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/share/sphinx /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx/CMakeFiles/csg-tutorials_copy_rst.dir/DependInfo.cmake "--color=" make[5]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f share/sphinx/CMakeFiles/csg-tutorials_copy_rst.dir/build.make share/sphinx/CMakeFiles/csg-tutorials_copy_rst.dir/build make[5]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/share/sphinx && /usr/bin/cmake -E copy_directory /build/reproducible-path/votca-2024/share/sphinx/csg-tutorials 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make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/share/man/CMakeFiles/votca_tools_manpages.dir/build.make tools/share/man/CMakeFiles/votca_tools_manpages.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/libtools/CMakeFiles/gitversion.dir/build.make tools/src/libtools/CMakeFiles/gitversion.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/share/man/CMakeFiles/votca_tools_manpages.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/share/man/CMakeFiles/votca_csg_manpages.dir/build.make csg/share/man/CMakeFiles/votca_csg_manpages.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools && /usr/bin/cmake -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -DGIT_EXECUTABLE="" -P /build/reproducible-path/votca-2024/CMakeModules/gitversion.cmake make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_update_mapfile_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build.make csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/share/man/CMakeFiles/votca_csg_manpages.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_modify_jobfile_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_call_build.dir/build.make csg/scripts/CMakeFiles/csg_call_build.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/scripts/CMakeFiles/csg_inverse_build.dir/build.make csg/scripts/CMakeFiles/csg_inverse_build.dir/build make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_basisset_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_inverse_manpage.dir/build'. make -f xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build.make xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_autogen_mapping_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_qmmm2qm_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build.make xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build make -f csg/scripts/CMakeFiles/csg_call_manpage.dir/build.make csg/scripts/CMakeFiles/csg_call_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_call_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build.make xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_inverse_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_basisset_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_update_mapfile_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_autogen_mapping_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/scripts/CMakeFiles/csg_call_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_qmmm2qm_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build.make xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build.make xtp/share/benchmark/CMakeFiles/xtp_benchmark_build.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/scripts/CMakeFiles/xtp_modify_jobfile_build.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 0%] Built target votca_tools_manpages [ 0%] Built target xtp_basisset_manpage [ 0%] Built target xtp_autogen_mapping_manpage [ 0%] Built target xtp_modify_jobfile_manpage [ 0%] Built target csg_inverse_manpage [ 0%] Built target csg_call_build [ 0%] Built target votca_csg_manpages [ 0%] Built target xtp_qmmm2qm_manpage [ 0%] Built target xtp_update_mapfile_build [ 0%] Built target csg_inverse_build [ 0%] Built target xtp_basisset_build [ 0%] Built target csg_call_manpage [ 1%] Built target xtp_autogen_mapping_build [ 1%] Built target xtp_update_mapfile_manpage [ 1%] Built target xtp_qmmm2qm_build [ 1%] Built target xtp_modify_jobfile_build [ 1%] Generating xtp_benchmark.install cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/share/benchmark && /usr/bin/cmake -DINPUT="xtp_benchmark.in2" -DOUTPUT="xtp_benchmark" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/build/reproducible-path/votca-2024" -P /build/reproducible-path/votca-2024/CMakeModules/gitscript.cmake make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 1%] Built target gitversion make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 1%] Built target xtp_benchmark_build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/libtools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/libtools/CMakeFiles/votca_tools.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/libtools/CMakeFiles/votca_tools.dir/build.make tools/src/libtools/CMakeFiles/votca_tools.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/libtools/CMakeFiles/votca_tools.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 7%] Built target votca_tools make -f csg/src/libcsg/CMakeFiles/votca_csg.dir/build.make csg/src/libcsg/CMakeFiles/votca_csg.dir/depend make -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_calculator.dir/build.make tools/src/tests/CMakeFiles/unit_test_calculator.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_constants.dir/build.make tools/src/tests/CMakeFiles/unit_test_constants.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_correlate.dir/build.make tools/src/tests/CMakeFiles/unit_test_correlate.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_calculator.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build.make tools/src/tests/CMakeFiles/unit_test_datacollection.dir/depend cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_constants.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_correlate.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_filesystem.dir/build.make tools/src/tests/CMakeFiles/unit_test_filesystem.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_datacollection.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build.make tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edge_base.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_base.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_elements.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_filesystem.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tools 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphnode.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_base.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_name.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducededge.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu 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tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build.make tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/depend cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_property.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_table.dir/build.make tools/src/tests/CMakeFiles/unit_test_table.dir/depend make -f tools/src/tests/CMakeFiles/unit_test_thread.dir/build.make tools/src/tests/CMakeFiles/unit_test_thread.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducededge.dir/DependInfo.cmake "--color=" make -f tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build.make tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 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Dependencies file "tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/test_crosscorrelate.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_calculator.dir/test_calculator.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_calculator.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linspline.dir/DependInfo.cmake "--color=" Dependencies file "tools/src/tests/CMakeFiles/unit_test_constants.dir/test_constants.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_constants.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "tools/src/tests/CMakeFiles/unit_test_filesystem.dir/test_filesystem.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_filesystem.dir/compiler_depend.internal". make -f tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build.make tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/depend cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/DependInfo.cmake "--color=" Dependencies file "tools/src/tests/CMakeFiles/unit_test_elements.dir/test_elements.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_elements.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_edge_base.dir/test_edge_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edge_base.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/test_cubicspline.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_datacollection.dir/test_datacollection.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_datacollection.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/test_edgecontainer.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/DependInfo.cmake "--color=" Dependencies file "tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/test_floatingpointcomparison.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/test_graphdistvisitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/test_graph_bf_visitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_base.dir/test_graph_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_base.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/test_graphalgorithm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tools/CMakeFiles/votca_property.dir/build.make tools/src/tools/CMakeFiles/votca_property.dir/build Dependencies file "tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/test_graph_df_visitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/test_histogramnew.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphnode.dir/test_graphnode.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphnode.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/test_graphvisitor.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_floatingpointcomparison Consolidate compiler generated dependencies of target unit_test_datacollection Dependencies file "tools/src/tests/CMakeFiles/unit_test_identity.dir/test_identity.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_identity.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_linalg.dir/test_linalg.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linalg.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/test_optionshandler.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build.make tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build Dependencies file "tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/test_objectfactory.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "tools/src/tests/CMakeFiles/unit_test_property.dir/test_property.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_property.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_cubicspline Dependencies file "tools/src/tests/CMakeFiles/unit_test_name.dir/test_name.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_name.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_constants Consolidate compiler generated dependencies of target unit_test_edge_base Consolidate compiler generated dependencies of target unit_test_crosscorrelate Dependencies file "tools/src/tests/CMakeFiles/unit_test_reducededge.dir/test_reducededge.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducededge.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_edgecontainer Dependencies file "tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/test_reducedgraph.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/compiler_depend.internal". Dependencies file "tools/src/tests/CMakeFiles/unit_test_thread.dir/test_thread.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_thread.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_graph_base Dependencies file "tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/test_structureparameters.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_graph_bf_visitor make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_graphdistvisitor Consolidate compiler generated dependencies of target unit_test_elements Consolidate compiler generated dependencies of target unit_test_graphalgorithm make -f tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build.make tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "tools/src/tests/CMakeFiles/unit_test_table.dir/test_table.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_table.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build.make tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build Dependencies file "tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/test_tokenizer.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/compiler_depend.internal". make -f tools/src/tests/CMakeFiles/unit_test_constants.dir/build.make tools/src/tests/CMakeFiles/unit_test_constants.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/test_unitconverter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/compiler_depend.internal". make -f tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build.make tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_floatingpointcomparison.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "tools/src/tests/CMakeFiles/unit_test_random.dir/test_random.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_random.dir/compiler_depend.internal". make -f tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build Dependencies file "tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/test_akimaspline.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/compiler_depend.internal". make -f tools/src/tests/CMakeFiles/unit_test_elements.dir/build.make tools/src/tests/CMakeFiles/unit_test_elements.dir/build Consolidate compiler generated dependencies of target unit_test_graph_df_visitor Consolidate compiler generated dependencies of target unit_test_name make -f tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tools/CMakeFiles/votca_property.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build make -f tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build.make tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build Dependencies file "tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/test_NDimVector.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_graphnode make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build Consolidate compiler generated dependencies of target unit_test_histogramnew make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_objectfactory Dependencies file "tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/test_eigenio_matrixmarket.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_graphvisitor make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_identity Consolidate compiler generated dependencies of target unit_test_linalg make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "tools/src/tests/CMakeFiles/unit_test_linspline.dir/test_linspline.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/CMakeFiles/unit_test_linspline.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_optionshandler make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_unitconverter make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_reducedgraph make -f tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_cubicspline.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build.make tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build make -f tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build.make tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_crosscorrelate.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_identity.dir/build.make tools/src/tests/CMakeFiles/unit_test_identity.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_linalg.dir/build.make tools/src/tests/CMakeFiles/unit_test_linalg.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_name.dir/build.make tools/src/tests/CMakeFiles/unit_test_name.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build.make tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphalgorithm.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build.make tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build make -f tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build.make tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build.make tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_edge_base.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_constants.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_elements.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_datacollection.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_edgecontainer.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_base.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_bf_visitor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graph_df_visitor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphdistvisitor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphvisitor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_name.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_histogramnew.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_unitconverter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_linalg.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_graphnode.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_objectfactory.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_reducedgraph.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_identity.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_optionshandler.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 9%] Built target unit_test_cubicspline [ 10%] Built target unit_test_floatingpointcomparison [ 10%] Built target votca_property [ 10%] Built target unit_test_constants [ 11%] Built target unit_test_graphalgorithm make -f tools/src/tools/CMakeFiles/votca_property_manpage.dir/build.make tools/src/tools/CMakeFiles/votca_property_manpage.dir/depend [ 11%] Built target unit_test_graph_bf_visitor [ 11%] Built target unit_test_graph_base [ 11%] Built target unit_test_graph_df_visitor make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/tools/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools/CMakeFiles/votca_property_manpage.dir/DependInfo.cmake "--color=" [ 11%] Built target unit_test_crosscorrelate [ 11%] Built target unit_test_graphdistvisitor [ 12%] Built target unit_test_histogramnew make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/libcsg /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/libcsg/CMakeFiles/votca_csg.dir/DependInfo.cmake "--color=" [ 12%] Built target unit_test_datacollection [ 12%] Built target unit_test_edge_base [ 14%] Built target unit_test_elements [ 15%] Built target unit_test_edgecontainer [ 15%] Built target unit_test_graphvisitor [ 15%] Built target unit_test_unitconverter [ 16%] Built target unit_test_name [ 18%] Built target unit_test_linalg [ 18%] Built target unit_test_reducedgraph [ 18%] Built target unit_test_identity [ 19%] Built target unit_test_objectfactory [ 19%] Built target unit_test_graphnode make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tools/CMakeFiles/votca_property_manpage.dir/build.make tools/src/tools/CMakeFiles/votca_property_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tools/CMakeFiles/votca_property_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 19%] Built target unit_test_optionshandler [ 19%] Built target votca_property_manpage make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/libcsg/CMakeFiles/votca_csg.dir/build.make csg/src/libcsg/CMakeFiles/votca_csg.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/libcsg/CMakeFiles/votca_csg.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 27%] Built target votca_csg make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/depend make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/depend make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/depend make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/depend make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/depend make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/depend make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/depend make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch.dir/depend make -f csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol.dir/depend make -f csg/src/tools/CMakeFiles/csg_dlptopol.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol.dir/depend make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/depend make -f csg/src/tools/CMakeFiles/csg_imc_solve.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve.dir/depend make -f csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/depend make -f csg/src/csgapps/CMakeFiles/fluctuations.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations.dir/depend make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/depend make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/depend make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_reupdate.dir/DependInfo.cmake "--color=" make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map.dir/DependInfo.cmake "--color=" make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property.dir/DependInfo.cmake "--color=" make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample.dir/DependInfo.cmake "--color=" make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol.dir/DependInfo.cmake "--color=" make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_stat.dir/DependInfo.cmake "--color=" make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/depend cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bead.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/depend cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/DependInfo.cmake "--color=" make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_basebead.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/fluctuations.dir/DependInfo.cmake "--color=" make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu 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/build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 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Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf.dir/DependInfo.cmake "--color=" Consolidate compiler generated dependencies of target unit_test_correlate Consolidate compiler generated dependencies of target unit_test_thread Consolidate compiler generated dependencies of target unit_test_eigenio_matrixmarket Consolidate compiler generated dependencies of target unit_test_linspline Consolidate compiler generated dependencies of target unit_test_akimaspline Consolidate compiler generated dependencies of target unit_test_tokenizer make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_filesystem make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_NDimVector Consolidate compiler generated dependencies of target unit_test_calculator Consolidate compiler generated dependencies of target unit_test_reducededge Consolidate compiler generated dependencies of target unit_test_structureparameters Consolidate compiler generated dependencies of target unit_test_property Consolidate compiler generated dependencies of target unit_test_random Consolidate compiler generated dependencies of target unit_test_table make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_thread.dir/build.make tools/src/tests/CMakeFiles/unit_test_thread.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/test_beadmotif_base.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "csg/src/tests/CMakeFiles/unit_test_bead.dir/test_bead.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bead.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/test_beadtriple.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/compiler_depend.internal". 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build.make tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_reupdate.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate.dir/build make -f csg/src/tools/CMakeFiles/csg_map.dir/build.make csg/src/tools/CMakeFiles/csg_map.dir/build make -f csg/src/tools/CMakeFiles/csg_dump.dir/build.make csg/src/tools/CMakeFiles/csg_dump.dir/build make -f csg/src/tools/CMakeFiles/csg_property.dir/build.make csg/src/tools/CMakeFiles/csg_property.dir/build make -f csg/src/tools/CMakeFiles/csg_resample.dir/build.make csg/src/tools/CMakeFiles/csg_resample.dir/build make -f csg/src/tools/CMakeFiles/csg_stat.dir/build.make csg/src/tools/CMakeFiles/csg_stat.dir/build make -f csg/src/tools/CMakeFiles/csg_fmatch.dir/build.make 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dependencies of target unit_test_beadtriple make -f csg/src/tools/CMakeFiles/csg_density.dir/build.make csg/src/tools/CMakeFiles/csg_density.dir/build make -f csg/src/tools/CMakeFiles/csg_imc_solve.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve.dir/build make -f csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/fluctuations.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations.dir/build make -f csg/src/csgapps/CMakeFiles/orientcorr.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr.dir/build make -f csg/src/csgapps/CMakeFiles/part_dist.dir/build.make csg/src/csgapps/CMakeFiles/part_dist.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_correlate.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_calculator.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/partial_rdf.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_table.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/radii.dir/build.make csg/src/csgapps/CMakeFiles/radii.dir/build make -f csg/src/csgapps/CMakeFiles/sphericalorder.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder.dir/build make -f csg/src/csgapps/CMakeFiles/traj_force.dir/build.make csg/src/csgapps/CMakeFiles/traj_force.dir/build make -f csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_structureparameters.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_reducededge.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_random.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_property.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_tokenizer.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_akimaspline.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_NDimVector.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_linspline.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_bead make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'tools/src/tests/CMakeFiles/unit_test_eigenio_matrixmarket.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_reupdate.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_property.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dump.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_map.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_bead.dir/build.make csg/src/tests/CMakeFiles/unit_test_bead.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_resample.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dlptopol.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_beadstructure_base make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_beadmotif_base make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_fmatch.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_beadmotif_algorithms Consolidate compiler generated dependencies of target unit_test_basebead make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_gmxtopol.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/fluctuations.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_imc_solve.dir/build'. make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_density.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_stat.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_beadmotif_connector make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/part_dist.dir/build'. make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/orientcorr.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadstructure_algorithms.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_basebead.dir/build.make csg/src/tests/CMakeFiles/unit_test_basebead.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/radii.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadtriple.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/traj_force.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/sphericalorder.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build.make csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/partial_rdf.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 29%] Built target unit_test_correlate [ 29%] Built target unit_test_table [ 29%] Built target unit_test_calculator [ 29%] Built target unit_test_structureparameters [ 29%] Built target unit_test_filesystem [ 29%] Built target unit_test_thread make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_bead.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 29%] Built target unit_test_property [ 29%] Built target unit_test_reducededge [ 29%] Built target unit_test_tokenizer [ 29%] Built target unit_test_akimaspline make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadmotif_base.dir/build'. [ 29%] Built target unit_test_random make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 29%] Built target unit_test_linspline [ 29%] Built target unit_test_eigenio_matrixmarket make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadmotif_algorithms.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 31%] Built target csg_map [ 31%] Built target unit_test_NDimVector make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadstructure_base.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_basebead.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 31%] Built target csg_dump [ 31%] Built target csg_property make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_beadmotif_connector.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/depend make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/depend make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/depend make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/DependInfo.cmake "--color=" make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/depend [ 32%] Built target csg_reupdate [ 32%] Built target csg_stat [ 32%] Built target csg_resample make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_interaction.dir/DependInfo.cmake "--color=" [ 32%] Built target csg_density make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/depend [ 32%] Built target csg_imc_solve make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/DependInfo.cmake "--color=" [ 32%] Built target csg_fmatch make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/DependInfo.cmake "--color=" [ 33%] Built target votca_csg_boltzmann make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/DependInfo.cmake "--color=" [ 35%] Built target part_dist make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 36%] Built target csg_gmxtopol cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/DependInfo.cmake "--color=" [ 36%] Built target orientcorr make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/DependInfo.cmake "--color=" [ 37%] Built target csg_dlptopol [ 37%] Built target fluctuations [ 37%] Built target radii make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/depend [ 37%] Built target partial_rdf cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/DependInfo.cmake "--color=" make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/depend make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/depend make -f 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/share/template /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_threaded.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/share/template /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template 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'/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 37%] Built target unit_test_beadmotif_base cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_map_manpage.dir/DependInfo.cmake "--color=" make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dump_manpage.dir/DependInfo.cmake "--color=" make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/depend make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_property_manpage.dir/DependInfo.cmake "--color=" make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_resample_manpage.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix 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/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/DependInfo.cmake "--color=" make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/depend [ 37%] Built target unit_test_bead make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/DependInfo.cmake "--color=" [ 37%] Built target unit_test_basebead Dependencies file "csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/test_nblist_3body.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/depend cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_density_manpage.dir/DependInfo.cmake "--color=" [ 40%] Built target unit_test_beadstructure_base make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/depend [ 40%] Built target unit_test_beadmotif_algorithms make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/depend make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/depend make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/depend [ 40%] Built target unit_test_beadmotif_connector make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/depend Dependencies file "csg/src/tests/CMakeFiles/unit_test_interaction.dir/test_interaction.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_interaction.dir/compiler_depend.internal". make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 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Dependencies file "csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/test_csg_topology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/DependInfo.cmake "--color=" Dependencies file "csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/test_lammpsdatareader.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/test_lammpsdumpreaderwriter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/DependInfo.cmake "--color=" make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/radii_manpage.dir/DependInfo.cmake "--color=" make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/depend make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/depend make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/depend Dependencies file "csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/test_nblistgrid_3body.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/compiler_depend.internal". Dependencies file "csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/test_pdbreader.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/compiler_depend.internal". Dependencies file "csg/src/tests/CMakeFiles/unit_test_triplelist.dir/test_triplelist.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_triplelist.dir/compiler_depend.internal". cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/DependInfo.cmake "--color=" Dependencies file "csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_serial.dir/compiler_depend.internal". Dependencies file "csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template/CMakeFiles/template_threaded.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_nblist_3body Consolidate compiler generated dependencies of target unit_test_boundarycondition make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_interaction make -f csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build.make csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build make -f csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_pdbreader make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_map_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_map_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_reupdate_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_property_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_property_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_lammpsdatareader make -f csg/src/tests/CMakeFiles/unit_test_interaction.dir/build.make csg/src/tests/CMakeFiles/unit_test_interaction.dir/build Consolidate compiler generated dependencies of target unit_test_csg_topology make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dump_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_map_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_property_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_lammpsdumpreaderwriter make -f csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_stat_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_resample_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build Consolidate compiler generated dependencies of target unit_test_nblistgrid_3body make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_triplelist make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_fmatch_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build.make csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build Dependencies file "csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/test_bondedstatistics.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/compiler_depend.internal". make -f csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build.make csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_gmxtopol_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_dlptopol_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build.make csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build.make csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build.make csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build make -f csg/src/tools/CMakeFiles/csg_density_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_density_manpage.dir/build make -f csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build.make csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_boundarycondition.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/test_tabulatedpotential.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target template_threaded make -f csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build.make csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build.make csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_density_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build.make csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tools/CMakeFiles/csg_imc_solve_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build.make csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target template_serial make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/fluctuations_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/radii_manpage.dir/build.make csg/src/csgapps/CMakeFiles/radii_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/orientcorr_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/share/template/CMakeFiles/template_threaded.dir/build.make csg/share/template/CMakeFiles/template_threaded.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/partial_rdf_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/traj_force_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build.make csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_nblist_3body.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build.make csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/share/template/CMakeFiles/template_serial.dir/build.make csg/share/template/CMakeFiles/template_serial.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/radii_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/sphericalorder_manpage.dir/build'. make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_interaction.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csgapps/CMakeFiles/part_dist_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_lammpsdatareader.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build Consolidate compiler generated dependencies of target unit_test_bondedstatistics make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_lammpsdumpreaderwriter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_dump_manpage make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_triplelist.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_pdbreader.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_reupdate_manpage make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_nblistgrid_3body.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_property_manpage make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_csg_topology.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 40%] Built target csg_map_manpage make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/share/template/CMakeFiles/template_serial.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_tabulatedpotential make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build.make csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/share/template/CMakeFiles/template_threaded.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 41%] Built target csg_stat_manpage make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build.make csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build [ 42%] Built target unit_test_boundarycondition [ 42%] Built target unit_test_nblist_3body [ 42%] Built target csg_resample_manpage [ 42%] Built target csg_density_manpage [ 42%] Built target csg_fmatch_manpage [ 42%] Built target csg_dlptopol_manpage [ 42%] Built target csg_gmxtopol_manpage make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 44%] Built target unit_test_interaction [ 44%] Built target unit_test_lammpsdatareader make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_bondedstatistics.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 44%] Built target csg_imc_solve_manpage [ 44%] Built target fluctuations_manpage [ 44%] Built target unit_test_lammpsdumpreaderwriter [ 45%] Built target radii_manpage [ 45%] Built target unit_test_nblistgrid_3body [ 45%] Built target orientcorr_manpage make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/tests/CMakeFiles/unit_test_tabulatedpotential.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 46%] Built target unit_test_triplelist [ 46%] Built target partial_rdf_manpage [ 46%] Built target template_threaded [ 46%] Built target unit_test_csg_topology [ 46%] Built target template_serial [ 46%] Built target traj_force_manpage [ 46%] Built target unit_test_pdbreader [ 46%] Built target sphericalorder_manpage [ 46%] Built target part_dist_manpage [ 46%] Built target unit_test_bondedstatistics [ 48%] Built target csg_boltzmann make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/DependInfo.cmake "--color=" [ 48%] Built target unit_test_tabulatedpotential make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build.make csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 48%] Built target csg_boltzmann_manpage make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/libxtp /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/libxtp/CMakeFiles/votca_xtp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build.make xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/libxtp/CMakeFiles/votca_xtp.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 71%] Built target votca_xtp make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/depend make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/depend make -f xtp/src/tools/CMakeFiles/xtp_run.dir/build.make xtp/src/tools/CMakeFiles/xtp_run.dir/depend make -f xtp/src/tools/CMakeFiles/xtp_tools.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_adiis.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_adiis.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_atom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_atom.dir/depend cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_atom.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build.make xtp/src/tests/CMakeFiles/unit_test_basisset.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_run.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu 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/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu 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Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eigen.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diis.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eigen.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_eris.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/depend cd 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xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/depend cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_glink.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests 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xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests 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Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/test_aobasis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/test_aomatrix3d.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/test_aomatrix.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_atom.dir/test_atom.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_atom.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/DependInfo.cmake "--color=" Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/test_aotransform.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/test_aopotential.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/test_polarsegment.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/test_qmmolecule.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/DependInfo.cmake "--color=" Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/test_qmatom.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_basisset.dir/test_basisset.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_basisset.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bse.dir/test_bse.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/test_convergenceacc.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/depend make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa.dir/DependInfo.cmake "--color=" Dependencies file "xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/test_dftcoupling.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/test_bseoperator_btda.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/test_bfgs_trm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_parallel.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel.dir/build make -f xtp/src/tools/CMakeFiles/xtp_map.dir/build.make xtp/src/tools/CMakeFiles/xtp_map.dir/build Dependencies file "xtp/src/tests/CMakeFiles/unit_test_diis.dir/test_diis.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diis.dir/compiler_depend.internal". 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Consolidate compiler generated dependencies of target unit_test_aotransform Consolidate compiler generated dependencies of target unit_test_aomatrix3d Consolidate compiler generated dependencies of target unit_test_bse Consolidate compiler generated dependencies of target unit_test_aopotential Consolidate compiler generated dependencies of target unit_test_polarsegment make -f xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build Dependencies file "xtp/src/tests/CMakeFiles/unit_test_ppm.dir/test_ppm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_ppm.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_diis Consolidate compiler generated dependencies of target unit_test_eigen Consolidate compiler generated dependencies of target unit_test_bseoperator_btda Consolidate compiler generated dependencies of target unit_test_qmatom Consolidate compiler generated dependencies of target unit_test_basisset make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_map.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rpa.dir/test_rpa.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_parallel.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_dftcoupling Dependencies file "xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/test_polarsite.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/test_qmstate.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build Consolidate compiler generated dependencies of target 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xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_tools.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_run.dir/build'. make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_atom.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_densityintegration make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_hdf5 make -f xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_adiis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build.make xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build Consolidate compiler generated dependencies of target unit_test_eris Consolidate compiler generated dependencies of target unit_test_staticsite Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/test_rpa_h2p.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_cubefile_writer Consolidate compiler generated dependencies of target unit_test_qmnblist Consolidate compiler generated dependencies of target unit_test_vxc_potential Consolidate compiler generated dependencies of target unit_test_vxc_grid Consolidate compiler generated dependencies of target unit_test_qmpair Consolidate compiler generated dependencies of target unit_test_orbitals make -f xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_glink.dir/build.make xtp/src/tests/CMakeFiles/unit_test_glink.dir/build Consolidate compiler generated dependencies of target unit_test_espfit Consolidate compiler generated dependencies of target unit_test_regular_grid make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_eris.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eris.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmmolecule.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_diis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aomatrix.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aobasis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bse.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_polarsite make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmatom.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build.make xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build.make xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build.make xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_polarsegment.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aotransform.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_qmstate Consolidate compiler generated dependencies of target unit_test_rpa make -f xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_ppm make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aopotential.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aomatrix3d.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_eigen.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bseoperator_btda.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build.make xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bfgs_trm.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_basisset.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_glink.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build Consolidate compiler generated dependencies of target unit_test_radial_euler_maclaurin_rule make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_dftcoupling.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_convergenceacc.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 71%] Built target xtp_parallel [ 71%] Built target xtp_map make -f xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build Consolidate compiler generated dependencies of target unit_test_rpa_h2p make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_cubefile_writer.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vxc_potential.dir/build'. make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_ecpaobasis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_densityintegration.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_hdf5.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vxc_grid.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_polarsite.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_espfit.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmstate.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_eris.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_regular_grid.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmnblist.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_staticsite.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmpair.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_ppm.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rpa.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_orbitals.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 71%] Built target unit_test_adiis [ 72%] Built target unit_test_atom make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_radial_euler_maclaurin_rule.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 74%] Built target xtp_run [ 74%] Built target unit_test_aomatrix3d [ 74%] Built target xtp_tools [ 74%] Built target unit_test_aobasis [ 74%] Built target unit_test_qmmolecule [ 74%] Built target unit_test_dftcoupling [ 74%] Built target unit_test_bse [ 74%] Built target unit_test_aotransform make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/depend [ 74%] Built target unit_test_eigen [ 74%] Built target unit_test_aomatrix [ 74%] Built target unit_test_basisset make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rpa_h2p.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segment.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/depend [ 75%] Built target unit_test_ecpaobasis [ 75%] Built target unit_test_convergenceacc [ 75%] Built target unit_test_bfgs_trm make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/depend [ 75%] Built target unit_test_aopotential make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 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/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_topology.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/depend make[3]: Entering directory 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&& /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/DependInfo.cmake "--color=" [ 79%] Built target unit_test_hdf5 make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests 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cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests 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make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests 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make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/depend [ 81%] Built target unit_test_staticsite [ 83%] Built target unit_test_polarsite [ 83%] Built target unit_test_qmstate [ 83%] Built target unit_test_qmnblist make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests 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"--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/DependInfo.cmake "--color=" [ 84%] Built target unit_test_rpa make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/depend [ 84%] Built target unit_test_rpa_h2p Dependencies file "xtp/src/tests/CMakeFiles/unit_test_segment.dir/test_segment.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_segment.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/test_aoshell.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/compiler_depend.internal". [ 84%] Built target unit_test_vxc_grid Dependencies file "xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/test_statetracker.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/test_sphere_lebedev_rule.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/DependInfo.cmake "--color=" Dependencies file "xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/test_symmetric_matrix.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests 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"/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_topology.dir/test_topology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_topology.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/test_sigma_exact.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/test_sigma_ppm.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/test_sigma_cda.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/DependInfo.cmake "--color=" Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gw.dir/test_gw.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gw.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/test_bse_operator.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/DependInfo.cmake "--color=" Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gnode.dir/test_gnode.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gnode.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/test_trustregion.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_grid.dir/test_grid.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_grid.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/test_threecenter_gwbse.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/compiler_depend.internal". 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Dependencies file "xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/test_jobtopology.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_davidson.dir/test_davidson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_davidson.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_segment Dependencies file "xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/test_bsecoupling.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/test_dipoledipoleinteraction.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/test_dftengine.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_symmetric_matrix Dependencies file "xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/test_DeltaQ_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/depend Dependencies file "xtp/src/tests/CMakeFiles/unit_test_orca.dir/test_orca.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orca.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/test_rate_engine.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/compiler_depend.internal". make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_segment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segment.dir/build Consolidate compiler generated dependencies of target unit_test_aoshell Dependencies file "xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/test_oscillatorstrength_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_statetracker make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_sphere_lebedev_rule Dependencies file "xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/test_localisation_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/test_overlap_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/test_newton_rapson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_vc2index Consolidate compiler generated dependencies of target unit_test_trustregion Dependencies file "xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/test_indexparser.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_bse_operator Consolidate compiler generated dependencies of target unit_test_sigma_cda make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_molden.dir/test_molden.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_molden.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build.make xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build Consolidate compiler generated dependencies of target unit_test_gw make -f xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build.make xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build Consolidate compiler generated dependencies of target unit_test_segmentmapper Consolidate compiler generated dependencies of target unit_test_topology Dependencies file "xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/test_orbreorder.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_eeinteractor make -f xtp/src/tests/CMakeFiles/unit_test_gw.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gw.dir/build Dependencies file "xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/test_density_filter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/compiler_depend.internal". make -f xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build.make xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build.make xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/test_incrementalfockbuilder.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_threecenter_dft Consolidate compiler generated dependencies of target unit_test_jobtopology Consolidate compiler generated dependencies of target unit_test_grid Consolidate compiler generated dependencies of target unit_test_davidson Consolidate compiler generated dependencies of target unit_test_sigma_exact Consolidate compiler generated dependencies of target unit_test_populationanalysis Consolidate compiler generated dependencies of target unit_test_gnode Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/test_gaussianwriter.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_qmfragment make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_hist Consolidate compiler generated dependencies of target unit_test_sigma_ppm Consolidate compiler generated dependencies of target unit_test_DeltaQ_filter make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_segment.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_rate_engine make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_topology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_topology.dir/build Consolidate compiler generated dependencies of target unit_test_oscillatorstrength_filter make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build Consolidate compiler generated dependencies of target unit_test_newton_rapson Consolidate compiler generated dependencies of target unit_test_orca Consolidate compiler generated dependencies of target unit_test_indexparser make -f xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build Consolidate compiler generated dependencies of target unit_test_dftengine Consolidate compiler generated dependencies of target unit_test_dipoledipoleinteraction make -f xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_grid.dir/build.make xtp/src/tests/CMakeFiles/unit_test_grid.dir/build Dependencies file "xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/test_parallelism.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit_test_localisation_filter Consolidate compiler generated dependencies of target unit_test_overlap_filter Consolidate compiler generated dependencies of target unit_test_bsecoupling make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Dependencies file "xtp/src/tests/CMakeFiles/unit_test_anderson.dir/test_anderson.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_anderson.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_symmetric_matrix.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_threecenter_gwbse make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_trustregion.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_molden make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_aoshell.dir/build'. make -f xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build.make xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sphere_lebedev_rule.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_statetracker.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build.make xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build.make xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build Consolidate compiler generated dependencies of target unit_test_incrementalfockbuilder make -f xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build.make xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bse_operator.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_hist.dir/build.make xtp/src/tests/CMakeFiles/unit_test_hist.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gw.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build.make xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build.make xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build.make xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_vc2index.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_orca.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orca.dir/build Consolidate compiler generated dependencies of target unit_test_density_filter make -f xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build.make xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_grid.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_orbreorder make -f xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_anderson make -f xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_topology.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_parallelism make -f xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build.make xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_molden.dir/build.make xtp/src/tests/CMakeFiles/unit_test_molden.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_threecenter_dft.dir/build'. Consolidate compiler generated dependencies of target unit_test_gaussianwriter make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build.make xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build.make xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_davidson.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build.make xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sigma_exact.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sigma_cda.dir/build'. make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gnode.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_threecenter_gwbse.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_sigma_ppm.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_segmentmapper.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_qmfragment.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_eeinteractor.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_hist.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_dipoledipoleinteraction.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_newton_rapson.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_jobtopology.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_localisation_filter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_populationanalysis.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_rate_engine.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_orca.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_indexparser.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_bsecoupling.dir/build'. make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_incrementalfockbuilder.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_oscillatorstrength_filter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_anderson.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_dftengine.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_parallelism.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_density_filter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_DeltaQ_filter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_overlap_filter.dir/build'. make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_molden.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_orbreorder.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gaussianwriter.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 85%] Built target unit_test_aoshell [ 85%] Built target unit_test_statetracker [ 85%] Built target unit_test_segment [ 85%] Built target unit_test_topology [ 85%] Built target unit_test_symmetric_matrix [ 85%] Built target unit_test_sphere_lebedev_rule [ 85%] Built target unit_test_bse_operator [ 87%] Built target unit_test_vc2index [ 87%] Built target unit_test_gw [ 87%] Built target unit_test_trustregion [ 87%] Built target unit_test_threecenter_dft make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/build.make xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/depend [ 87%] Built target unit_test_sigma_exact [ 88%] Built target unit_test_sigma_cda make -f xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/depend make -f xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/depend [ 88%] Built target unit_test_sigma_ppm make -f xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/depend [ 88%] Built target unit_test_segmentmapper make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/DependInfo.cmake "--color=" make -f xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/depend [ 89%] Built target unit_test_grid make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/DependInfo.cmake "--color=" [ 90%] Built target unit_test_gnode make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/build.make xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/depend [ 92%] Built target unit_test_threecenter_gwbse [ 92%] Built target unit_test_davidson [ 92%] Built target unit_test_eeinteractor cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/DependInfo.cmake "--color=" make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/depend [ 92%] Built target unit_test_qmfragment [ 92%] Built target unit_test_orca [ 92%] Built target unit_test_dipoledipoleinteraction [ 92%] Built target unit_test_bsecoupling [ 92%] Built target unit_test_jobtopology make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/DependInfo.cmake "--color=" make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/depend [ 92%] Built target unit_test_dftengine [ 92%] Built target unit_test_populationanalysis make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 93%] Built target unit_test_rate_engine cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/DependInfo.cmake "--color=" [ 93%] Built target unit_test_localisation_filter make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/DependInfo.cmake "--color=" [ 93%] Built target unit_test_DeltaQ_filter [ 93%] Built target unit_test_hist [ 93%] Built target unit_test_oscillatorstrength_filter [ 93%] Built target unit_test_newton_rapson [ 93%] Built target unit_test_molden [ 93%] Built target unit_test_indexparser [ 93%] Built target unit_test_overlap_filter [ 93%] Built target unit_test_density_filter [ 94%] Built target unit_test_incrementalfockbuilder [ 94%] Built target unit_test_orbreorder [ 96%] Built target unit_test_anderson [ 96%] Built target unit_test_gaussianwriter [ 97%] Built target unit_test_parallelism Dependencies file "xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/test_pmlocalization.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/test_activedftengine.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/test_truncdftengine.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/test_diabatization.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/test_gaussian_quadratures.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/test_activedensitymatrix.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/compiler_depend.internal". Dependencies file "xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/test_transition_densities.cc.o.d" is newer than depends file "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/compiler_depend.internal". make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_run_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_parallel_manpage.dir/build'. make -f xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build.make xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_tools_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tools/CMakeFiles/xtp_map_manpage.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_pmlocalization Consolidate compiler generated dependencies of target unit_test_gaussian_quadratures Consolidate compiler generated dependencies of target unit_test_truncdftengine Consolidate compiler generated dependencies of target unit_test_activedftengine make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/build.make xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/build Consolidate compiler generated dependencies of target unit_test_diabatization make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build.make xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build Consolidate compiler generated dependencies of target unit_test_activedensitymatrix make -f xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/build make -f xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/build.make xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/build.make xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Consolidate compiler generated dependencies of target unit_test_transition_densities make -f xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/build.make xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/build make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/build.make xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/build [ 97%] Built target xtp_run_manpage [ 97%] Built target xtp_tools_manpage [ 97%] Built target xtp_parallel_manpage [ 98%] Built target xtp_map_manpage make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_gaussian_quadratures.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f CMakeFiles/manpages.dir/build.make CMakeFiles/manpages.dir/depend make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_pmlocalization.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' cd /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024 /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/CMakeFiles/manpages.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_diabatization.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_truncdftengine.dir/build'. make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_activedftengine.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_activedensitymatrix.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'xtp/src/tests/CMakeFiles/unit_test_transition_densities.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [ 98%] Built target unit_test_gaussian_quadratures [ 98%] Built target unit_test_pmlocalization [ 98%] Built target unit_test_diabatization [ 98%] Built target unit_test_truncdftengine [ 98%] Built target unit_test_activedftengine [100%] Built target unit_test_activedensitymatrix make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make -f CMakeFiles/manpages.dir/build.make CMakeFiles/manpages.dir/build [100%] Built target unit_test_transition_densities make[3]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/manpages.dir/build'. make[3]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' [100%] Built target manpages make[2]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' dh_auto_test cd obj-x86_64-linux-gnu && make -j42 test ARGS\+=--verbose ARGS\+=-j42 make[1]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j42 UpdateCTestConfiguration from :/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 103 Start 103: integration_Run_gmx_grompp 103: Test command: /usr/bin/gmx_d "grompp" 103: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 103: Test timeout computed to be: 1500 test 55 Start 55: integration_Run_gmx_grompp_re 55: Test command: /usr/bin/gmx_d "grompp" 55: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx 55: Test timeout computed to be: 1500 test 123 Start 123: integration_Run_gmx_grompp_ppy 123: Test command: /usr/bin/gmx_d "grompp" 123: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_ppy 123: Test timeout computed to be: 1500 test 126 Start 126: integration_Run_gmx_grompp_mma 126: Test command: /usr/bin/gmx_d "grompp" 126: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_mma 126: Test timeout computed to be: 1500 test 50 Start 50: integration_Run_csg_reupdate 50: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate "--gentable" "true" "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/settings_re.xml" 50: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate 50: Test timeout computed to be: 1500 test 52 Start 52: integration_Run_csg_reupdate2 52: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/settings_re.xml" "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/topol_cg.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame_cg.dump" "--hessian-check" "no" 52: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate2 52: Test timeout computed to be: 1500 test 59 Start 59: integration_Run_csg_fmatch 59: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/topol.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump" "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/settings_fmatch.xml" "--cg" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/mapping.xml" 59: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch 59: Test timeout computed to be: 1500 test 61 Start 61: integration_Run_csg_fmatch_3body 61: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/topol.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump" "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/settings_fmatch_3body.xml" "--cg" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/mapping.xml" 61: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body 61: Test timeout computed to be: 1500 test 65 Start 65: integration_Run_csg_map 65: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_map "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/topol.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump" "--out" "frame.dump" "--no-map" "--force" 65: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_map 65: Test timeout computed to be: 1500 test 67 Start 67: integration_Run_csg_map_gro 67: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_map "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/topol.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump" "--cg" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/mapping.xml" "--out" "conf_cg.gro" "--nframes" "1" 67: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_map_gro 67: Test timeout computed to be: 1500 test 69 Start 69: integration_Run_csg_stat 69: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_stat "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/topol.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump" "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/settings_rdf.xml" "--cg" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/mapping.xml" 69: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat 69: Test timeout computed to be: 1500 test 72 Start 72: integration_Run_csg_stat_angular 72: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_stat "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/topol.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump" "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/settings_angular.xml" "--cg" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/mapping.xml" 72: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_angular 72: Test timeout computed to be: 1500 test 74 Start 74: integration_Run_csg_stat-imc 74: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_stat "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/topol.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump" "--do-imc" "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/settings_imc.xml" "--cg" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/mapping.xml" 74: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc 74: Test timeout computed to be: 1500 test 79 Start 79: integration_Run_csg_imc_solve 79: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve "-i" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/imc/CG-CG.imc" "-g" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/imc/CG-CG.gmc" "-n" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/imc/CG-CG.idx" 79: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve 79: Test timeout computed to be: 1500 test 81 Start 81: integration_Run_csg_imc_solve_reg 81: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve "-r" "1000" "-i" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/group_1.imc" "-g" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/group_1.gmc" "-n" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/group_1.idx" 81: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg 81: Test timeout computed to be: 1500 test 85 Start 85: integration_Run_csg_stat_imc_multi 85: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_stat "--top" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/smaller_system/topol.xml" "--trj" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/smaller_system/traj.gro" "--do-imc" "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/smaller_system/settings_imc.xml" 85: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi 85: Test timeout computed to be: 1500 test 89 Start 89: integration_Run_csg_resample_akima 89: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--in" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_in" "--out" "table_akima" "--type" "akima" "--grid" "0:0.1:3" 89: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 89: Test timeout computed to be: 1500 test 91 Start 91: integration_Run_csg_resample_cubic 91: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--in" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_in" "--out" "table_cubic" "--type" "cubic" "--grid" "0:0.1:3" 91: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 91: Test timeout computed to be: 1500 test 93 Start 93: integration_Run_csg_resample_linear 93: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--in" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_in" "--out" "table_linear" "--type" "linear" "--grid" "0:0.1:3" 93: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 93: Test timeout computed to be: 1500 test 95 Start 95: integration_Run_csg_resample_cubicfit 95: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--in" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_in" "--out" "table_cubicfit" "--type" "cubic" "--grid" "0:1:9" "--fitgrid" "0:2:9" 95: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 95: Test timeout computed to be: 1500 test 97 Start 97: integration_Run_csg_dump 97: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top /build/reproducible-path/votca-2024/csg/src/tools/references/methanol-water//topol_cg.xml > csg_dump.out" 97: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump 97: Test timeout computed to be: 1500 test 99 Start 99: integration_Run_csg_dump_gro 99: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top /build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/conf.gro > csg_dump_gro.out" 99: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump_gro 99: Test timeout computed to be: 1500 test 101 Start 101: integration_Run_csg_dump_data 101: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top /build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols_cg/spce.data > csg_dump_data.out" 101: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump_data 101: Test timeout computed to be: 1500 test 115 Start 115: integration_Run_csg_property 115: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2024/csg/src/tools/references/csg_property/csg_defaults.xml --print . --short --path cg.inverse.gromacs.DESC > csg_property.out" 115: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 115: Test timeout computed to be: 1500 test 117 Start 117: integration_Run_csg_property2 117: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2024/csg/src/tools/references/csg_property/csg_defaults.xml --print . --path cg.inverse.gromacs.DESC > csg_property.out2" 117: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 117: Test timeout computed to be: 1500 test 119 Start 119: integration_Run_csg_property3 119: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2024/csg/src/tools/references/csg_property/test.xml --path A.B.C --print . > csg_property.out3" 119: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 119: Test timeout computed to be: 1500 test 121 Start 121: integration_Run_csg_property4 121: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_property --file /build/reproducible-path/votca-2024/csg/src/tools/references/csg_property/test.xml --path A.B --print C > csg_property.out4" 121: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 121: Test timeout computed to be: 1500 test 1 Start 1: integration_votca_propertyHelp 1: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools/votca_property "--help" 1: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tools 1: Test timeout computed to be: 1500 test 2 Start 2: unit_test_calculator 2: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_calculator 2: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 2: Test timeout computed to be: 1500 test 3 Start 3: unit_test_constants 3: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_constants 3: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 3: Test timeout computed to be: 1500 test 4 Start 4: unit_test_correlate 4: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_correlate 4: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 4: Test timeout computed to be: 1500 test 5 Start 5: unit_test_crosscorrelate 5: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_crosscorrelate 5: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 5: Test timeout computed to be: 1500 test 6 Start 6: unit_test_cubicspline 6: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_cubicspline 6: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 6: Test timeout computed to be: 1500 test 7 Start 7: unit_test_datacollection 7: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_datacollection 7: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 7: Test timeout computed to be: 1500 test 8 Start 8: unit_test_edge_base 8: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_edge_base 8: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 8: Test timeout computed to be: 1500 test 9 Start 9: unit_test_edgecontainer 9: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_edgecontainer 9: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 9: Test timeout computed to be: 1500 test 10 Start 10: unit_test_elements 10: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_elements 10: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 10: Test timeout computed to be: 1500 test 11 Start 11: unit_test_filesystem 11: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_filesystem 11: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 11: Test timeout computed to be: 1500 test 12 Start 12: unit_test_floatingpointcomparison 12: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_floatingpointcomparison 12: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 12: Test timeout computed to be: 1500 test 13 Start 13: unit_test_graphalgorithm 13: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphalgorithm 13: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 13: Test timeout computed to be: 1500 test 14 Start 14: unit_test_graph_base 14: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graph_base 14: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 14: Test timeout computed to be: 1500 test 15 Start 15: unit_test_graph_bf_visitor 15: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graph_bf_visitor 15: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 15: Test timeout computed to be: 1500 103: :-) GROMACS - gmx grompp, 2024.1-Debian_2024.1_1+b1 (double precision) (-: 103: 103: Executable: /usr/bin/gmx_d 103: Data prefix: /usr 103: Working dir: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 103: Command line: 103: gmx_d grompp 103: 103: Ignoring obsolete mdp entry 'title' 103: 103: NOTE 1 [file grompp.mdp]: 103: With Verlet lists the optimal nstlist is >= 10, with GPUs >= 20. Note 103: that with the Verlet scheme, nstlist has no effect on the accuracy of 103: your simulation. 103: 103: 103: NOTE 2 [file grompp.mdp]: 103: You have set rlist larger than the interaction cut-off, but you also have 103: verlet-buffer-tolerance > 0. Will set rlist using 103: verlet-buffer-tolerance. 103: 55: :-) GROMACS - gmx grompp, 2024.1-Debian_2024.1_1+b1 (double precision) (-: 55: 55: Executable: /usr/bin/gmx_d 55: Data prefix: /usr 55: Working dir: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx 55: Command line: 55: gmx_d grompp 55: 55: Ignoring obsolete mdp entry 'title' 55: 55: NOTE 1 [file grompp.mdp]: 55: With Verlet lists the optimal nstlist is >= 10, with GPUs >= 20. Note 55: that with the Verlet scheme, nstlist has no effect on the accuracy of 55: your simulation. 55: 55: 55: NOTE 2 [file grompp.mdp]: 55: You have set rlist larger than the interaction cut-off, but you also have 55: verlet-buffer-tolerance > 0. Will set rlist using 55: verlet-buffer-tolerance. 55: 55: Number of degrees of freedom in T-Coupling group System is 645.00 55: 55: There were 2 NOTEs 55: 55: GROMACS reminds you: "Chemistry: It tends to be a messy science." (Gunnar von Heijne, former chair of the Nobel Committee for chemistry) 55: 55: Setting the LD random seed to -1895829510 55: 55: Generated 1 of the 1 non-bonded parameter combinations 55: 55: Excluding 1 bonded neighbours molecule type 'SOL' 55: Analysing residue names: 55: There are: 216 Water residues 55: 55: Determining Verlet buffer for a tolerance of 0.005 kJ/mol/ps at 300 K 55: 55: Calculated rlist for 1x1 atom pair-list as 0.900 nm, buffer size 0.000 nm 55: 55: Set rlist, assuming 4x4 atom pair-list, to 0.900 nm, buffer size 0.000 nm 55: 55: Note that mdrun will redetermine rlist based on the actual pair-list setup 55: 55: This run will generate roughly 0 Mb of data 123: :-) GROMACS - gmx grompp, 2024.1-Debian_2024.1_1+b1 (double precision) (-: 123: 123: Executable: /usr/bin/gmx_d 123: Data prefix: /usr 123: Working dir: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_ppy 123: Command line: 123: gmx_d grompp 123: 123: 123: NOTE 1 [file grompp.mdp]: 123: With Verlet lists the optimal nstlist is >= 10, with GPUs >= 20. Note 123: that with the Verlet scheme, nstlist has no effect on the accuracy of 123: your simulation. 123: 123: 123: NOTE 2 [file grompp.mdp]: 123: You have set rlist larger than the interaction cut-off, but you also have 123: verlet-buffer-tolerance > 0. Will set rlist using 123: verlet-buffer-tolerance. 123: 123: Generating 1-4 interactions: fudge = 0.5 123: 123: NOTE 3 [file topol.top, line 484]: 123: The bond in molecule-type Protein between atoms 1 N and 2 HN has an 123: estimated oscillational period of 1.0e-02 ps, which is less than 10 times 123: the time step of 2.0e-03 ps. 123: Maybe you forgot to change the constraints mdp option. 123: 123: Number of degrees of freedom in T-Coupling group System is 243.00 123: 123: There were 3 NOTEs 123: 123: GROMACS reminds you: "Chemistry: It tends to be a messy science." (Gunnar von Heijne, former chair of the Nobel Committee for chemistry) 123: 123: Setting the LD random seed to -805383057 123: 123: Generated 28 of the 28 non-bonded parameter combinations 123: 123: Generated 28 of the 28 1-4 parameter combinations 123: 123: Excluding 3 bonded neighbours molecule type 'Protein' 123: Analysing residue names: 123: There are: 10 Other residues 123: Analysing residues not classified as Protein/DNA/RNA/Water and splitting into groups... 123: 123: Determining Verlet buffer for a tolerance of 0.005 kJ/mol/ps at 300 K 123: 123: Calculated rlist for 1x1 atom pair-list as 0.900 nm, buffer size 0.000 nm 123: 123: Set rlist, assuming 4x4 atom pair-list, to 0.900 nm, buffer size 0.000 nm 123: 123: Note that mdrun will redetermine rlist based on the actual pair-list setup 123: 123: This run will generate roughly 0 Mb of data 126: :-) GROMACS - gmx grompp, 2024.1-Debian_2024.1_1+b1 (double precision) (-: 126: 126: Executable: /usr/bin/gmx_d 126: Data prefix: /usr 126: Working dir: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_mma 126: Command line: 126: gmx_d grompp 126: 126: Ignoring obsolete mdp entry 'andersen_seed' 126: Ignoring obsolete mdp entry 'optimize_fft' 126: Replacing old mdp entry 'nstxtcout' by 'nstxout-compressed' 126: Replacing old mdp entry 'xtc-precision' by 'compressed-x-precision' 126: Generating 1-4 interactions: fudge = 0.5 126: 126: NOTE 1 [file topol.top, line 522]: 126: The bond in molecule-type 3-MMA between atoms 17 C2 and 18 H4 has an 126: estimated oscillational period of 1.2e-02 ps, which is less than 10 times 126: the time step of 2.0e-03 ps. 126: Maybe you forgot to change the constraints mdp option. 126: 126: Number of degrees of freedom in T-Coupling group System is 156.00 126: 126: NOTE 2 [file grompp.mdp]: 126: You are using a plain Coulomb cut-off, which might produce artifacts. 126: You might want to consider using PME electrostatics. 126: 126: 126: 126: NOTE 3 [file grompp.mdp]: 126: This run will generate roughly 3755 Mb of data 126: 126: 126: NOTE 4 [file grompp.mdp]: 126: COM removal frequency is set to (705032704). 126: Other settings require a global communication frequency of 100. 126: Note that this will require additional global communication steps, 126: which will reduce performance when using multiple ranks. 126: Consider setting nstcomm to a multiple of 100. 126: 126: 126: There were 4 NOTEs 126: 126: GROMACS reminds you: "Chemistry: It tends to be a messy science." (Gunnar von Heijne, former chair of the Nobel Committee for chemistry) 126: 126: Setting the LD random seed to 485972314 126: 126: Generated 21 of the 21 non-bonded parameter combinations 126: 126: Generated 21 of the 21 1-4 parameter combinations 126: 126: Excluding 3 bonded neighbours molecule type '3-MMA' 126: 126: Setting gen_seed to -604766343 126: 126: Velocities were taken from a Maxwell distribution at 600 K 126: Analysing residue names: 126: There are: 3 Other residues 126: Analysing residues not classified as Protein/DNA/RNA/Water and splitting into groups... 126: 126: Determining Verlet buffer for a tolerance of 0.005 kJ/mol/ps at 600 K 126: 126: Calculated rlist for 1x1 atom pair-list as 1.052 nm, buffer size 0.152 nm 126: 126: Set rlist, assuming 4x4 atom pair-list, to 1.016 nm, buffer size 0.116 nm 126: 126: Note that mdrun will redetermine rlist based on the actual pair-list setup 50: Writing CG parameters and potential(s) 50: Writing file: CG-CG.pot.new 50: CG-CG potential's extrapolated core is attractive! 50: Artifically enforcing repulsive core. 50: 52: I have 216 beads in 216 molecules 52: Reading frame, timestep 0 52: We have CG-CG CG potential 52: Between beads CG-CG 52: With Function form cbspl 52: And 4 parameters to optimize 52: Potential range: 52: rmin = 0.26 [nm] 52: rcutoff = 0.3 [nm] 52: Total number of parameters to optimize: 4 52: Updating parameters 52: ****************** WARNING ***************** 52: Hessian H NOT a positive definite! 52: This can be a result of poor initial guess or ill-suited CG potential settings or poor CG sampling. 52: ******************************************** 52: 52: However, you want to proceed despite non-positive definite H. 52: Non-positive H does not gurantee relative entropy iterations to converge to minimum. 52: You can turn on Hessian check by setting command line option --hessian-check=true. 52: In this case, alternative update option is steepest descent. 52: AA Ensemble Avg Energy :: 0.328298 52: CG Ensemble Avg Energy :: 5.32913 52: Writing CG parameters and potential(s) 52: Writing file: CG-CG.pot.new 52: CG-CG potential's extrapolated core is attractive! 52: Artifically enforcing repulsive core. 52: 52: Writing file: CG-CG.param.new 52: CG-CG potential's extrapolated core is attractive! 52: Artifically enforcing repulsive core. 52: 52: Finished RE update! 59: I have 648 beads in 216 molecules 59: I have 216 beads in 216 molecules for the coarsegraining 59: Reading frame, timestep 0 59: a: 0.37 ,sigma: 1 ,gamma: 0.12 59: Number of spline functions for the interaction CG-CG:13 59: 59: You are using VOTCA! 59: 59: hey, somebody wants to forcematch! 59: 59: Using constrained Least Squares! 59: 59: This should be a number: -19.5494 59: 59: Block No1 done! 59: Updating file: CG-CG.force 59: 59: We are done, thank you very much! 61: I have 648 beads in 216 molecules 61: I have 216 beads in 216 molecules for the coarsegraining 61: Reading frame, timestep 0 61: a: 0.37 ,sigma: 1 ,gamma: 0.12 61: Number of spline functions for the interaction CG-CG:48 61: a: 0.37 ,sigma: 1 ,gamma: 0.08 61: Number of spline functions for the interaction CG-CG-CG:36 61: 61: You are using VOTCA! 61: 61: hey, somebody wants to forcematch! 61: 61: Using constrained Least Squares! 61: 65: I have 648 beads in 216 molecules 65: Reading frame, timestep 0 65: writing coarse-grained trajectory to frame.dump 67: I have 648 beads in 216 molecules 67: I have 216 beads in 216 molecules for the coarsegraining 67: Reading frame, timestep 0 67: writing coarse-grained trajectory to conf_cg.gro 69: begin to calculate distribution functions 69: # of bonded interactions: 0 69: # of non-bonded interactions: 1 69: I have 648 beads in 216 molecules 69: I have 216 beads in 216 molecules for the coarsegraining 69: Reading frame, timestep 0 69: 69: written CG-CG.dist.new 69: written CG-CG.force.new 72: begin to calculate distribution functions 72: # of bonded interactions: 0 72: # of non-bonded interactions: 1 72: I have 648 beads in 216 molecules 72: I have 216 beads in 216 molecules for the coarsegraining 72: Reading frame, timestep 0 72: 72: written CG-CG-CG.dist.new 74: begin to calculate inverse monte carlo parameters 74: # of bonded interactions: 0 74: # of non-bonded interactions: 1 74: I have 648 beads in 216 molecules 74: I have 216 beads in 216 molecules for the coarsegraining 74: Reading frame, timestep 0 74: 74: written CG-CG.dist.new 74: written CG-CG.imc 74: written CG-CG.gmc 74: written CG-CG.idx 85: begin to calculate inverse monte carlo parameters 85: # of bonded interactions: 0 85: # of non-bonded interactions: 3 85: I have 200 beads in 200 molecules 85: 85: written LJ1-LJ1.dist.new 85: written LJ1-LJ2.dist.new 85: written LJ2-LJ2.dist.new 85: written all.imc 85: written all.gmc 85: written all.idx 95: doing cubic fit 0:2:9 1: ================================================== 1: ======== VOTCA (http://www.votca.org) ======== 1: ================================================== 1: 1: please submit bugs to https://github.com/votca/votca/issues 1: 1: votca_property 1: votca_tools, version 2024 (compiled Feb 29 2024, 03:52:32) 1: 1: Helper for parsing XML files 1: 1: 1: Allowed options: 1: -h [ --help ] display this help and exit 1: --verbose be loud and noisy 1: --verbose1 be very loud and noisy 1: -v [ --verbose2 ] be extremly loud and noisy 1: --file arg xml file to parse 1: --format arg output format [XML TXT] 1: --level arg output from this level 1: 2: Running 1 test case... 2: 2: *** No errors detected 2:  3: Running 1 test case... 3: 3: *** No errors detected 3:  4: Running 1 test case... 4: 4: *** No errors detected 4:  5: Running 1 test case... 5: 5: *** No errors detected 5:  6: Running 5 test cases... 6: 6: *** No errors detected 6:  7: Running 6 test cases... 7: 7: *** No errors detected 7:  8: Running 8 test cases... 8: Vertices 8: 2 3 8: 8: 8: *** No errors detected 8:  9: Running 10 test cases... 9: 9: *** No errors detected 9:  10: Running 2 test cases... 10: 10: *** No errors detected 10:  11: Running 3 test cases... 11: 11: *** No errors detected 11:  12: Running 1 test case... 12: 12: *** No errors detected 12:  13: Running 5 test cases... 13: is single network 1 13: EDGE CHECK ************************************** 13: 13: *** No errors detected 1/249 Test #55: integration_Run_gmx_grompp_re ...................... Passed 0.09 sec 2/249 Test #123: integration_Run_gmx_grompp_ppy ..................... Passed 0.09 sec 3/249 Test #126: integration_Run_gmx_grompp_mma ..................... Passed 0.09 sec 4/249 Test #50: integration_Run_csg_reupdate ....................... Passed 0.09 sec 5/249 Test #52: integration_Run_csg_reupdate2 ...................... Passed 0.08 sec 6/249 Test #59: integration_Run_csg_fmatch ......................... Passed 0.08 sec 7/249 Test #65: integration_Run_csg_map ............................ Passed 0.08 sec 8/249 Test #67: integration_Run_csg_map_gro ........................ Passed 0.08 sec 9/249 Test #69: integration_Run_csg_stat ........................... Passed 0.08 sec 10/249 Test #74: integration_Run_csg_stat-imc ....................... Passed 0.08 sec 11/249 Test #79: integration_Run_csg_imc_solve ...................... Passed 0.07 sec 12/249 Test #85: integration_Run_csg_stat_imc_multi ................. Passed 0.07 sec 13/249 Test #89: integration_Run_csg_resample_akima ................. Passed 0.07 sec 14/249 Test #91: integration_Run_csg_resample_cubic ................. Passed 0.07 sec 15/249 Test #93: integration_Run_csg_resample_linear ................ Passed 0.07 sec 16/249 Test #95: integration_Run_csg_resample_cubicfit .............. Passed 0.07 sec 17/249 Test #97: integration_Run_csg_dump ........................... Passed 0.06 sec 18/249 Test #99: integration_Run_csg_dump_gro ....................... Passed 0.06 sec 19/249 Test #101: integration_Run_csg_dump_data ...................... Passed 0.06 sec 20/249 Test #115: integration_Run_csg_property ....................... Passed 0.06 sec 21/249 Test #117: integration_Run_csg_property2 ...................... Passed 0.06 sec 22/249 Test #119: integration_Run_csg_property3 ...................... Passed 0.05 sec 23/249 Test #121: integration_Run_csg_property4 ...................... Passed 0.05 sec 24/249 Test #1: integration_votca_propertyHelp ..................... Passed 0.05 sec 25/249 Test #2: unit_test_calculator ............................... Passed 0.05 sec 26/249 Test #3: unit_test_constants ................................ Passed 0.05 sec 27/249 Test #4: unit_test_correlate ................................ Passed 0.05 sec 28/249 Test #5: unit_test_crosscorrelate ........................... Passed 0.04 sec 29/249 Test #6: unit_test_cubicspline .............................. Passed 0.04 sec 30/249 Test #7: unit_test_datacollection ........................... Passed 0.04 sec 31/249 Test #8: unit_test_edge_base ................................ Passed 0.04 sec 32/249 Test #9: unit_test_edgecontainer ............................ Passed 0.03 sec 33/249 Test #10: unit_test_elements ................................. Passed 0.03 sec 34/249 Test #11: unit_test_filesystem ............................... Passed 0.03 sec 35/249 Test #12: unit_test_floatingpointcomparison .................. Passed 0.02 sec test 56 Start 56: integration_Run_csg_reupdate_gmx 56: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate "--options" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/settings_re.xml" "--top" "topol.tpr" "--trj" "conf.gro" "--hessian-check" "no" 56: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx 56: Test timeout computed to be: 1500 test 124 Start 124: integration_Run_csg_boltzmann_ppy 124: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/csg_boltzmann "--top" "topol.tpr" "--cg" "ppy10.xml" "--excl" "excl.txt" 124: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_ppy 124: Test timeout computed to be: 1500 test 127 Start 127: integration_Run_csg_boltzmann_mma 127: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csg_boltzmann/csg_boltzmann "--top" "topol.tpr" "--cg" "mapping.xml" "--excl" "excl.txt" 127: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_mma 127: Test timeout computed to be: 1500 test 16 Start 16: unit_test_graph_df_visitor 16: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graph_df_visitor 16: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 16: Test timeout computed to be: 1500 test 17 Start 17: unit_test_graphdistvisitor 17: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphdistvisitor 17: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 17: Test timeout computed to be: 1500 test 18 Start 18: unit_test_graphnode 18: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphnode 18: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 18: Test timeout computed to be: 1500 test 19 Start 19: unit_test_graphvisitor 19: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_graphvisitor 19: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 19: Test timeout computed to be: 1500 test 20 Start 20: unit_test_histogramnew 20: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_histogramnew 20: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 20: Test timeout computed to be: 1500 test 21 Start 21: unit_test_identity 21: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_identity 21: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 21: Test timeout computed to be: 1500 test 22 Start 22: unit_test_linalg 22: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_linalg 22: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 22: Test timeout computed to be: 1500 test 23 Start 23: unit_test_name 23: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_name 23: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 23: Test timeout computed to be: 1500 test 24 Start 24: unit_test_objectfactory 24: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_objectfactory 24: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 24: Test timeout computed to be: 1500 test 25 Start 25: unit_test_optionshandler 25: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_optionshandler 25: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 25: Test timeout computed to be: 1500 test 26 Start 26: unit_test_property 26: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_property 26: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 26: Test timeout computed to be: 1500 test 27 Start 27: unit_test_reducededge 27: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_reducededge 27: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 27: Test timeout computed to be: 1500 test 28 Start 28: unit_test_reducedgraph 28: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_reducedgraph 28: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 28: Test timeout computed to be: 1500 test 29 Start 29: unit_test_structureparameters 29: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_structureparameters 29: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 29: Test timeout computed to be: 1500 test 30 Start 30: unit_test_table 30: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_table 30: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 30: Test timeout computed to be: 1500 test 31 Start 31: unit_test_thread 31: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_thread 31: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 31: Test timeout computed to be: 1500 test 32 Start 32: unit_test_tokenizer 32: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_tokenizer 32: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 32: Test timeout computed to be: 1500 test 33 Start 33: unit_test_random 33: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_random 33: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 33: Test timeout computed to be: 1500 test 34 Start 34: unit_test_akimaspline 34: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_akimaspline 34: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 34: Test timeout computed to be: 1500 test 35 Start 35: unit_test_linspline 35: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_linspline 35: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 35: Test timeout computed to be: 1500 test 36 Start 36: unit_test_unitconverter 36: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_unitconverter 36: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 36: Test timeout computed to be: 1500 test 37 Start 37: unit_test_NDimVector 37: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_NDimVector 37: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 37: Test timeout computed to be: 1500 test 38 Start 38: unit_test_eigenio_matrixmarket 38: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests/unit_test_eigenio_matrixmarket 38: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/tools/src/tests 38: Test timeout computed to be: 1500 test 39 Start 39: integration_csg_reupdateHelp 39: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_reupdate "--help" 39: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 39: Test timeout computed to be: 1500 test 40 Start 40: integration_csg_mapHelp 40: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_map "--help" 40: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 40: Test timeout computed to be: 1500 test 41 Start 41: integration_csg_dumpHelp 41: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump "--help" 41: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 41: Test timeout computed to be: 1500 test 42 Start 42: integration_csg_propertyHelp 42: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_property "--help" 42: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 42: Test timeout computed to be: 1500 test 43 Start 43: integration_csg_resampleHelp 43: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_resample "--help" 43: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 43: Test timeout computed to be: 1500 test 44 Start 44: integration_csg_statHelp 44: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_stat "--help" 44: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 44: Test timeout computed to be: 1500 test 45 Start 45: integration_csg_fmatchHelp 45: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_fmatch "--help" 45: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 45: Test timeout computed to be: 1500 test 46 Start 46: integration_csg_gmxtopolHelp 46: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_gmxtopol "--help" 46: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 46: Test timeout computed to be: 1500 test 47 Start 47: integration_csg_dlptopolHelp 47: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dlptopol "--help" 47: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 47: Test timeout computed to be: 1500 103: Generating 1-4 interactions: fudge = 0.5 36/249 Test #72: integration_Run_csg_stat_angular ................... Passed 0.14 sec 13:  37/249 Test #13: unit_test_graphalgorithm ........................... Passed 0.08 sec 14: Running 8 test cases... 14: 14: *** No errors detected 14:  38/249 Test #14: unit_test_graph_base ............................... Passed 0.08 sec 15: Running 3 test cases... 15: 15: *** No errors detected 15:  39/249 Test #15: unit_test_graph_bf_visitor ......................... Passed 0.07 sec 56: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 56: I have 216 beads in 216 molecules 56: We have CG-CG CG potential 56: Between beads CG-CG 56: With Function form cbspl 56: And 4 parameters to optimize 56: Potential range: 56: rmin = 0.26 [nm] 56: rcutoff = 0.3 [nm] 56: Total number of parameters to optimize: 4 56: Updating parameters 56: ****************** WARNING ***************** 56: Hessian H NOT a positive definite! 56: This can be a result of poor initial guess or ill-suited CG potential settings or poor CG sampling. 56: ******************************************** 56: 56: However, you want to proceed despite non-positive definite H. 56: Non-positive H does not gurantee relative entropy iterations to converge to minimum. 56: You can turn on Hessian check by setting command line option --hessian-check=true. 56: In this case, alternative update option is steepest descent. 56: AA Ensemble Avg Energy :: 0.328298 56: CG Ensemble Avg Energy :: 5.31427 56: Writing CG parameters and potential(s) 56: Writing file: CG-CG.pot.new 56: CG-CG potential's extrapolated core is attractive! 56: Artifically enforcing repulsive core. 56: 56: Writing file: CG-CG.param.new 56: CG-CG potential's extrapolated core is attractive! 56: Artifically enforcing repulsive core. 56: 56: Finished RE update! 124: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 124: I have 82 beads in 1 molecules 124: I have 10 beads in 1 molecules for the coarsegraining 124: Writing exclusion list for atomistic molecule Protein in coarse grained representation Protein 127: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 127: I have 53 beads in 1 molecules 127: I have 11 beads in 1 molecules for the coarsegraining 127: Writing exclusion list for atomistic molecule 3-MMA in coarse grained representation 3-MMA 16: Running 3 test cases... 16: 16: *** No errors detected 16:  17: Running 3 test cases... 17: 17: *** No errors detected 17:  18: Running 4 test cases... 18: 18: *** No errors detected 18:  19: Running 2 test cases... 19: 19: *** No errors detected 19:  20: Running 6 test cases... 20: 20: *** No errors detected 20:  21: Running 2 test cases... 21: 21: *** No errors detected 21:  22: Running 1 test case... 22: 22: *** No errors detected 22:  23: Running 2 test cases... 23: 23: *** No errors detected 23:  24: Running 1 test case... 24: 24: *** No errors detected 24:  25: Running 6 test cases... 25: 25: *** No errors detected 25:  26: Running 8 test cases... 26: 26: *** No errors detected 26:  27: Running 10 test cases... 27: Vertices 27: 2 3 27: 27: 27: *** No errors detected 27:  28: Running 9 test cases... 28: 4 28: 3 28: 2 28: 0 28: 28: *** No errors detected 28:  29: Running 3 test cases... 29: 29: *** No errors detected 29:  30: Running 10 test cases... 30: 30: *** No errors detected 30:  31: Running 3 test cases... 31: 31: *** No errors detected 31:  32: Running 5 test cases... 32: 32: *** No errors detected 32:  33: Running 2 test cases... 33: 33: *** No errors detected 33:  34: Running 1 test case... 34: 34: *** No errors detected 34:  35: Running 2 test cases... 35: 35: *** No errors detected 35:  36: Running 9 test cases... 36: 36: *** No errors detected 36:  37: Running 1 test case... 37: 37: *** No errors detected 37:  38: Running 4 test cases... 38: /build/reproducible-path/votca-2024/tools/src/tests/DataFiles 38: 38: *** No errors detected 38:  40/249 Test #81: integration_Run_csg_imc_solve_reg .................. Passed 0.14 sec 41/249 Test #56: integration_Run_csg_reupdate_gmx ................... Passed 0.06 sec 42/249 Test #124: integration_Run_csg_boltzmann_ppy .................. Passed 0.06 sec 43/249 Test #127: integration_Run_csg_boltzmann_mma .................. Passed 0.06 sec 44/249 Test #16: unit_test_graph_df_visitor ......................... Passed 0.06 sec 45/249 Test #17: unit_test_graphdistvisitor ......................... Passed 0.06 sec 46/249 Test #18: unit_test_graphnode ................................ Passed 0.05 sec 47/249 Test #19: unit_test_graphvisitor ............................. Passed 0.05 sec 48/249 Test #20: unit_test_histogramnew ............................. Passed 0.05 sec 49/249 Test #21: unit_test_identity ................................. Passed 0.05 sec 50/249 Test #22: unit_test_linalg ................................... Passed 0.05 sec 51/249 Test #23: unit_test_name ..................................... Passed 0.05 sec 52/249 Test #24: unit_test_objectfactory ............................ Passed 0.05 sec 53/249 Test #25: unit_test_optionshandler ........................... Passed 0.04 sec 54/249 Test #26: unit_test_property ................................. Passed 0.04 sec 55/249 Test #27: unit_test_reducededge .............................. Passed 0.04 sec 56/249 Test #28: unit_test_reducedgraph ............................. Passed 0.04 sec 57/249 Test #29: unit_test_structureparameters ...................... Passed 0.04 sec 58/249 Test #30: unit_test_table .................................... Passed 0.04 sec 59/249 Test #31: unit_test_thread ................................... Passed 0.03 sec 60/249 Test #32: unit_test_tokenizer ................................ Passed 0.03 sec 61/249 Test #33: unit_test_random ................................... Passed 0.03 sec 62/249 Test #34: unit_test_akimaspline .............................. Passed 0.03 sec 63/249 Test #35: unit_test_linspline ................................ Passed 0.03 sec 64/249 Test #36: unit_test_unitconverter ............................ Passed 0.03 sec 65/249 Test #37: unit_test_NDimVector ............................... Passed 0.02 sec 66/249 Test #38: unit_test_eigenio_matrixmarket ..................... Passed 0.02 sec test 48 Start 48: integration_csg_densityHelp 48: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_density "--help" 48: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 48: Test timeout computed to be: 1500 test 49 Start 49: integration_csg_imc_solveHelp 49: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_imc_solve "--help" 49: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools 49: Test timeout computed to be: 1500 test 51 Start 51: integration_Compare_csg_reupdate_output 51: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.pot.re" 51: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate 51: Test timeout computed to be: 1500 test 53 Start 53: integration_Compare_csg_reupdate_output2 53: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.pot.new.re" 53: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate2 53: Test timeout computed to be: 1500 test 54 Start 54: integration_Compare_csg_reupdate_output3 54: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.param.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.param.re" 54: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate2 54: Test timeout computed to be: 1500 test 57 Start 57: integration_Compare_csg_reupdate_gmx_output 57: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.pot.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.pot.new.re_gmx" 57: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx 57: Test timeout computed to be: 1500 test 58 Start 58: integration_Compare_csg_reupdate_gmx_output2 58: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.param.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.param.re_gmx" 58: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_reupdate_gmx 58: Test timeout computed to be: 1500 test 60 Start 60: integration_Compare_csg_fmatch_output 60: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.force.fmatch" 60: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch 60: Test timeout computed to be: 1500 test 66 Start 66: integration_Compare_csg_map_output 66: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "frame.dump" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump" 66: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_map 66: Test timeout computed to be: 1500 test 68 Start 68: integration_Compare_csg_map_gro_output 68: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "conf_cg.gro" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/conf_cg.gro" 68: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_map_gro 68: Test timeout computed to be: 1500 test 70 Start 70: integration_Compare_csg_stat_output1 70: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.rdf" 70: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat 70: Test timeout computed to be: 1500 test 71 Start 71: integration_Compare_csg_stat_output2 71: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.pmf" 71: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat 71: Test timeout computed to be: 1500 test 73 Start 73: integration_Compare_csg_stat_angular_output 73: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG-CG.angular" 73: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_angular 73: Test timeout computed to be: 1500 test 75 Start 75: integration_Compare_csg_stat-imc_output 75: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.imc" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.imc" 75: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc 75: Test timeout computed to be: 1500 test 76 Start 76: integration_Compare_csg_stat-imc_output_2 76: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.dist.new" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.dist.imc" 76: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc 76: Test timeout computed to be: 1500 test 77 Start 77: integration_Compare_csg_stat-imc_output_3 77: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.gmc" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.gmc" 77: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc 77: Test timeout computed to be: 1500 test 78 Start 78: integration_Compare_csg_stat-imc_output_4 78: Test command: /usr/bin/cmake "-E" "compare_files" "CG-CG.idx" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.idx" 78: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat-imc 78: Test timeout computed to be: 1500 test 80 Start 80: integration_Compare_csg_imc_solve_output 80: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.dpot.imc" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/imc/CG-CG.dpot.imc" 80: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve 80: Test timeout computed to be: 1500 test 82 Start 82: integration_Compare_csg_imc_solve_reg_output_2 82: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "LJ1-LJ1.dpot.imc" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/LJ1-LJ1.dpot.imc" 82: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg 82: Test timeout computed to be: 1500 test 83 Start 83: integration_Compare_csg_imc_solve_reg_output_3 83: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "LJ1-LJ2.dpot.imc" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/LJ1-LJ2.dpot.imc" 83: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg 83: Test timeout computed to be: 1500 test 84 Start 84: integration_Compare_csg_imc_solve_reg_output_4 84: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "LJ2-LJ2.dpot.imc" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/LJ2-LJ2.dpot.imc" 84: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_imc_solve_reg 84: Test timeout computed to be: 1500 test 86 Start 86: integration_Compare_csg_stat-imc_multi_output 86: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "all.imc" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/smaller_system/all.imc" 86: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi 86: Test timeout computed to be: 1500 test 87 Start 87: integration_Compare_csg_stat-imc_multi_output_2 87: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "all.gmc" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/smaller_system/all.gmc" 87: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi 87: Test timeout computed to be: 1500 test 88 Start 88: integration_Compare_csg_stat-imc_multi_output_3 88: Test command: /usr/bin/cmake "-E" "compare_files" "all.idx" "/build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/smaller_system/all.idx" 88: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_stat_imc_multi 88: Test timeout computed to be: 1500 test 90 Start 90: integration_Compare_csg_resample_akima_output 90: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "table_akima" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_akima" 90: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 90: Test timeout computed to be: 1500 test 92 Start 92: integration_Compare_csg_resample_cubic_output 92: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "table_cubic" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_cubic" 92: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 92: Test timeout computed to be: 1500 test 94 Start 94: integration_Compare_csg_resample_linear_output 94: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "table_linear" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_linear" 94: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 94: Test timeout computed to be: 1500 test 96 Start 96: integration_Compare_csg_resample_cubicfit_output 96: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "table_cubicfit" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_cubicfit" 96: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_resample 96: Test timeout computed to be: 1500 test 98 Start 98: integration_Compare_csg_dump_output 98: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump.out" "/build/reproducible-path/votca-2024/csg/src/tools/references/methanol-water//csg_dump.out" 98: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump 98: Test timeout computed to be: 1500 test 100 Start 100: integration_Compare_csg_dump_gro_output 100: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_gro.out" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/csg_dump_gro.out" 100: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump_gro 100: Test timeout computed to be: 1500 test 102 Start 102: integration_Compare_csg_dump_data_output 102: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_data.out" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols_cg/csg_dump_data.out" 102: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_dump_data 102: Test timeout computed to be: 1500 41: ================================================== 41: ======== VOTCA (http://www.votca.org) ======== 41: ================================================== 41: 41: please submit bugs to https://github.com/votca/votca/issues 41: 41: csg_dump, version 2024 (compiled Feb 29 2024, 03:52:32) 41: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 41: 41: Print atoms that are read from topology file to help debugging atom naming. 41: 41: 41: Allowed options: 41: -h [ --help ] display this help and exit 41: --verbose be loud and noisy 41: --verbose1 be very loud and noisy 41: -v [ --verbose2 ] be extremly loud and noisy 41: --top arg atomistic topology file 41: 41: Mapping options: 41: --cg arg [OPTIONAL] coarse graining mapping and bond 41: definitions 41: (xml-file). If no file is given, program acts on 41: original trajectory 41: --map-ignore arg list of molecules to ignore if mapping is done 41: separated by ; 41: 41: Specific options: 41: --excl display exclusion list instead of molecule list 41: 40: ================================================== 40: ======== VOTCA (http://www.votca.org) ======== 40: ================================================== 40: 40: please submit bugs to https://github.com/votca/votca/issues 40: 40: csg_map, version 2024 (compiled Feb 29 2024, 03:52:32) 40: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 40: 40: Convert a reference atomistic trajectory or configuration into a coarse-grained one 40: based on a mapping xml-file. The mapping can be applied to either an entire trajectory 40: or a selected set of frames only (see options). 40: Examples: 40: * csg_map --top FA-topol.tpr --trj FA-traj.trr --out CG-traj.xtc --cg cg-map.xml 40: * csg_map --top FA-topol.tpr --trj FA-conf.gro --out CG-conf.gro --cg cg-map.xml 40: * csg_map --top FA-topol.tpr --trj FA-traj.xtc --out FA-history.dlph --no-map 40: * csg_map --top FA-field.dlpf --trj FA-history.dlph --out CG-history.dlph --cg cg-map.xml 40: * csg_map --top .dlpf --trj .dlph --out .dlph --cg cg-map.xml convert HISTORY to HISTORY_CGV 40: 40: 40: 40: Allowed options: 40: -h [ --help ] display this help and exit 40: --verbose be loud and noisy 40: --verbose1 be very loud and noisy 40: -v [ --verbose2 ] be extremly loud and noisy 40: --top arg atomistic topology file 40: --out arg output file for coarse-grained trajectory 40: --vel Write mapped velocities (if available) 40: --force Write mapped forces (if available) 40: --hybrid Create hybrid trajectory containing both atomistic 40: and coarse-grained 40: 40: Mapping options: 40: --cg arg coarse graining mapping and bond definitions 40: (xml-file) 40: --map-ignore arg list of molecules to ignore separated by ; 40: --no-map disable mapping and act on original trajectory 40: 40: Trajectory options: 40: --trj arg atomistic trajectory file 40: --begin arg (=0) skip frames before this time (only works for 40: Gromacs files) 40: --first-frame arg (=0) start with this frame 40: --nframes arg process the given number of frames 40: 39: ================================================== 39: ======== VOTCA (http://www.votca.org) ======== 39: ================================================== 39: 39: please submit bugs to https://github.com/votca/votca/issues 39: 39: csg_reupdate, version 2024 (compiled Feb 29 2024, 03:52:32) 39: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 39: 39: computes relative entropy update. 39: 39: 39: Allowed options: 39: -h [ --help ] display this help and exit 39: --verbose be loud and noisy 39: --verbose1 be very loud and noisy 39: -v [ --verbose2 ] be extremly loud and noisy 39: --top arg atomistic topology file (only needed for 39: RE update) 39: 39: RE Specific options: 39: --options arg options file for coarse graining 39: --gentable arg (=0) only generate potential tables from given 39: parameters, NO RE update! 39: --interaction arg [OPTIONAL] generate potential tables only 39: for the specified interactions, 39: only valid when 'gentable' is true 39: --param-in-ext arg (=param.cur) Extension of the input parameter tables 39: --param-out-ext arg (=param.new) Extension of the output parameter tables 39: --pot-out-ext arg (=pot.new) Extension of the output potential tables 39: --hessian-check arg (=1) Disable the hessian check (mostly for 39: testing) 39: 39: Threading options: 39: --nt arg (=1) number of threads 39: 39: Trajectory options: 39: --trj arg atomistic trajectory file 39: --begin arg (=0) skip frames before this time (only works 39: for Gromacs files) 39: --first-frame arg (=0) start with this frame 39: --nframes arg process the given number of frames 39: 42: ================================================== 42: ======== VOTCA (http://www.votca.org) ======== 42: ================================================== 42: 42: please submit bugs to https://github.com/votca/votca/issues 42: 42: csg_property, version 2024 (compiled Feb 29 2024, 03:52:32) 42: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 42: 42: Helper program called by inverse scripts to parse xml file. 42: 42: Allowed options: 42: --help produce this help message 42: --path arg path to part of the xml file to print 42: --filter arg list option values that match given criteria 42: --print arg (=.) specifies which children or root to print 42: --file arg xml file to parse 42: --short short version of output 42: --with-path include path of node in output 42: 43: ================================================== 43: ======== VOTCA (http://www.votca.org) ======== 43: ================================================== 43: 43: please submit bugs to https://github.com/votca/votca/issues 43: 43: csg_resample, version 2024 (compiled Feb 29 2024, 03:52:32) 43: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 43: 43: Change grid and interval of any sort of table files. 43: Mainly called internally by inverse script, can also be 43: used to manually prepare input files for coarse-grained 43: simulations. 43: 43: Allowed options: 43: --help produce this help message 43: --in arg table to read 43: --out arg table to write 43: --derivative arg table to write 43: --grid arg new grid spacing (min:step:max). If 'grid' is specified 43: only, interpolation is performed. 43: --type arg (=akima) [cubic|akima|linear]. If option is not specified, the 43: default type 'akima' is assumed. 43: --fitgrid arg specify fit grid (min:step:max). If 'grid' and 43: 'fitgrid' are specified, a fit is performed. 43: --nocut Option for fitgrid: Normally, values out of fitgrid 43: boundaries are cut off. If they shouldn't, choose 43: --nocut. 43: --comment arg store a comment in the output table 43: --boundaries arg (natural|periodic|derivativezero) sets boundary 43: conditions 43: 44: ================================================== 44: ======== VOTCA (http://www.votca.org) ======== 44: ================================================== 44: 44: please submit bugs to https://github.com/votca/votca/issues 44: 44: csg_stat, version 2024 (compiled Feb 29 2024, 03:52:32) 44: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 44: 44: Calculate all distributions (bonded and non-bonded) specified in options file. 44: Optionally calculates update Eigen::Matrix3d for invere Monte Carlo. This program 44: is called inside the inverse scripts. Unlike csg_boltzmann, big systems 44: can be treated as well as non-bonded interactions can be evaluated. 44: 44: 44: Allowed options: 44: -h [ --help ] display this help and exit 44: --verbose be loud and noisy 44: --verbose1 be very loud and noisy 44: -v [ --verbose2 ] be extremly loud and noisy 44: --top arg atomistic topology file 44: 44: Mapping options: 44: --cg arg [OPTIONAL] coarse graining mapping and bond 44: definitions 44: (xml-file). If no file is given, program acts on 44: original trajectory 44: --map-ignore arg list of molecules to ignore if mapping is done 44: separated by ; 44: 44: Specific options: 44: --options arg options file for coarse graining 44: --do-imc write out additional Inverse Monte Carlo data 44: --include-intra do not exclude intramolecular neighbors 44: --block-length arg write blocks of this length, the averages are 44: cleared after every write 44: --ext arg (=dist.new) Extension of the output 44: 44: Threading options: 44: --nt arg (=1) number of threads 44: 44: Trajectory options: 44: --trj arg atomistic trajectory file 44: --begin arg (=0) skip frames before this time (only works for 44: Gromacs files) 44: --first-frame arg (=0) start with this frame 44: --nframes arg process the given number of frames 44: 46: ================================================== 46: ======== VOTCA (http://www.votca.org) ======== 46: ================================================== 46: 46: please submit bugs to https://github.com/votca/votca/issues 46: 46: csg_gmxtopol, version 2024 (compiled Feb 29 2024, 03:52:32) 46: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 46: 46: Create skeleton for gromacs topology based on atomistic topology 46: and a mapping file. File still needs to be modified by the user. 46: 46: 46: Allowed options: 46: -h [ --help ] display this help and exit 46: --verbose be loud and noisy 46: --verbose1 be very loud and noisy 46: -v [ --verbose2 ] be extremly loud and noisy 46: --top arg atomistic topology file 46: --out arg output topology (will create .top and in future also 46: .itp) 46: 46: Mapping options: 46: --cg arg coarse graining mapping and bond definitions 46: (xml-file) 46: --map-ignore arg list of molecules to ignore separated by ; 46: --no-map disable mapping and act on original trajectory 46: 45: ================================================== 45: ======== VOTCA (http://www.votca.org) ======== 45: ================================================== 45: 45: please submit bugs to https://github.com/votca/votca/issues 45: 45: csg_fmatch, version 2024 (compiled Feb 29 2024, 03:52:32) 45: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 45: 45: Perform force matching (also called multiscale coarse-graining) 45: 45: 45: Allowed options: 45: -h [ --help ] display this help and exit 45: --verbose be loud and noisy 45: --verbose1 be very loud and noisy 45: -v [ --verbose2 ] be extremly loud and noisy 45: --top arg atomistic topology file 45: --options arg options file for coarse graining 45: --trj-force arg coarse-grained trajectory containing forces of 45: already known interactions 45: 45: Mapping options: 45: --cg arg coarse graining mapping and bond definitions 45: (xml-file) 45: --map-ignore arg list of molecules to ignore separated by ; 45: --no-map disable mapping and act on original trajectory 45: 45: Trajectory options: 45: --trj arg atomistic trajectory file 45: --begin arg (=0) skip frames before this time (only works for 45: Gromacs files) 45: --first-frame arg (=0) start with this frame 45: --nframes arg process the given number of frames 45: 47: ================================================== 47: ======== VOTCA (http://www.votca.org) ======== 47: ================================================== 47: 47: please submit bugs to https://github.com/votca/votca/issues 47: 47: csg_dlptopol, version 2024 (compiled Feb 29 2024, 03:52:32) 47: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 47: 47: Create a dlpoly topology template based on an existing (atomistic) topology and 47: a mapping xml-file. The created template file needs to be inspected and amended by the user! 47: 47: Examples: 47: * csg_dlptopol --top .dlpf --out .dlpf --cg cg-map.xml 47: convert FIELD to FIELD_CGV using cg-map.xml 47: * csg_dlptopol --top FA-dlpoly.dlpf --out CG-dlpoly.dlpf --cg cg-map.xml 47: * csg_dlptopol --top FA-gromacs.tpr --out FA-dlpoly.dlpf --no-map 47: 47: 47: 47: Allowed options: 47: -h [ --help ] display this help and exit 47: --verbose be loud and noisy 47: --verbose1 be very loud and noisy 47: -v [ --verbose2 ] be extremly loud and noisy 47: --top arg atomistic topology file 47: --out arg output topology in dlpoly format 47: 47: Mapping options: 47: --cg arg coarse graining mapping and bond definitions 47: (xml-file) 47: --map-ignore arg list of molecules to ignore separated by ; 47: --no-map disable mapping and act on original trajectory 47: 48: ================================================== 48: ======== VOTCA (http://www.votca.org) ======== 48: ================================================== 48: 48: please submit bugs to https://github.com/votca/votca/issues 48: 48: csg_density, version 2024 (compiled Feb 29 2024, 03:52:32) 48: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 48: 48: Calculates the mass density distribution along a box axis or radial density profile from reference point 48: 48: 48: Allowed options: 48: -h [ --help ] display this help and exit 48: --verbose be loud and noisy 48: --verbose1 be very loud and noisy 48: -v [ --verbose2 ] be extremly loud and noisy 48: --top arg atomistic topology file 48: 48: Mapping options: 48: --cg arg [OPTIONAL] coarse graining mapping and bond 48: definitions 48: (xml-file). If no file is given, program acts on 48: original trajectory 48: --map-ignore arg list of molecules to ignore if mapping is done 48: separated by ; 48: 48: Specific options:: 48: --type arg (=mass) density type: mass or number 48: --axis arg (=r) [x|y|z|r] density axis (r=spherical) 48: --step arg (=0.01) spacing of density 48: --block-length arg write blocks of this length, the averages are 48: cleared after every write 48: --out arg Output file 48: --rmax arg rmax (default for [r] =min of all box vectors/2, else 48: l ) 48: --scale arg (=1) scale factor for the density 48: --molname arg (=*) molname 48: --filter arg (=*) filter bead names 48: --ref arg reference zero point 48: 48: Trajectory options: 48: --trj arg atomistic trajectory file 48: --begin arg (=0) skip frames before this time (only works for 48: Gromacs files) 48: --first-frame arg (=0) start with this frame 48: --nframes arg process the given number of frames 48: 49: ================================================== 49: ======== VOTCA (http://www.votca.org) ======== 49: ================================================== 49: 49: please submit bugs to https://github.com/votca/votca/issues 49: 49: csg_imc_solve, version 2024 (compiled Feb 29 2024, 03:52:32) 49: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 49: 49: Solves the linear system for IMCs 49: 49: 49: Allowed options: 49: -h [ --help ] display this help and exit 49: --verbose be loud and noisy 49: --verbose1 be very loud and noisy 49: -v [ --verbose2 ] be extremly loud and noisy 49: -r [ --regularization ] arg (=0) regularization factor 49: -i [ --imcfile ] arg imc statefile 49: -g [ --gmcfile ] arg gmc statefile 49: -n [ --idxfile ] arg idx statefile 49: 51: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.pot.re to a tolerance of 5e-05 53: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.pot.new.re to a tolerance of 5e-05 54: Comparing CG-CG.param.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.param.re to a tolerance of 5e-05 57: Comparing CG-CG.pot.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.pot.new.re_gmx to a tolerance of 5e-05 58: Comparing CG-CG.param.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.param.re_gmx to a tolerance of 5e-05 60: Comparing CG-CG.force and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.force.fmatch to a tolerance of 5e-05 68: Comparing conf_cg.gro and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/conf_cg.gro to a tolerance of 5e-05 76: Comparing CG-CG.dist.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.dist.imc to a tolerance of 5e-05 77: Comparing CG-CG.gmc and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.gmc to a tolerance of 5e-05 67/249 Test #39: integration_csg_reupdateHelp ....................... Passed 0.09 sec 68/249 Test #40: integration_csg_mapHelp ............................ Passed 0.09 sec 69/249 Test #41: integration_csg_dumpHelp ........................... Passed 0.09 sec 70/249 Test #42: integration_csg_propertyHelp ....................... Passed 0.09 sec 71/249 Test #43: integration_csg_resampleHelp ....................... Passed 0.08 sec 72/249 Test #44: integration_csg_statHelp ........................... Passed 0.08 sec 73/249 Test #45: integration_csg_fmatchHelp ......................... Passed 0.08 sec 74/249 Test #46: integration_csg_gmxtopolHelp ....................... Passed 0.08 sec 75/249 Test #47: integration_csg_dlptopolHelp ....................... Passed 0.08 sec 76/249 Test #48: integration_csg_densityHelp ........................ Passed 0.07 sec 77/249 Test #49: integration_csg_imc_solveHelp ...................... Passed 0.07 sec 78/249 Test #51: integration_Compare_csg_reupdate_output ............ Passed 0.07 sec 79/249 Test #53: integration_Compare_csg_reupdate_output2 ........... Passed 0.07 sec 80/249 Test #54: integration_Compare_csg_reupdate_output3 ........... Passed 0.06 sec 81/249 Test #57: integration_Compare_csg_reupdate_gmx_output ........ Passed 0.06 sec 82/249 Test #58: integration_Compare_csg_reupdate_gmx_output2 ....... Passed 0.06 sec 83/249 Test #60: integration_Compare_csg_fmatch_output .............. Passed 0.06 sec 84/249 Test #78: integration_Compare_csg_stat-imc_output_4 .......... Passed 0.04 sec 85/249 Test #88: integration_Compare_csg_stat-imc_multi_output_3 .... Passed 0.03 sec test 116 Start 116: integration_Compare_csg_property_output 116: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_property/csg_property.out" 116: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 116: Test timeout computed to be: 1500 test 118 Start 118: integration_Compare_csg_property_output2 118: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out2" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_property/csg_property.out2" 118: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 118: Test timeout computed to be: 1500 test 120 Start 120: integration_Compare_csg_property_output3 120: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out3" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_property/csg_property.out3" 120: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 120: Test timeout computed to be: 1500 test 122 Start 122: integration_Compare_csg_property_output4 122: Test command: /usr/bin/cmake "-E" "compare_files" "csg_property.out4" "/build/reproducible-path/votca-2024/csg/src/tools/references/csg_property/csg_property.out4" 122: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_property 122: Test timeout computed to be: 1500 test 125 Start 125: Compare_csg_boltzmann_output_ppy 125: Test command: /usr/bin/cmake "-E" "compare_files" "excl.txt" "/build/reproducible-path/votca-2024/csg/src/tools/references/ppy//excl.txt" 125: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_ppy 125: Test timeout computed to be: 1500 test 128 Start 128: Compare_csg_boltzmann_output_mma 128: Test command: /usr/bin/cmake "-E" "compare_files" "excl.txt" "/build/reproducible-path/votca-2024/csg/src/tools/references/mma//excl.txt" 128: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_boltzmann_mma 128: Test timeout computed to be: 1500 test 129 Start 129: fluctuationsHelp 129: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/fluctuations/csg_fluctuations "--help" 129: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 129: Test timeout computed to be: 1500 test 130 Start 130: orientcorrHelp 130: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/orientcorr/csg_orientcorr "--help" 130: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 130: Test timeout computed to be: 1500 test 131 Start 131: part_distHelp 131: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/part_dist/csg_part_dist "--help" 131: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 131: Test timeout computed to be: 1500 test 132 Start 132: partial_rdfHelp 132: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/partial_rdf/csg_partial_rdf "--help" 132: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 132: Test timeout computed to be: 1500 test 133 Start 133: radiiHelp 133: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/radii/csg_radii "--help" 133: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 133: Test timeout computed to be: 1500 test 134 Start 134: sphericalorderHelp 134: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/sphericalorder/csg_sphericalorder "--help" 134: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 134: Test timeout computed to be: 1500 test 135 Start 135: traj_forceHelp 135: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps/traj_force/csg_traj_force "--help" 135: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/csgapps 135: Test timeout computed to be: 1500 test 136 Start 136: unit_test_bead 136: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_bead 136: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 136: Test timeout computed to be: 1500 test 137 Start 137: unit_test_beadtriple 137: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadtriple 137: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 137: Test timeout computed to be: 1500 test 138 Start 138: unit_test_basebead 138: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_basebead 138: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 138: Test timeout computed to be: 1500 test 139 Start 139: unit_test_beadmotif_algorithms 139: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadmotif_algorithms 139: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 139: Test timeout computed to be: 1500 test 140 Start 140: unit_test_beadmotif_base 140: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadmotif_base 140: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 140: Test timeout computed to be: 1500 test 141 Start 141: unit_test_beadmotif_connector 141: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadmotif_connector 141: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 141: Test timeout computed to be: 1500 86/249 Test #68: integration_Compare_csg_map_gro_output ............. Passed 0.10 sec 87/249 Test #76: integration_Compare_csg_stat-imc_output_2 .......... Passed 0.09 sec 88/249 Test #77: integration_Compare_csg_stat-imc_output_3 .......... Passed 0.09 sec 73: Comparing CG-CG-CG.dist.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG-CG.angular to a tolerance of 5e-05 89/249 Test #73: integration_Compare_csg_stat_angular_output ........ Passed 0.09 sec 71: Comparing CG-CG.force.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.pmf to a tolerance of 5e-05 90/249 Test #71: integration_Compare_csg_stat_output2 ............... Passed 0.10 sec 70: Comparing CG-CG.dist.new and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.rdf to a tolerance of 5e-05 91/249 Test #70: integration_Compare_csg_stat_output1 ............... Passed 0.10 sec 66: Comparing frame.dump and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/frame.dump to a tolerance of 5e-05 75: Comparing CG-CG.imc and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.imc to a tolerance of 5e-05 83: Comparing LJ1-LJ2.dpot.imc and /build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/LJ1-LJ2.dpot.imc to a tolerance of 5e-05 92: Comparing table_cubic and /build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_cubic to a tolerance of 5e-05 84: Comparing LJ2-LJ2.dpot.imc and /build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/LJ2-LJ2.dpot.imc to a tolerance of 5e-05 82: Comparing LJ1-LJ1.dpot.imc and /build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/LJ1-LJ1.dpot.imc to a tolerance of 5e-05 80: Comparing CG-CG.dpot.imc and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/imc/CG-CG.dpot.imc to a tolerance of 5e-05 96: Comparing table_cubicfit and /build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_cubicfit to a tolerance of 5e-05 86: Comparing all.imc and /build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/smaller_system/all.imc to a tolerance of 5e-05 90: Comparing table_akima and /build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_akima to a tolerance of 5e-05 94: Comparing table_linear and /build/reproducible-path/votca-2024/csg/src/tools/references/csg_resample/table_linear to a tolerance of 5e-05 129: ================================================== 129: ======== VOTCA (http://www.votca.org) ======== 129: ================================================== 129: 129: please submit bugs to https://github.com/votca/votca/issues 129: 129: fluctuations, version 2024 (compiled Feb 29 2024, 03:52:32) 129: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 129: 129: calculate density fluctuations in subvolumes of the simulation box.Subolumes can be either cubic slabs in dimensions (x|y|z) or sphericalslabs with respect to either the center of box or a reference molecule 129: 129: 129: Allowed options: 129: -h [ --help ] display this help and exit 129: --verbose be loud and noisy 129: --verbose1 be very loud and noisy 129: -v [ --verbose2 ] be extremly loud and noisy 129: --top arg atomistic topology file 129: 129: Fluctuation options: 129: --filter arg (=*) filter molecule names 129: --rmax arg maximal distance to be considered 129: --rmin arg (=0) minimal distance to be considered 129: --refmol arg Reference molecule 129: --nbin arg (=100) Number of bins 129: --geometry arg (sphere|x|y|z) Take radial or x, y, z 129: slabs from rmin to rmax 129: --outfile arg (=fluctuations.dat) Output file 129: 129: Mapping options: 129: --cg arg coarse graining mapping and bond 129: definitions (xml-file) 129: --map-ignore arg list of molecules to ignore separated by 129: ; 129: --no-map disable mapping and act on original 129: trajectory 129: 129: Trajectory options: 129: --trj arg atomistic trajectory file 129: --begin arg (=0) skip frames before this time (only works 129: for Gromacs files) 129: --first-frame arg (=0) start with this frame 129: --nframes arg process the given number of frames 129: 130: ================================================== 130: ======== VOTCA (http://www.votca.org) ======== 130: ================================================== 130: 130: please submit bugs to https://github.com/votca/votca/issues 130: 130: orientcorr, version 2024 (compiled Feb 29 2024, 03:52:32) 130: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 130: 130: Calculates the orientational correlation function 130: <3/2*u(0)*u(r) - 1/2> 130: for a polymer melt, where u is the vector pointing along a bond and 130: r the distance between bond segments (centered on middle of bond). 130: 130: The output is correlation.dat (with intra-molecular contributions) and 130: correlation_excl.dat, where inter-molecular contributions are excluded. 130: 130: 130: Allowed options: 130: -h [ --help ] display this help and exit 130: --verbose be loud and noisy 130: --verbose1 be very loud and noisy 130: -v [ --verbose2 ] be extremly loud and noisy 130: --top arg atomistic topology file 130: 130: Neighbor search options: 130: -c [ --cutoff ] arg (=1) cutoff for the neighbor search 130: --nbins arg (=40) number of bins for the grid 130: --nbmethod arg (=grid) neighbor search algorithm (simple or grid) 130: 130: Threading options: 130: --nt arg (=1) number of threads 130: 130: Trajectory options: 130: --trj arg atomistic trajectory file 130: --begin arg (=0) skip frames before this time (only works for 130: Gromacs files) 130: --first-frame arg (=0) start with this frame 130: --nframes arg process the given number of frames 130: 131: ================================================== 131: ======== VOTCA (http://www.votca.org) ======== 131: ================================================== 131: 131: please submit bugs to https://github.com/votca/votca/issues 131: 131: csg_part_dist, version 2024 (compiled Feb 29 2024, 03:52:32) 131: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 131: 131: This program reads a topology and (set of) trajectory(ies). For every 131: binned value of a chosen coordinate, it outputs the time-averaged number of 131: particles, listed by particle types. 131: 131: Allowed options: 131: --top arg topology file 131: --trj arg trajectory file 131: --grid arg output grid spacing (min:step:max) 131: --out arg output particle distribution table 131: --ptypes arg particle types to include in the analysis 131: arg: file - particle types separated by space 131: default: all particle types 131: --first_frame arg first frame considered for analysis 131: --last_frame arg last frame considered for analysis 131: --coord arg coordinate analyzed ('x', 'y', or 'z' (default)) 131: --shift_com shift center of mass to zero 131: --comment arg store a comment in the output table 131: --help produce this help message 131: 132: ================================================== 132: ======== VOTCA (http://www.votca.org) ======== 132: ================================================== 132: 132: please submit bugs to https://github.com/votca/votca/issues 132: 132: csg_partial_rdf, version 2024 (compiled Feb 29 2024, 03:52:32) 132: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 132: 132: Calculate spatially confined rdfs 132: 132: 132: Allowed options: 132: -h [ --help ] display this help and exit 132: --verbose be loud and noisy 132: --verbose1 be very loud and noisy 132: -v [ --verbose2 ] be extremly loud and noisy 132: --top arg atomistic topology file 132: 132: Mapping options: 132: --cg arg [OPTIONAL] coarse graining mapping and bond 132: definitions 132: (xml-file). If no file is given, program acts on 132: original trajectory 132: --map-ignore arg list of molecules to ignore if mapping is done 132: separated by ; 132: 132: Specific options: 132: --options arg options file defining the rdfs 132: --subvolume_radius arg Rdf calc. in spherical subvolume of this radius (from 132: center of box) 132: --do-vol-corr Correct for subvolume truncation in rdf 132: --write-every arg (UNIMPLEMENTED) write after every block of this 132: length, if --blocking is set, the averages are 132: cleared after every output 132: --do-blocks write output for blocking analysis 132: 132: Threading options: 132: --nt arg (=1) number of threads 132: 132: Trajectory options: 132: --trj arg atomistic trajectory file 132: --begin arg (=0) skip frames before this time (only works for 132: Gromacs files) 132: --first-frame arg (=0) start with this frame 132: --nframes arg process the given number of frames 132: 92/249 Test #66: integration_Compare_csg_map_output ................. Passed 0.10 sec 93/249 Test #75: integration_Compare_csg_stat-imc_output ............ Passed 0.09 sec 94/249 Test #80: integration_Compare_csg_imc_solve_output ........... Passed 0.09 sec 95/249 Test #82: integration_Compare_csg_imc_solve_reg_output_2 ..... Passed 0.08 sec 96/249 Test #83: integration_Compare_csg_imc_solve_reg_output_3 ..... Passed 0.08 sec 97/249 Test #84: integration_Compare_csg_imc_solve_reg_output_4 ..... Passed 0.08 sec 98/249 Test #86: integration_Compare_csg_stat-imc_multi_output ...... Passed 0.08 sec 99/249 Test #90: integration_Compare_csg_resample_akima_output ...... Passed 0.07 sec 100/249 Test #92: integration_Compare_csg_resample_cubic_output ...... Passed 0.07 sec 101/249 Test #94: integration_Compare_csg_resample_linear_output ..... Passed 0.07 sec 102/249 Test #96: integration_Compare_csg_resample_cubicfit_output ... Passed 0.06 sec 103/249 Test #98: integration_Compare_csg_dump_output ................ Passed 0.06 sec 104/249 Test #100: integration_Compare_csg_dump_gro_output ............ Passed 0.06 sec 105/249 Test #102: integration_Compare_csg_dump_data_output ........... Passed 0.06 sec 106/249 Test #116: integration_Compare_csg_property_output ............ Passed 0.04 sec 107/249 Test #118: integration_Compare_csg_property_output2 ........... Passed 0.04 sec 108/249 Test #120: integration_Compare_csg_property_output3 ........... Passed 0.04 sec 109/249 Test #122: integration_Compare_csg_property_output4 ........... Passed 0.04 sec 110/249 Test #125: Compare_csg_boltzmann_output_ppy ................... Passed 0.04 sec 111/249 Test #128: Compare_csg_boltzmann_output_mma ................... Passed 0.03 sec 112/249 Test #129: fluctuationsHelp ................................... Passed 0.03 sec 113/249 Test #130: orientcorrHelp ..................................... Passed 0.03 sec 114/249 Test #131: part_distHelp ...................................... Passed 0.03 sec test 142 Start 142: unit_test_beadstructure_base 142: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadstructure_base 142: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 142: Test timeout computed to be: 1500 test 143 Start 143: unit_test_beadstructure_algorithms 143: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_beadstructure_algorithms 143: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 143: Test timeout computed to be: 1500 test 144 Start 144: unit_test_bondedstatistics 144: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_bondedstatistics 144: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 144: Test timeout computed to be: 1500 test 145 Start 145: unit_test_csg_topology 145: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_csg_topology 145: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 145: Test timeout computed to be: 1500 test 146 Start 146: unit_test_interaction 146: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_interaction 146: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 146: Test timeout computed to be: 1500 test 147 Start 147: unit_test_lammpsdatareader 147: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_lammpsdatareader 147: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 147: Test timeout computed to be: 1500 test 148 Start 148: unit_test_lammpsdumpreaderwriter 148: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_lammpsdumpreaderwriter 148: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 148: Test timeout computed to be: 1500 test 149 Start 149: unit_test_nblist_3body 149: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_nblist_3body 149: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 149: Test timeout computed to be: 1500 test 150 Start 150: unit_test_nblistgrid_3body 150: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_nblistgrid_3body 150: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 150: Test timeout computed to be: 1500 test 151 Start 151: unit_test_boundarycondition 151: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_boundarycondition 151: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 151: Test timeout computed to be: 1500 test 152 Start 152: unit_test_pdbreader 152: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_pdbreader 152: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 152: Test timeout computed to be: 1500 test 153 Start 153: unit_test_tabulatedpotential 153: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_tabulatedpotential 153: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 153: Test timeout computed to be: 1500 test 154 Start 154: unit_test_triplelist 154: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests/unit_test_triplelist 154: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tests 154: Test timeout computed to be: 1500 test 155 Start 155: unit_iie.py 155: Test command: /usr/bin/python3 "-m" "pytest" "-q" "/build/reproducible-path/votca-2024/csg/share/scripts/inverse/iie.py" 155: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/scripts/inverse 155: Test timeout computed to be: 1500 test 156 Start 156: unit_check_csg_xml.py 156: Test command: /usr/bin/python3 "-m" "pytest" "-q" "/build/reproducible-path/votca-2024/csg/share/scripts/inverse/check_csg_xml.py" 156: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/scripts/inverse 156: Test timeout computed to be: 1500 test 157 Start 157: template_serialHelp 157: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template/template_serial "--help" 157: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template 157: Test timeout computed to be: 1500 test 158 Start 158: template_threadedHelp 158: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template/template_threaded "--help" 158: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/share/template 158: Test timeout computed to be: 1500 test 159 Start 159: integration_xtp_mapHelp 159: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/xtp_map "--help" 159: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools 159: Test timeout computed to be: 1500 test 160 Start 160: integration_xtp_runHelp 160: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/xtp_run "--help" 160: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools 160: Test timeout computed to be: 1500 test 161 Start 161: integration_xtp_toolsHelp 161: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/xtp_tools "--help" 161: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools 161: Test timeout computed to be: 1500 test 162 Start 162: integration_xtp_parallelHelp 162: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools/xtp_parallel "--help" 162: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tools 162: Test timeout computed to be: 1500 test 163 Start 163: unit_test_adiis 163: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_adiis 163: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_adiis 163: Test timeout computed to be: 1500 test 164 Start 164: unit_test_aobasis 164: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aobasis 164: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aobasis 164: Test timeout computed to be: 1500 test 165 Start 165: unit_test_aomatrix 165: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aomatrix 165: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aomatrix 165: Test timeout computed to be: 1500 test 166 Start 166: unit_test_aomatrix3d 166: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aomatrix3d 166: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aomatrix3d 166: Test timeout computed to be: 1500 test 167 Start 167: unit_test_aotransform 167: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aotransform 167: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aotransform 167: Test timeout computed to be: 1500 test 168 Start 168: unit_test_aopotential 168: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aopotential 168: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aopotential 168: Test timeout computed to be: 1500 test 169 Start 169: unit_test_atom 169: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_atom 169: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_atom 169: Test timeout computed to be: 1500 test 170 Start 170: unit_test_qmatom 170: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmatom 170: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmatom 170: Test timeout computed to be: 1500 115/249 Test #132: partial_rdfHelp .................................... Passed 0.08 sec 133: ================================================== 133: ======== VOTCA (http://www.votca.org) ======== 133: ================================================== 133: 133: please submit bugs to https://github.com/votca/votca/issues 133: 133: radii, version 2024 (compiled Feb 29 2024, 03:52:32) 133: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 133: 133: calculate gyration- and hydrodynamic radius for a specific molecule or molecule type 133: 133: 133: Allowed options: 133: -h [ --help ] display this help and exit 133: --verbose be loud and noisy 133: --verbose1 be very loud and noisy 133: -v [ --verbose2 ] be extremly loud and noisy 133: --top arg atomistic topology file 133: 133: Molecule filter options: 133: --mol arg molecule number 133: --molname arg (=*) pattern for molecule name 133: 133: Trajectory options: 133: --trj arg atomistic trajectory file 133: --begin arg (=0) skip frames before this time (only works for 133: Gromacs files) 133: --first-frame arg (=0) start with this frame 133: --nframes arg process the given number of frames 133: 116/249 Test #133: radiiHelp .......................................... Passed 0.08 sec 134: ================================================== 134: ======== VOTCA (http://www.votca.org) ======== 134: ================================================== 134: 134: please submit bugs to https://github.com/votca/votca/issues 134: 134: sphericalorder, version 2024 (compiled Feb 29 2024, 03:52:32) 134: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 134: 134: !! EXPERIMENTAL !! Calculate spherical order parameter. 134: Needs non-spherical beads in mapping. 134: 134: 134: 134: 134: Allowed options: 134: -h [ --help ] display this help and exit 134: --verbose be loud and noisy 134: --verbose1 be very loud and noisy 134: -v [ --verbose2 ] be extremly loud and noisy 134: --top arg atomistic topology file 134: --filter arg (=*) filter molecule names 134: --radialcut arg (=0) radial cutoff: distance from center where bead is 134: considered 134: --minrad arg (=0) minimal distance a parcle has to be apart from center 134: to be considerd 134: --refmol arg Reference molecule 134: --rbinw arg (=0) Do multiple r_bins multiple histograms 134: 134: Mapping options: 134: --cg arg coarse graining mapping and bond definitions 134: (xml-file) 134: --map-ignore arg list of molecules to ignore separated by ; 134: --no-map disable mapping and act on original trajectory 134: 134: Trajectory options: 134: --trj arg atomistic trajectory file 134: --begin arg (=0) skip frames before this time (only works for 134: Gromacs files) 134: --first-frame arg (=0) start with this frame 134: --nframes arg process the given number of frames 134: 117/249 Test #134: sphericalorderHelp ................................. Passed 0.08 sec 87: Comparing all.gmc and /build/reproducible-path/votca-2024/csg/src/tools/references/LJ1-LJ2/smaller_system/all.gmc to a tolerance of 5e-05 135: ================================================== 135: ======== VOTCA (http://www.votca.org) ======== 135: ================================================== 135: 135: please submit bugs to https://github.com/votca/votca/issues 135: 135: traj_force, version 2024 (compiled Feb 29 2024, 03:52:32) 135: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 135: 135: Adds/subtracts forces from given atomistic trajectories 135: 135: 135: Allowed options: 135: -h [ --help ] display this help and exit 135: --verbose be loud and noisy 135: --verbose1 be very loud and noisy 135: -v [ --verbose2 ] be extremly loud and noisy 135: --top arg atomistic topology file 135: --scale arg (=-1) scaling factor for trajectory forces 135: --trj-force arg atomistic reference trajectory containing forces to 135: add/subtract 135: --out arg output trajectory file with resultant forces 135: 135: Trajectory options: 135: --trj arg atomistic trajectory file 135: --begin arg (=0) skip frames before this time (only works for 135: Gromacs files) 135: --first-frame arg (=0) start with this frame 135: --nframes arg process the given number of frames 135: 103: Number of degrees of freedom in T-Coupling group System is 15.00 103: 103: There were 2 NOTEs 103: 103: GROMACS reminds you: "Chemistry: It tends to be a messy science." (Gunnar von Heijne, former chair of the Nobel Committee for chemistry) 103: 103: Setting the LD random seed to -1149248794 103: 103: Generated 330891 of the 330891 non-bonded parameter combinations 103: 103: Generated 330891 of the 330891 1-4 parameter combinations 103: 103: Excluding 2 bonded neighbours molecule type 'SOL' 103: Analysing residue names: 103: There are: 3 Water residues 103: 103: Determining Verlet buffer for a tolerance of 0.005 kJ/mol/ps at 300 K 103: 103: Calculated rlist for 1x1 atom pair-list as 0.900 nm, buffer size 0.000 nm 103: 103: Set rlist, assuming 4x4 atom pair-list, to 0.900 nm, buffer size 0.000 nm 103: 103: Note that mdrun will redetermine rlist based on the actual pair-list setup 103: 103: This run will generate roughly 0 Mb of data 136: Running 3 test cases... 136: 136: *** No errors detected 136:  138: Running 2 test cases... 138: 138: *** No errors detected 138:  137: Running 1 test case... 137: 137: *** No errors detected 137:  141: Running 3 test cases... 141: 141: *** No errors detected 141:  140: Running 4 test cases... 140: 140: *** No errors detected 140:  139: Running 4 test cases... 139: 139: *** No errors detected 139:  142: Running 10 test cases... 142: 142: *** No errors detected 142:  143: Running 1 test case... 143: Calling break into structures 143: Bead Count 1 3 143: Bead Count 2 5 143: 143: *** No errors detected 143:  144: Running 3 test cases... 144: 144: *** No errors detected 144:  145: Running 6 test cases... 145: interaction name :bond 145: interaction name :bond 145: 145: *** No errors detected 145:  146: Running 5 test cases... 146: molecule 1:large 1:index 1 146: molecule 1:medium 1:index 1 146: molecule 1:small 1:index 1 146: 146: *** No errors detected 146:  147: Running 3 test cases... 147: 147: WARNING: The votca lammps data reader is only able to read lammps files formatted in the following styles: 147: angle 147: atom 147: bond 147: full 147: molecule 147: 147: These styles use the following formats in the atom block: 147: atom-ID molecule-ID atom-type charge x y z 147: atom-ID molecule-ID atom-type charge x y z nx ny nz 147: atom-ID molecule-ID atom-type x y z 147: atom-ID molecule-ID atom-type x y z nx ny nz 147: atom-ID atom-type x y z 147: atom-ID atom-type x y z nx ny nz 147: 147: 147: WARNING: The votca lammps data reader is only able to read lammps files formatted in the following styles: 147: angle 147: atom 147: bond 147: full 147: molecule 147: 147: These styles use the following formats in the atom block: 147: atom-ID molecule-ID atom-type charge x y z 147: atom-ID molecule-ID atom-type charge x y z nx ny nz 147: atom-ID molecule-ID atom-type x y z 147: atom-ID molecule-ID atom-type x y z nx ny nz 147: atom-ID atom-type x y z 147: atom-ID atom-type x y z nx ny nz 147: 147: 6.57991 147: 5.10424 147: 5.84802 147: 6.57991 147: 5.10424 147: 5.84802 147: 10.8431 147: 8.3947 147: 6.85254 147: 10.8431 147: 8.3947 147: 6.85254 147: 147: WARNING: The votca lammps data reader is only able to read lammps files formatted in the following styles: 147: angle 147: atom 147: bond 147: full 147: molecule 147: 147: These styles use the following formats in the atom block: 147: atom-ID molecule-ID atom-type charge x y z 147: atom-ID molecule-ID atom-type charge x y z nx ny nz 147: atom-ID molecule-ID atom-type x y z 147: atom-ID molecule-ID atom-type x y z nx ny nz 147: atom-ID atom-type x y z 147: atom-ID atom-type x y z nx ny nz 147: 147: WARNING: Lammps Atoms 1 and 6 belong to different molecules (1:2) 147: WARNING: Lammps Atoms 0 and 5 belong to different molecules (1:2) 147: WARNING: Lammps Atoms -1 and 4 belong to different molecules (1:2) 147: 147: WARNING: The votca lammps data reader is only able to read lammps files formatted in the following styles: 147: angle 147: atom 147: bond 147: full 147: molecule 147: 147: These styles use the following formats in the atom block: 147: atom-ID molecule-ID atom-type charge x y z 147: atom-ID molecule-ID atom-type charge x y z nx ny nz 147: atom-ID molecule-ID atom-type x y z 147: atom-ID molecule-ID atom-type x y z nx ny nz 147: atom-ID atom-type x y z 147: atom-ID atom-type x y z nx ny nz 147: 147: 147: *** No errors detected 147:  148: Running 2 test cases... 148: Reading frame, timestep 1 148: Reading frame, timestep 1 148: 148: *** No errors detected 148:  149: Running 2 test cases... 149: 149: *** No errors detected 149:  150: Running 2 test cases... 150: 150: *** No errors detected 150:  151: Running 3 test cases... 151: 151: *** No errors detected 151:  152: Running 1 test case... 152: The VOTCA pdb reader attempts to follow the official format: 152: http://www.wwpdb.org/documentation/file-format 152: 152: NOTE the element symbol is important for associating a mass with 152: each atom, if no element symbol is specified the atom name will be 152: used and assumed to be an element symbol. 152: The pdb file format does not support pseudo atoms such as a CH3 152: and thus VOTCA cannot read such atoms in when using a .pdb file. 152: If you need to use pseudo atoms consider using a different file 152: format such as the lammps data format. 152: WARNING no charge was specified for 152: HETATM 1 C UNL 1 -5.249 1.055 -0.000 1.00 0.00 C 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 2 H UNL 1 -6.202 1.521 -0.141 1.00 0.00 H 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 3 H UNL 1 -5.390 0.026 0.255 1.00 0.00 H 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 4 H UNL 1 -4.682 1.124 -0.904 1.00 0.00 H 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 5 H UNL 1 -4.724 1.550 0.790 1.00 0.00 H 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 6 C UNL 2 -2.248 1.671 -0.000 1.00 0.00 C 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 7 H UNL 2 -1.518 2.451 0.051 1.00 0.00 H 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 8 H UNL 2 -3.153 1.999 0.467 1.00 0.00 H 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 9 H UNL 2 -2.442 1.430 -1.024 1.00 0.00 H 152: Assuming a charge of 0 152: WARNING no charge was specified for 152: HETATM 10 H UNL 2 -1.880 0.804 0.507 1.00 0.00 H 152: Assuming a charge of 0 152: Consistency check for pdbreader 152: Molecule 0 152: Atoms: 6 7 8 9 10 152: Molecule 1 152: Atoms: 1 2 3 4 5 152: 152: 152: *** No errors detected 152:  153: Running 3 test cases... 153: Number of H2 96 153: bonded_values after pulling out of statistics 4560 154: Running 2 test cases... 154: 154: *** No errors detected 154:  157: ================================================== 157: ======== VOTCA (http://www.votca.org) ======== 157: ================================================== 157: 157: please submit bugs to https://github.com/votca/votca/issues 157: 157: template_nblist, version 2024 (compiled Feb 29 2024, 03:52:32) 157: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 157: 157: rough template for rdf calculations 157: 157: 157: Allowed options: 157: -h [ --help ] display this help and exit 157: --verbose be loud and noisy 157: --verbose1 be very loud and noisy 157: -v [ --verbose2 ] be extremly loud and noisy 157: --top arg atomistic topology file 157: 157: RDF options: 157: --c arg (=1) the cutoff 157: 157: Trajectory options: 157: --trj arg atomistic trajectory file 157: --begin arg (=0) skip frames before this time (only works for 157: Gromacs files) 157: --first-frame arg (=0) start with this frame 157: --nframes arg process the given number of frames 157: 158: ================================================== 158: ======== VOTCA (http://www.votca.org) ======== 158: ================================================== 158: 158: please submit bugs to https://github.com/votca/votca/issues 158: 158: template_threaded_rdf, version 2024 (compiled Feb 29 2024, 03:52:32) 158: gromacs, 2024.1-Debian_2024.1_1+b1 (double precision) 158: 158: template for threaded rdf calculations 158: 158: 158: Allowed options: 158: -h [ --help ] display this help and exit 158: --verbose be loud and noisy 158: --verbose1 be very loud and noisy 158: -v [ --verbose2 ] be extremly loud and noisy 158: --top arg atomistic topology file 158: 158: RDF options: 158: --c arg (=1) the cutoff 158: 158: Threading options: 158: --nt arg (=1) number of threads 158: 158: Trajectory options: 158: --trj arg atomistic trajectory file 158: --begin arg (=0) skip frames before this time (only works for 158: Gromacs files) 158: --first-frame arg (=0) start with this frame 158: --nframes arg process the given number of frames 158: 160: ================================================== 160: ======== VOTCA (http://www.votca.org) ======== 160: ================================================== 160: 160: please submit bugs to https://github.com/votca/votca/issues 160: 160: xtp_run, version 2024 (compiled Feb 29 2024, 03:52:32) 160: 160: Runs excitation/charge transport calculators 160: 160: 160: 160: Allowed options: 160: -h [ --help ] display this help and exit 160: --verbose be loud and noisy 160: --verbose1 be very loud and noisy 160: -v [ --verbose2 ] be extremly loud and noisy 160: -o [ --options ] arg Calculator user options. 160: -t [ --nthreads ] arg (=1) number of threads to create 160: -e [ --execute ] arg Name of Calculator to run 160: -l [ --list ] Lists all available Calculators 160: -d [ --description ] arg Short description of a Calculators 160: -c [ --cmdoptions ] arg Modify options via command line by e.g. '-c 160: xmltag.subtag=value'. Use whitespace to 160: separate multiple options 160: -p [ --printoptions ] arg Prints xml options of a Calculator 160: -f [ --file ] arg hdf5 state file, *.hdf5 160: -i [ --first-frame ] arg (=0) start from this frame 160: -n [ --nframes ] arg (=1) number of frames to process 160: -s [ --save ] arg (=1) whether or not to save changes to state file 160: 118/249 Test #103: integration_Run_gmx_grompp ......................... Passed 0.35 sec 119/249 Test #87: integration_Compare_csg_stat-imc_multi_output_2 .... Passed 0.14 sec 120/249 Test #135: traj_forceHelp ..................................... Passed 0.09 sec 121/249 Test #136: unit_test_bead ..................................... Passed 0.08 sec 122/249 Test #137: unit_test_beadtriple ............................... Passed 0.08 sec 123/249 Test #138: unit_test_basebead ................................. Passed 0.08 sec 124/249 Test #139: unit_test_beadmotif_algorithms ..................... Passed 0.08 sec 125/249 Test #140: unit_test_beadmotif_base ........................... Passed 0.08 sec 126/249 Test #141: unit_test_beadmotif_connector ...................... Passed 0.08 sec 127/249 Test #142: unit_test_beadstructure_base ....................... Passed 0.07 sec 128/249 Test #143: unit_test_beadstructure_algorithms ................. Passed 0.07 sec 129/249 Test #144: unit_test_bondedstatistics ......................... Passed 0.07 sec 130/249 Test #145: unit_test_csg_topology ............................. Passed 0.06 sec 131/249 Test #146: unit_test_interaction .............................. Passed 0.06 sec 132/249 Test #147: unit_test_lammpsdatareader ......................... Passed 0.06 sec 133/249 Test #148: unit_test_lammpsdumpreaderwriter ................... Passed 0.06 sec 134/249 Test #149: unit_test_nblist_3body ............................. Passed 0.06 sec 135/249 Test #150: unit_test_nblistgrid_3body ......................... Passed 0.06 sec 136/249 Test #151: unit_test_boundarycondition ........................ Passed 0.05 sec 137/249 Test #152: unit_test_pdbreader ................................ Passed 0.05 sec 138/249 Test #154: unit_test_triplelist ............................... Passed 0.05 sec 139/249 Test #157: template_serialHelp ................................ Passed 0.04 sec 140/249 Test #158: template_threadedHelp .............................. Passed 0.04 sec test 110 Start 110: integration_Run_gmx_mdrun 110: Test command: /usr/bin/gmx_d "mdrun" 110: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 110: Test timeout computed to be: 1500 test 104 Start 104: integration_Run_csg_dump_gmx_tpr 104: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --top topol.tpr > csg_dump_tpr.out" 104: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 104: Test timeout computed to be: 1500 test 106 Start 106: integration_Run_csg_dump_gmx_tpr_excl 106: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --excl --top topol.tpr > csg_dump_tpr_excl.out" 106: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 106: Test timeout computed to be: 1500 test 108 Start 108: integration_Run_csg_dump_gmx_tpr_cg 108: Test command: /usr/bin/bash "-c" "/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_dump --cg /build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/../mapping.xml --top topol.tpr > csg_dump_tpr_cg.out" 108: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 108: Test timeout computed to be: 1500 test 171 Start 171: unit_test_polarsegment 171: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_polarsegment 171: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_polarsegment 171: Test timeout computed to be: 1500 test 172 Start 172: unit_test_qmmolecule 172: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmmolecule 172: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmmolecule 172: Test timeout computed to be: 1500 test 173 Start 173: unit_test_basisset 173: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_basisset 173: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_basisset 173: Test timeout computed to be: 1500 test 174 Start 174: unit_test_bseoperator_btda 174: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bseoperator_btda 174: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bseoperator_btda 174: Test timeout computed to be: 1500 test 175 Start 175: unit_test_bfgs_trm 175: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bfgs_trm 175: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bfgs_trm 175: Test timeout computed to be: 1500 test 176 Start 176: unit_test_bse 176: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bse 176: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bse 176: Test timeout computed to be: 1500 test 177 Start 177: unit_test_convergenceacc 177: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_convergenceacc 177: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_convergenceacc 177: Test timeout computed to be: 1500 test 178 Start 178: unit_test_dftcoupling 178: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_dftcoupling 178: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_dftcoupling 178: Test timeout computed to be: 1500 test 179 Start 179: unit_test_diis 179: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_diis 179: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_diis 179: Test timeout computed to be: 1500 test 180 Start 180: unit_test_ecpaobasis 180: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_ecpaobasis 180: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_ecpaobasis 180: Test timeout computed to be: 1500 test 181 Start 181: unit_test_eigen 181: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_eigen 181: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_eigen 181: Test timeout computed to be: 1500 test 182 Start 182: unit_test_eris 182: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_eris 182: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_eris 182: Test timeout computed to be: 1500 test 183 Start 183: unit_test_espfit 183: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_espfit 183: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_espfit 183: Test timeout computed to be: 1500 test 184 Start 184: unit_test_glink 184: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_glink 184: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_glink 184: Test timeout computed to be: 1500 test 185 Start 185: unit_test_hdf5 185: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_hdf5 185: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_hdf5 185: Test timeout computed to be: 1500 test 186 Start 186: unit_test_cubefile_writer 186: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_cubefile_writer 186: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_cubefile_writer 186: Test timeout computed to be: 1500 test 187 Start 187: unit_test_densityintegration 187: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_densityintegration 187: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_densityintegration 187: Test timeout computed to be: 1500 test 188 Start 188: unit_test_vxc_potential 188: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_vxc_potential 188: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_vxc_potential 188: Test timeout computed to be: 1500 test 189 Start 189: unit_test_vxc_grid 189: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_vxc_grid 189: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_vxc_grid 189: Test timeout computed to be: 1500 test 190 Start 190: unit_test_regular_grid 190: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_regular_grid 190: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_regular_grid 190: Test timeout computed to be: 1500 test 191 Start 191: unit_test_orbitals 191: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_orbitals 191: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_orbitals 191: Test timeout computed to be: 1500 test 192 Start 192: unit_test_polarsite 192: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_polarsite 192: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_polarsite 192: Test timeout computed to be: 1500 141/249 Test #160: integration_xtp_runHelp ............................ Passed 0.25 sec 159: ================================================== 159: ======== VOTCA (http://www.votca.org) ======== 159: ================================================== 159: 159: please submit bugs to https://github.com/votca/votca/issues 159: 159: xtp_map, version 2024 (compiled Feb 29 2024, 03:52:32) 159: 159: Generates QM|MD topology 159: 159: 159: 159: Allowed options: 159: -h [ --help ] display this help and exit 159: --verbose be loud and noisy 159: --verbose1 be very loud and noisy 159: -v [ --verbose2 ] be extremly loud and noisy 159: -t [ --topology ] arg topology 159: -c [ --coordinates ] arg coordinates or trajectory 159: -s [ --segments ] arg definition of segments and fragments 159: -m [ --makesegments ] write out a skeleton segments file 159: -f [ --file ] arg state file 159: -i [ --first-frame ] arg (=0) start from this frame 159: -b [ --begin ] arg (=0) start time in simulation 159: -n [ --nframes ] arg (=1) number of frames to process 159: 142/249 Test #159: integration_xtp_mapHelp ............................ Passed 0.25 sec 161: ================================================== 161: ======== VOTCA (http://www.votca.org) ======== 161: ================================================== 161: 161: please submit bugs to https://github.com/votca/votca/issues 161: 161: xtp_tools, version 2024 (compiled Feb 29 2024, 03:52:32) 161: 161: Runs excitation/charge transport tools 161: 161: 161: 161: Allowed options: 161: -h [ --help ] display this help and exit 161: --verbose be loud and noisy 161: --verbose1 be very loud and noisy 161: -v [ --verbose2 ] be extremly loud and noisy 161: -o [ --options ] arg Tool user options. 161: -t [ --nthreads ] arg (=1) number of threads to create 161: -e [ --execute ] arg Name of Tool to run 161: -l [ --list ] Lists all available Tools 161: -d [ --description ] arg Short description of a Tools 161: -c [ --cmdoptions ] arg Modify options via command line by e.g. '-c 161: xmltag.subtag=value'. Use whitespace to separate 161: multiple options 161: -p [ --printoptions ] arg Prints xml options of a Tool 161: 143/249 Test #161: integration_xtp_toolsHelp .......................... Passed 0.25 sec 162: ================================================== 162: ======== VOTCA (http://www.votca.org) ======== 162: ================================================== 162: 162: please submit bugs to https://github.com/votca/votca/issues 162: 162: xtp_parallel, version 2024 (compiled Feb 29 2024, 03:52:32) 162: 162: Runs job-based heavy-duty calculators 162: 162: 162: 162: Allowed options: 162: -h [ --help ] display this help and exit 162: --verbose be loud and noisy 162: --verbose1 be very loud and noisy 162: -v [ --verbose2 ] be extremly loud and noisy 162: -o [ --options ] arg Calculator user options. 162: -t [ --nthreads ] arg (=1) number of threads to create 162: -e [ --execute ] arg Name of Calculator to run 162: -l [ --list ] Lists all available Calculators 162: -d [ --description ] arg Short description of a Calculators 162: -c [ --cmdoptions ] arg Modify options via command line by e.g. '-c 162: xmltag.subtag=value'. Use whitespace to 162: separate multiple options 162: -p [ --printoptions ] arg Prints xml options of a Calculator 162: -f [ --file ] arg hdf5 state file, *.hdf5 162: -i [ --first-frame ] arg (=0) start from this frame 162: -n [ --nframes ] arg (=1) number of frames to process 162: -s [ --save ] arg (=1) whether or not to save changes to state file 162: -x [ --ompthreads ] arg (=1) number of openmp threads to create in each 162: thread 162: -r [ --restart ] arg restart pattern: 'host(pc1:234) 162: stat(FAILED)' 162: -q [ --cache ] arg (=8) assigns jobs in blocks of this size 162: -j [ --jobs ] arg (=run) task(s) to perform: write, run, read 162: -m [ --maxjobs ] arg (=-1) maximum number of jobs to process (-1 = inf) 162: 144/249 Test #162: integration_xtp_parallelHelp ....................... Passed 0.25 sec 163: Running 1 test case... 163: 163: *** No errors detected 163:  145/249 Test #163: unit_test_adiis .................................... Passed 0.25 sec 167: Running 2 test cases... 167: 167: *** No errors detected 167:  169: Running 3 test cases... 169: 169: *** No errors detected 169:  170: Running 2 test cases... 170: 170: *** No errors detected 170:  166: Running 2 test cases... 166: 166: *** No errors detected 166:  110: :-) GROMACS - gmx mdrun, 2024.1-Debian_2024.1_1+b1 (double precision) (-: 110: 110: Executable: /usr/bin/gmx_d 110: Data prefix: /usr 110: Working dir: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 110: Command line: 110: gmx_d mdrun 110: 110: Compiled SIMD is SSE4.1, but AVX2_256 might be faster (see log). 110: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 110: 110: NOTE: Parallelization is limited by the small number of atoms, 110: only starting 1 thread-MPI ranks. 110: You can use the -nt and/or -ntmpi option to optimize the number of threads. 110: 110: Using 1 MPI thread 110: Using 16 OpenMP threads 110: 104: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 106: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 108: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 171: Running 5 test cases... 171: 171: *** No errors detected 171:  172: Running 3 test cases... 172: 172: *** No errors detected 173: Running 1 test case... 173: 173: *** No errors detected 173:  174: Running 1 test case... 174: 174: *** No errors detected 174:  175: Running 3 test cases... 175: 7 175: 12 175: 14 175: 175: *** No errors detected 175:  179: Running 1 test case... 179: 179: *** No errors detected 179:  181: Running 3 test cases... 181: 181: *** No errors detected 181:  184: Running 1 test case... 184: 184: *** No errors detected 184:  146/249 Test #166: unit_test_aomatrix3d ............................... Passed 0.24 sec 147/249 Test #167: unit_test_aotransform .............................. Passed 0.24 sec 148/249 Test #169: unit_test_atom ..................................... Passed 0.23 sec 149/249 Test #170: unit_test_qmatom ................................... Passed 0.23 sec 150/249 Test #104: integration_Run_csg_dump_gmx_tpr ................... Passed 0.21 sec 151/249 Test #106: integration_Run_csg_dump_gmx_tpr_excl .............. Passed 0.21 sec 152/249 Test #108: integration_Run_csg_dump_gmx_tpr_cg ................ Passed 0.20 sec 153/249 Test #171: unit_test_polarsegment ............................. Passed 0.20 sec 154/249 Test #173: unit_test_basisset ................................. Passed 0.19 sec 155/249 Test #174: unit_test_bseoperator_btda ......................... Passed 0.19 sec 156/249 Test #175: unit_test_bfgs_trm ................................. Passed 0.18 sec 157/249 Test #179: unit_test_diis ..................................... Passed 0.16 sec 158/249 Test #181: unit_test_eigen .................................... Passed 0.15 sec 159/249 Test #184: unit_test_glink .................................... Passed 0.15 sec test 105 Start 105: integration_Compare_csg_dump_gmx_tpr_output 105: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_tpr.out" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/csg_dump_tpr.out" 105: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 105: Test timeout computed to be: 1500 test 107 Start 107: integration_Compare_csg_dump_gmx_tpr_excl_output 107: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_tpr_excl.out" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/csg_dump_tpr_excl.out" 107: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 107: Test timeout computed to be: 1500 test 109 Start 109: integration_Compare_csg_dump_gmx_tpr_cg_output 109: Test command: /usr/bin/cmake "-E" "compare_files" "csg_dump_tpr_cg.out" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/csg_dump_tpr_cg.out" 109: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 109: Test timeout computed to be: 1500 test 193 Start 193: unit_test_staticsite 193: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_staticsite 193: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_staticsite 193: Test timeout computed to be: 1500 test 194 Start 194: unit_test_ppm 194: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_ppm 194: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_ppm 194: Test timeout computed to be: 1500 test 195 Start 195: unit_test_qmnblist 195: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmnblist 195: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmnblist 195: Test timeout computed to be: 1500 test 196 Start 196: unit_test_qmpair 196: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmpair 196: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmpair 196: Test timeout computed to be: 1500 test 197 Start 197: unit_test_qmstate 197: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmstate 197: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmstate 197: Test timeout computed to be: 1500 test 198 Start 198: unit_test_radial_euler_maclaurin_rule 198: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_radial_euler_maclaurin_rule 198: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_radial_euler_maclaurin_rule 198: Test timeout computed to be: 1500 test 199 Start 199: unit_test_rpa 199: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_rpa 199: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_rpa 199: Test timeout computed to be: 1500 test 200 Start 200: unit_test_rpa_h2p 200: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_rpa_h2p 200: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_rpa_h2p 200: Test timeout computed to be: 1500 test 201 Start 201: unit_test_segment 201: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_segment 201: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_segment 201: Test timeout computed to be: 1500 test 202 Start 202: unit_test_aoshell 202: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_aoshell 202: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_aoshell 202: Test timeout computed to be: 1500 test 203 Start 203: unit_test_sphere_lebedev_rule 203: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_sphere_lebedev_rule 203: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_sphere_lebedev_rule 203: Test timeout computed to be: 1500 test 204 Start 204: unit_test_statetracker 204: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_statetracker 204: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_statetracker 204: Test timeout computed to be: 1500 test 205 Start 205: unit_test_symmetric_matrix 205: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_symmetric_matrix 205: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_symmetric_matrix 205: Test timeout computed to be: 1500 test 206 Start 206: unit_test_threecenter_dft 206: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_threecenter_dft 206: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_threecenter_dft 206: Test timeout computed to be: 1500 test 207 Start 207: unit_test_threecenter_gwbse 207: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_threecenter_gwbse 207: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_threecenter_gwbse 207: Test timeout computed to be: 1500 test 208 Start 208: unit_test_topology 208: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_topology 208: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_topology 208: Test timeout computed to be: 1500 172:  192: Running 5 test cases... 192: 192: *** No errors detected 192:  165: Running 3 test cases... 165: 165: *** No errors detected 165:  178: Running 1 test case... 178: 178: *** No errors detected 178:  185: Running 7 test cases... 185: 185: *** No errors detected 185:  190: Running 2 test cases... 190: 190: *** No errors detected 190:  193: Running 6 test cases... 193: 193: *** No errors detected 193:  195: Running 2 test cases... 195: 195: *** No errors detected 195:  160/249 Test #165: unit_test_aomatrix ................................. Passed 0.45 sec 161/249 Test #172: unit_test_qmmolecule ............................... Passed 0.40 sec 162/249 Test #178: unit_test_dftcoupling .............................. Passed 0.37 sec 163/249 Test #185: unit_test_hdf5 ..................................... Passed 0.36 sec 164/249 Test #190: unit_test_regular_grid ............................. Passed 0.33 sec 165/249 Test #192: unit_test_polarsite ................................ Passed 0.22 sec 166/249 Test #105: integration_Compare_csg_dump_gmx_tpr_output ........ Passed 0.21 sec 167/249 Test #107: integration_Compare_csg_dump_gmx_tpr_excl_output ... Passed 0.20 sec 168/249 Test #109: integration_Compare_csg_dump_gmx_tpr_cg_output ..... Passed 0.18 sec 169/249 Test #193: unit_test_staticsite ............................... Passed 0.17 sec 170/249 Test #195: unit_test_qmnblist ................................. Passed 0.15 sec test 209 Start 209: unit_test_sigma_exact 209: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_sigma_exact 209: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_sigma_exact 209: Test timeout computed to be: 1500 test 210 Start 210: unit_test_sigma_ppm 210: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_sigma_ppm 210: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_sigma_ppm 210: Test timeout computed to be: 1500 test 211 Start 211: unit_test_sigma_cda 211: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_sigma_cda 211: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_sigma_cda 211: Test timeout computed to be: 1500 test 212 Start 212: unit_test_gw 212: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_gw 212: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_gw 212: Test timeout computed to be: 1500 test 213 Start 213: unit_test_bse_operator 213: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bse_operator 213: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bse_operator 213: Test timeout computed to be: 1500 test 214 Start 214: unit_test_davidson 214: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_davidson 214: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_davidson 214: Test timeout computed to be: 1500 test 215 Start 215: unit_test_trustregion 215: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_trustregion 215: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_trustregion 215: Test timeout computed to be: 1500 test 216 Start 216: unit_test_gnode 216: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_gnode 216: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_gnode 216: Test timeout computed to be: 1500 test 217 Start 217: unit_test_vc2index 217: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_vc2index 217: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_vc2index 217: Test timeout computed to be: 1500 test 218 Start 218: unit_test_grid 218: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_grid 218: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_grid 218: Test timeout computed to be: 1500 test 219 Start 219: unit_test_segmentmapper 219: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_segmentmapper 219: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_segmentmapper 219: Test timeout computed to be: 1500 197: Running 2 test cases... 197: 197: *** No errors detected 197:  196: Running 1 test case... 196: 196: *** No errors detected 196:  186: Running 1 test case... 186: 186: *** No errors detected 186:  198: Running 1 test case... 198: 198: *** No errors detected 164: Running 3 test cases... 164: 164: *** No errors detected 201: Running 2 test cases... 201: 201: *** No errors detected 201:  177: Running 1 test case... 177: result mos 177: 0.996559 0.223082 -1.78969e-15 -4.95242e-15 -2.02391e-15 1.17866e-16 -1.65232e-16 -3.72532e-16 -0.0301914 -6.32849e-16 -3.89012e-16 5.80048e-17 0.102052 -1.34372e-14 -8.16187e-16 2.76341e-15 -0.111923 177: 0.0445146 -0.88316 4.1165e-15 2.02043e-14 1.22432e-14 -7.04238e-15 -5.7801e-15 1.15186e-15 0.866126 -1.52656e-15 -3.00107e-15 -2.66193e-15 0.938329 -1.55542e-13 -1.0221e-14 3.16691e-14 -1.28767 177: -8.67362e-17 5.56499e-15 0.37446 -0.330561 0.926584 -0.363588 -0.217484 0.166917 -2.86576e-15 -0.164008 0.377596 -0.0662099 -2.09555e-15 0.136742 0.0662301 -0.0449835 -1.8964e-14 177: -3.01408e-17 -2.28463e-15 -0.968034 0.0528839 0.410077 -0.131148 -0.105487 -0.423119 9.92262e-16 -0.13306 0.0114675 0.395 -1.5786e-15 0.0248372 0.0495455 0.148448 1.2039e-15 177: -1.65016e-16 2.70756e-14 0.175328 0.997989 0.28518 -0.240751 0.385914 -0.0215904 1.61329e-15 -0.359525 -0.176496 -0.115986 -2.56739e-16 -0.0761121 0.135156 -0.0323748 8.78811e-15 177: -0.0472716 -0.235837 6.50174e-15 4.13558e-15 -4.76008e-15 7.5313e-15 8.6875e-15 4.19109e-15 -0.599523 6.82787e-15 9.36751e-15 2.94209e-15 -1.8333 5.25635e-13 2.80886e-14 -1.06692e-13 4.24316 177: 3.20924e-16 -1.80411e-15 -0.0583844 0.0515398 -0.14447 0.306245 0.183184 -0.140591 9.99201e-16 0.727736 -1.67547 0.293787 6.75848e-15 -0.879016 -0.425745 0.289166 1.23734e-13 177: 1.78677e-16 -5.27356e-16 0.150932 -0.00824546 -0.0639377 0.110464 0.0888506 0.356387 -1.06304e-14 0.590413 -0.0508834 -1.7527 3.6221e-15 -0.15966 -0.318492 -0.954262 -3.02536e-15 177: 5.74193e-16 -7.16094e-15 -0.0273365 -0.155603 -0.0444642 0.202781 -0.32505 0.0181852 -1.2268e-14 1.59528 0.783148 0.514651 2.13718e-15 0.489269 -0.868821 0.208114 -5.45397e-14 177: 0.00106227 -0.0237672 -0.00117273 0.0020197 0.00454752 0.686779 -0.0587743 0.259396 -0.343823 -0.481503 0.155884 0.156057 0.600309 -0.232789 -0.683467 -0.193627 0.0554949 177: 0.00928842 0.0414346 -0.0210154 0.0361931 0.0814917 -0.00261598 0.000223875 -0.000988053 -0.0301047 -0.811432 0.262697 0.262989 -0.0095153 0.657754 1.93116 0.547103 -1.24406 177: 0.00106227 -0.0237672 -0.00425586 -0.00172314 -0.00224787 -0.441854 0.255777 0.5308 -0.343823 0.286348 -0.139065 0.423278 0.600309 0.0974898 0.413571 -0.615031 0.0554949 177: 0.00928842 0.0414346 -0.0762651 -0.0308786 -0.0402819 0.00168305 -0.00097427 -0.00202185 -0.0301047 0.482555 -0.234353 0.713312 -0.0095153 -0.275462 -1.16856 1.7378 -1.24406 177: 0.00106227 -0.0237672 0.00215594 0.00357687 -0.00294828 -0.237165 -0.66194 -0.219075 -0.343823 -0.0458021 -0.414745 -0.32617 0.600309 0.647404 -0.0527871 0.369987 0.0554949 177: 0.00928842 0.0414346 0.0386346 0.0640976 -0.0528332 0.000903374 0.00252137 0.000834468 -0.0301047 -0.077186 -0.698932 -0.549664 -0.0095153 -1.82927 0.149152 -1.04541 -1.24406 177: 0.00106227 -0.0237672 0.00327265 -0.00387344 0.000648625 -0.00775959 0.464937 -0.571121 -0.343823 0.240957 0.397926 -0.253165 0.600309 -0.512105 0.322683 0.438672 0.0554949 177: 0.00928842 0.0414346 0.0586459 -0.0694121 0.0116234 2.95567e-05 -0.00177097 0.00217543 -0.0301047 0.406063 0.670589 -0.426636 -0.0095153 1.44697 -0.911754 -1.23949 -1.24406 177: ref mos 177: -0.996559 -0.223082 4.81443e-15 2.21045e-15 -6.16146e-17 -3.16966e-16 5.46703e-18 -1.09681e-15 -0.0301914 6.45993e-16 1.05377e-16 3.41154e-16 -0.102052 -5.79826e-16 9.38593e-16 -4.69346e-15 -0.111923 177: -0.0445146 0.88316 -1.94941e-14 -8.67388e-15 -7.26679e-16 1.16326e-14 -3.35886e-15 2.37877e-14 0.866126 3.2068e-15 3.80914e-15 3.24563e-15 -0.938329 -6.4404e-15 1.10811e-14 -5.5056e-14 -1.28767 177: 8.15798e-17 2.30849e-14 1.04169 0.117804 0.0951759 0.179467 0.147031 0.39183 -1.02927e-14 0.32699 -0.223689 -0.130009 1.0375e-15 -0.0940179 0.126956 0.0122904 1.41709e-15 177: 4.60157e-17 -7.1203e-15 0.143338 -0.980459 -0.355251 0.41611 -0.10826 -0.149964 2.41546e-16 0.12214 -0.0512447 0.39537 1.1054e-15 -0.0996828 -0.0636092 -0.105478 5.10746e-15 177: -5.25872e-18 4.8424e-15 0.0488925 0.364515 -0.9863 0.0447336 0.417155 -0.177023 5.76117e-15 -0.228081 -0.348136 0.0253377 -1.05286e-15 0.079576 0.0703157 -0.117608 5.31327e-15 177: 0.0472716 0.235837 -3.58018e-15 -1.68354e-15 2.3989e-15 -9.86879e-15 4.52519e-15 -1.6106e-14 -0.599523 -1.31237e-14 -8.63443e-15 -8.61196e-15 1.8333 2.05275e-14 -3.9562e-14 1.89874e-13 4.24316 177: -2.74184e-16 -1.53939e-15 -0.162416 -0.0183675 -0.0148395 -0.151162 -0.123842 -0.330032 1.10084e-15 -1.45092 0.992556 0.576875 -3.82954e-15 0.604373 -0.816111 -0.0790061 -8.89474e-15 177: -2.24862e-16 3.23655e-15 -0.0223487 0.152869 0.0553894 -0.350483 0.0911859 0.126313 -5.48468e-15 -0.541961 0.227383 -1.75434 -3.89443e-15 0.640788 0.408897 0.67804 -3.17156e-14 177: -2.81346e-17 -1.09423e-15 -0.00762313 -0.0568338 0.15378 -0.0376785 -0.351364 0.149104 -4.94425e-15 1.01204 1.54475 -0.112429 8.50653e-15 -0.511536 -0.452008 0.756019 -3.3547e-14 177: -0.00106227 0.0237672 0.00345981 -0.00139675 -0.00349474 -0.597906 -0.425733 -0.0605479 -0.343823 0.162103 -0.45692 0.21318 -0.600309 0.310843 -0.36406 0.574148 0.0554949 177: -0.00928842 -0.0414346 0.0619999 -0.0250297 -0.0626259 0.00227746 0.00162164 0.00023063 -0.0301047 0.273177 -0.770004 0.359253 0.0095153 -0.8783 1.02867 -1.62228 -1.24406 177: -0.00106227 0.0237672 0.00238182 0.00205737 0.00402848 0.262742 0.151145 -0.671213 -0.343823 0.317484 0.12884 -0.40386 -0.600309 0.201313 -0.327527 -0.641099 0.0554949 177: -0.00928842 -0.0414346 0.0426822 0.0368682 0.0721904 -0.0010008 -0.000575719 0.00255669 -0.0301047 0.535026 0.217123 -0.680588 0.0095153 -0.568818 0.925441 1.81145 -1.24406 177: -0.00106227 0.0237672 -0.00318563 0.0034409 -0.00203628 0.514364 -0.353326 0.391148 -0.343823 -0.496623 -0.0536813 -0.176018 -0.600309 -0.744328 -0.01898 0.0665156 0.0554949 177: -0.00928842 -0.0414346 -0.0570866 0.0616609 -0.0364902 -0.00195924 0.00134584 -0.0014899 -0.0301047 -0.836913 -0.0904642 -0.296627 0.0095153 2.10313 0.0536287 -0.187943 -1.24406 177: -0.00106227 0.0237672 -0.002656 -0.00410152 0.00150255 -0.1792 0.627913 0.340613 -0.343823 0.0170366 0.38176 0.366698 -0.600309 0.232172 0.710567 0.000435528 0.0554949 177: -0.00928842 -0.0414346 -0.0475955 -0.0734994 0.0269257 0.000682583 -0.00239176 -0.00129742 -0.0301047 0.0287103 0.643346 0.617962 0.0095153 -0.656011 -2.00774 -0.0012306 -1.24406 177: norms 177: 1 177: 1 177: 0.954951 177: 0.996401 177: 0.993462 177: proj 177: -1 2.64945e-08 2.60209e-17 -2.08167e-17 -9.04225e-17 177: 8.38315e-08 -1 2.16008e-14 1.8735e-14 2.89872e-14 177: -1.07499e-16 2.77259e-14 0.204235 -0.25123 0.925063 177: 1.70762e-18 2.08917e-14 0.917 0.256954 -0.184787 177: 2.19073e-10 -2.30681e-09 0.171264 -0.929341 -0.311578 177: 177: *** No errors detected 202: Running 1 test case... 202: 202: *** No errors detected 202:  217: Running 1 test case... 217: 217: *** No errors detected 217:  171/249 Test #186: unit_test_cubefile_writer .......................... Passed 0.46 sec 172/249 Test #196: unit_test_qmpair ................................... Passed 0.24 sec 173/249 Test #197: unit_test_qmstate .................................. Passed 0.23 sec 174/249 Test #201: unit_test_segment .................................. Passed 0.20 sec 175/249 Test #202: unit_test_aoshell .................................. Passed 0.19 sec 176/249 Test #217: unit_test_vc2index ................................. Passed 0.04 sec test 220 Start 220: unit_test_eeinteractor 220: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_eeinteractor 220: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_eeinteractor 220: Test timeout computed to be: 1500 test 221 Start 221: unit_test_hist 221: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_hist 221: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_hist 221: Test timeout computed to be: 1500 test 222 Start 222: unit_test_qmfragment 222: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_qmfragment 222: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_qmfragment 222: Test timeout computed to be: 1500 test 223 Start 223: unit_test_jobtopology 223: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_jobtopology 223: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_jobtopology 223: Test timeout computed to be: 1500 test 224 Start 224: unit_test_dipoledipoleinteraction 224: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_dipoledipoleinteraction 224: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_dipoledipoleinteraction 224: Test timeout computed to be: 1500 test 225 Start 225: unit_test_populationanalysis 225: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_populationanalysis 225: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_populationanalysis 225: Test timeout computed to be: 1500 198:  164:  177/249 Test #164: unit_test_aobasis .................................. Passed 0.68 sec 177:  219: Running 3 test cases... 219: 219: *** No errors detected 219:  208: Running 3 test cases... 208: 208: *** No errors detected 208:  205: Running 6 test cases... 205: 205: *** No errors detected 222: Running 2 test cases... 222: 222: *** No errors detected 222:  223: Running 1 test case... 223: 223: *** No errors detected 223:  178/249 Test #177: unit_test_convergenceacc ........................... Passed 0.61 sec 179/249 Test #198: unit_test_radial_euler_maclaurin_rule .............. Passed 0.34 sec 180/249 Test #208: unit_test_topology ................................. Passed 0.23 sec 181/249 Test #219: unit_test_segmentmapper ............................ Passed 0.13 sec 182/249 Test #222: unit_test_qmfragment ............................... Passed 0.08 sec 183/249 Test #223: unit_test_jobtopology .............................. Passed 0.07 sec test 226 Start 226: unit_test_orca 226: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_orca 226: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_orca 226: Test timeout computed to be: 1500 test 227 Start 227: unit_test_dftengine 227: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_dftengine 227: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_dftengine 227: Test timeout computed to be: 1500 test 228 Start 228: unit_test_bsecoupling 228: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_bsecoupling 228: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_bsecoupling 228: Test timeout computed to be: 1500 test 229 Start 229: unit_test_rate_engine 229: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_rate_engine 229: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_rate_engine 229: Test timeout computed to be: 1500 test 230 Start 230: unit_test_DeltaQ_filter 230: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_DeltaQ_filter 230: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_DeltaQ_filter 230: Test timeout computed to be: 1500 test 231 Start 231: unit_test_oscillatorstrength_filter 231: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_oscillatorstrength_filter 231: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_oscillatorstrength_filter 231: Test timeout computed to be: 1500 test 232 Start 232: unit_test_localisation_filter 232: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_localisation_filter 232: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_localisation_filter 232: Test timeout computed to be: 1500 205:  156: . [100%] 156: 1 passed in 0.24s 221: Running 1 test case... 221: 221: *** No errors detected 221:  184/249 Test #205: unit_test_symmetric_matrix ......................... Passed 0.36 sec 185/249 Test #221: unit_test_hist ..................................... Passed 0.16 sec test 233 Start 233: unit_test_density_filter 233: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_density_filter 233: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_density_filter 233: Test timeout computed to be: 1500 test 234 Start 234: unit_test_overlap_filter 234: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_overlap_filter 234: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_overlap_filter 234: Test timeout computed to be: 1500 215: Running 1 test case... 215: 215: *** No errors detected 215:  191: Running 5 test cases... 191: 191: *** No errors detected 203: Running 4 test cases... 203: 203: *** No errors detected 226: Running 5 test cases... 226: orca 226: xtp 229: Running 2 test cases... 229: 229: *** No errors detected 186/249 Test #215: unit_test_trustregion .............................. Passed 0.32 sec test 235 Start 235: unit_test_newton_rapson 235: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_newton_rapson 235: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_newton_rapson 235: Test timeout computed to be: 1500 191:  187/249 Test #191: unit_test_orbitals ................................. Passed 0.63 sec 203:  229:  188/249 Test #229: unit_test_rate_engine .............................. Passed 0.16 sec 189/249 Test #203: unit_test_sphere_lebedev_rule ...................... Passed 0.48 sec test 236 Start 236: unit_test_indexparser 236: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_indexparser 236: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_indexparser 236: Test timeout computed to be: 1500 test 237 Start 237: unit_test_orbreorder 237: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_orbreorder 237: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_orbreorder 237: Test timeout computed to be: 1500 test 238 Start 238: unit_test_molden 238: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_molden 238: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_molden 238: Test timeout computed to be: 1500 235: Running 1 test case... 235: 235: *** No errors detected 235:  61: This should be a number: -0.0413191 61: This should be a number: -0.854333 61: 61: Block No1 done! 61: Updating file: CG-CG.force 61: Updating files: CG-CG-CG.pot and: CG-CG-CG.force 61: 61: We are done, thank you very much! 226: 226: *** No errors detected 220: Running 9 test cases... 220: 220: *** No errors detected 218: Running 1 test case... 218: 218: *** No errors detected 218:  236: Running 3 test cases... 236: 236: *** No errors detected 190/249 Test #61: integration_Run_csg_fmatch_3body ................... Passed 1.24 sec 191/249 Test #218: unit_test_grid ..................................... Passed 0.37 sec 192/249 Test #235: unit_test_newton_rapson ............................ Passed 0.08 sec test 62 Start 62: integration_Compare_csg_fmatch_3body_output1 62: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG.force" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.force.fmatch_3body" 62: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body 62: Test timeout computed to be: 1500 test 63 Start 63: integration_Compare_csg_fmatch_3body_output2 63: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.force" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG-CG.force.fmatch_3body" 63: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body 63: Test timeout computed to be: 1500 test 64 Start 64: integration_Compare_csg_fmatch_3body_output3 64: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "CG-CG-CG.pot" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG-CG.pot.fmatch_3body" 64: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_csg_fmatch_3body 64: Test timeout computed to be: 1500 226:  220:  236:  193/249 Test #220: unit_test_eeinteractor ............................. Passed 0.41 sec 194/249 Test #226: unit_test_orca ..................................... Passed 0.30 sec 195/249 Test #236: unit_test_indexparser .............................. Passed 0.12 sec test 239 Start 239: unit_test_gaussianwriter 239: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_gaussianwriter 239: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_gaussianwriter 239: Test timeout computed to be: 1500 test 240 Start 240: unit_test_incrementalfockbuilder 240: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_incrementalfockbuilder 240: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_incrementalfockbuilder 240: Test timeout computed to be: 1500 test 241 Start 241: unit_test_parallelism 241: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_parallelism 241: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_parallelism 241: Test timeout computed to be: 1500 216: Running 2 test cases... 216: 216: *** No errors detected 240: Running 2 test cases... 240: 240: *** No errors detected 240:  196/249 Test #240: unit_test_incrementalfockbuilder ................... Passed 0.03 sec test 242 Start 242: unit_test_anderson 242: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_anderson 242: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_anderson 242: Test timeout computed to be: 1500 230: Running 1 test case... 230: 230: *** No errors detected 232: Running 1 test case... 232: 232: *** No errors detected 64: Comparing CG-CG-CG.pot and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG-CG.pot.fmatch_3body to a tolerance of 5e-05 216:  197/249 Test #216: unit_test_gnode .................................... Passed 0.51 sec test 243 Start 243: unit_test_gaussian_quadratures 243: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_gaussian_quadratures 243: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_gaussian_quadratures 243: Test timeout computed to be: 1500 198/249 Test #64: integration_Compare_csg_fmatch_3body_output3 ....... Passed 0.07 sec test 244 Start 244: unit_test_pmlocalization 244: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_pmlocalization 244: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_pmlocalization 244: Test timeout computed to be: 1500 62: Comparing CG-CG.force and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG.force.fmatch_3body to a tolerance of 5e-05 241: Running 1 test case... 241: 241: *** No errors detected 241:  206: Running 1 test case... 206: 206: *** No errors detected 199/249 Test #62: integration_Compare_csg_fmatch_3body_output1 ....... Passed 0.13 sec 200/249 Test #241: unit_test_parallelism .............................. Passed 0.05 sec test 245 Start 245: unit_test_activedensitymatrix 245: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_activedensitymatrix 245: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_activedensitymatrix 245: Test timeout computed to be: 1500 test 246 Start 246: unit_test_activedftengine 246: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_activedftengine 246: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_activedftengine 246: Test timeout computed to be: 1500 232:  63: Comparing CG-CG-CG.force and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/CG-CG-CG.force.fmatch_3body to a tolerance of 5e-05 153: histogram created using 4560 data-rows, written to file_interactions.txt 201/249 Test #232: unit_test_localisation_filter ...................... Passed 0.33 sec test 247 Start 247: unit_test_truncdftengine 247: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_truncdftengine 247: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_truncdftengine 247: Test timeout computed to be: 1500 204: Running 2 test cases... 204: 204: *** No errors detected 231: Running 1 test case... 231: 231: *** No errors detected 202/249 Test #63: integration_Compare_csg_fmatch_3body_output2 ....... Passed 0.13 sec test 248 Start 248: unit_test_diabatization 248: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_diabatization 248: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_diabatization 248: Test timeout computed to be: 1500 206:  203/249 Test #206: unit_test_threecenter_dft .......................... Passed 0.67 sec test 249 Start 249: unit_test_transition_densities 249: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/unit_test_transition_densities 249: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/xtp/src/tests/Run_unit_test_transition_densities 249: Test timeout computed to be: 1500 204/249 Test #156: unit_check_csg_xml.py .............................. Passed 1.12 sec 204:  205/249 Test #204: unit_test_statetracker ............................. Passed 0.73 sec 242: Running 1 test case... 242: 242: *** No errors detected 230:  206/249 Test #230: unit_test_DeltaQ_filter ............................ Passed 0.42 sec 231:  207/249 Test #231: unit_test_oscillatorstrength_filter ................ Passed 0.41 sec 110: starting mdrun 'Flex water' 110: 1 steps, 0.0 ps. 242:  239: Running 1 test case... 239: 239: *** No errors detected 239:  208/249 Test #239: unit_test_gaussianwriter ........................... Passed 0.22 sec 209/249 Test #242: unit_test_anderson ................................. Passed 0.17 sec 233: Running 1 test case... 233: 233: *** No errors detected 249: Running 1 test case... 249: 243: Running 4 test cases... 243: 243: *** No errors detected 225: Running 2 test cases... 225: 225: *** No errors detected 233:  210/249 Test #233: unit_test_density_filter ........................... Passed 0.58 sec 245: Running 1 test case... 245: 245: *** No errors detected 243:  211/249 Test #243: unit_test_gaussian_quadratures ..................... Passed 0.33 sec 225:  245:  212/249 Test #225: unit_test_populationanalysis ....................... Passed 0.72 sec 213/249 Test #245: unit_test_activedensitymatrix ...................... Passed 0.33 sec 199: Running 2 test cases... 199: 199: *** No errors detected 200: Running 1 test case... 200: 200: *** No errors detected 199:  214/249 Test #199: unit_test_rpa ...................................... Passed 1.08 sec 207: Running 1 test case... 207: 207: *** No errors detected 189: Running 1 test case... 189: 189: *** No errors detected 200:  215/249 Test #200: unit_test_rpa_h2p .................................. Passed 1.11 sec 237: Running 1 test case... 237: 237: *** No errors detected 189:  237:  207:  216/249 Test #207: unit_test_threecenter_gwbse ........................ Passed 1.05 sec 217/249 Test #237: unit_test_orbreorder ............................... Passed 0.62 sec 218/249 Test #189: unit_test_vxc_grid ................................. Passed 1.37 sec 182: Running 2 test cases... 182: 182: *** No errors detected 182:  219/249 Test #182: unit_test_eris ..................................... Passed 1.50 sec 224: Running 1 test case... 224: 224: *** No errors detected 209: Running 1 test case... 209: 209: *** No errors detected 224:  220/249 Test #224: unit_test_dipoledipoleinteraction .................. Passed 1.01 sec 209:  221/249 Test #209: unit_test_sigma_exact .............................. Passed 1.20 sec 248: Running 3 test cases... 248: 248: ... ... 2025-6-8 10:4:58 Data was created with basis set def2-svp 194: Running 1 test case... 194: 194: *** No errors detected 188: Running 1 test case... 188: 188: *** No errors detected 194:  222/249 Test #194: unit_test_ppm ...................................... Passed 1.60 sec 249: ... ... 2025-6-8 10:4:58 Data was created with basis set def2-svp 249: *** No errors detected 249:  223/249 Test #249: unit_test_transition_densities ..................... Passed 0.82 sec 188:  224/249 Test #188: unit_test_vxc_potential ............................ Passed 1.81 sec 210: Running 1 test case... 210: 210: *** No errors detected 210:  225/249 Test #210: unit_test_sigma_ppm ................................ Passed 1.54 sec 155: ..... [100%] 155: 5 passed in 0.92s 228: Running 1 test case... 228: 228: *** No errors detected 228:  226/249 Test #228: unit_test_bsecoupling .............................. Passed 1.51 sec 180: Running 1 test case... 180: 180: *** No errors detected 213: Running 1 test case... 213: 213: *** No errors detected 214: Running 7 test cases... 214: 214: ERROR 2025-6-8 10:4:58 Davidson Solver using 42 threads. 214: ERROR 2025-6-8 10:4:58 Tolerance : 0.0001 214: ERROR 2025-6-8 10:4:58 DPR Correction 214: ERROR 2025-6-8 10:4:58 Matrix size : 400x400 214: ERROR 2025-6-8 10:4:58 iter Search Space Norm 214: ERROR 2025-6-8 10:4:58 0 20 1.63e-04 50.00% converged 214: ERROR 2025-6-8 10:4:58 1 30 1.68e-09 100.00% converged 214: ERROR 2025-6-8 10:4:58 Davidson converged after 1 iterations. 214: ERROR 2025-6-8 10:4:58----------------------------------- 214: ERROR 2025-6-8 10:4:58- Davidson ran for 0.228199secs. 214: ERROR 2025-6-8 10:4:58----------------------------------- 213:  180:  227/249 Test #180: unit_test_ecpaobasis ............................... Passed 2.15 sec 228/249 Test #213: unit_test_bse_operator ............................. Passed 1.74 sec 229/249 Test #155: unit_iie.py ........................................ Passed 2.28 sec 234: Running 1 test case... 234: 234: *** No errors detected 234:  230/249 Test #234: unit_test_overlap_filter ........................... Passed 1.64 sec 110: 110: Writing final coordinates. 238: Running 2 test cases... 238: 238: *** No errors detected 238:  231/249 Test #238: unit_test_molden ................................... Passed 1.71 sec 110: 110: NOTE: 32 % of the run time was spent in pair search, 110: you might want to increase nstlist (this has no effect on accuracy) 110: 110: Core t (s) Wall t (s) (%) 110: Time: 23.132 1.446 1599.9 110: (ns/day) (hour/ns) 110: Performance: 0.239 100.406 110: 110: GROMACS reminds you: "Everybody Wants to Be Naked and Famous" (Tricky) 110: 232/249 Test #110: integration_Run_gmx_mdrun .......................... Passed 2.62 sec test 111 Start 111: integration_Run_csg_map_gmx 111: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_map "--top" "topol.tpr" "--trj" "traj.trr" "--out" "traj.gro" "--no-map" "--nframes" "1" 111: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 111: Test timeout computed to be: 1500 test 113 Start 113: integration_Run_csg_map_gmx_xtc 113: Test command: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/csg_map "--top" "topol.tpr" "--trj" "traj_comp.xtc" "--out" "traj_comp.gro" "--no-map" "--nframes" "1" 113: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 113: Test timeout computed to be: 1500 113: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 113: I have 9 beads in 3 molecules 113: Reading frame 0 time 0.000 113: writing coarse-grained trajectory to traj_comp.gro 233/249 Test #113: integration_Run_csg_map_gmx_xtc .................... Passed 0.04 sec test 114 Start 114: integration_Compare_csg_map_gmx_xtc_output 114: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "traj_comp.gro" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/conf.gro" 114: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 114: Test timeout computed to be: 1500 111: Reading file topol.tpr, VERSION 2024.1-Debian_2024.1_1+b1 (double precision) 111: I have 9 beads in 3 molecules 111: trr version: GMX_trn_file (double precision) 111: Reading frame 0 time 0.000 111: writing coarse-grained trajectory to traj.gro 234/249 Test #111: integration_Run_csg_map_gmx ........................ Passed 0.11 sec test 112 Start 112: integration_Compare_csg_map_gmx_output 112: Test command: /build/reproducible-path/votca-2024/tools/scripts/votca_compare "--etol" "5e-5" "-f1" "traj.gro" "-f2" "/build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/conf.gro" 112: Working Directory: /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/csg/src/tools/Run_gmx_3mols 112: Test timeout computed to be: 1500 212: Running 2 test cases... 212: 212: *** No errors detected 212:  112: Comparing traj.gro and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/conf.gro to a tolerance of 5e-05 114: Comparing traj_comp.gro and /build/reproducible-path/votca-2024/csg/src/tools/references/spce/3mols/conf.gro to a tolerance of 5e-05 235/249 Test #212: unit_test_gw ....................................... Passed 2.34 sec 236/249 Test #112: integration_Compare_csg_map_gmx_output ............. Passed 0.08 sec 237/249 Test #114: integration_Compare_csg_map_gmx_xtc_output ......... Passed 0.14 sec 187: Running 2 test cases... 187: 187: *** No errors detected 187:  238/249 Test #187: unit_test_densityintegration ....................... Passed 2.77 sec 183: Running 1 test case... 183: 183: *** No errors detected 183:  239/249 Test #183: unit_test_espfit ................................... Passed 3.07 sec 153: histogram created using 4560 data-rows, written to file_interactions.txt 214: 214: ERROR 2025-6-8 10:4:59 Davidson Solver using 42 threads. 214: ERROR 2025-6-8 10:4:59 Tolerance : 0.0001 214: ERROR 2025-6-8 10:4:59 DPR Correction 214: ERROR 2025-6-8 10:4:59 Matrix size : 240x240 214: ERROR 2025-6-8 10:4:59 iter Search Space Norm 214: ERROR 2025-6-8 10:4:59 0 10 9.85e-02 0.00% converged 214: ERROR 2025-6-8 10:4:59 1 17 1.23e-03 0.00% converged 214: ERROR 2025-6-8 10:4:59 2 24 2.34e-05 100.00% converged 214: ERROR 2025-6-8 10:4:59 Davidson converged after 2 iterations. 214: ERROR 2025-6-8 10:4:59----------------------------------- 214: ERROR 2025-6-8 10:4:59- Davidson ran for 0.255274secs. 214: ERROR 2025-6-8 10:4:59----------------------------------- 214: *** No errors detected 214:  240/249 Test #214: unit_test_davidson ................................. Passed 3.04 sec 248: ... ... 2025-6-8 10:4:58 Using RI 168: Running 3 test cases... 168: 168: *** No errors detected 168:  241/249 Test #168: unit_test_aopotential .............................. Passed 3.62 sec 246: Running 1 test case... 246: 246: *** No errors detected 246:  242/249 Test #246: unit_test_activedftengine .......................... Passed 3.37 sec 153: histogram created using 4560 data-rows, written to file_interactions.txt 211: Running 1 test case... 211: 211: *** No errors detected 211:  243/249 Test #211: unit_test_sigma_cda ................................ Passed 5.36 sec 153: histogram created using 4560 data-rows, written to file_interactions.txt 247: Running 1 test case... 247: 247: *** No errors detected 247:  244/249 Test #247: unit_test_truncdftengine ........................... Passed 6.55 sec 244: Running 2 test cases... 244: 244: *** No errors detected 244:  245/249 Test #244: unit_test_pmlocalization ........................... Passed 6.68 sec 153: histogram created using 4560 data-rows, written to file_interactions.txt 248: ... ... 2025-6-8 10:5:0 Data was created with basis set def2-svp 248: ... ... 2025-6-8 10:5:5 Dipole Moment excited state 1 0.0214404 -0.239573 -2.74726e-05 248: ... ... 2025-6-8 10:5:5 Dipole Moment excited state 2 0.154532 -0.885145 -1.99557e-05 248: ... ... 2025-6-8 10:5:5 Data was created with basis set def2-svp 153: histogram created using 4560 data-rows, written to file_interactions.txt 176: Running 1 test case... 176: 176: *** No errors detected 176:  246/249 Test #176: unit_test_bse ...................................... Passed 9.26 sec 153: histogram created using 4560 data-rows, written to file_interactions.txt 153: histogram created using 4560 data-rows, written to file_interactions.txt 153: 153: *** No errors detected 153:  247/249 Test #153: unit_test_tabulatedpotential ....................... Passed 10.60 sec 248: ... ... 2025-6-8 10:5:5 Transition Dipole Moment 0.754728 0.131574 9.25604e-06 248: ... ... 2025-6-8 10:5:8 Fragment 1 ground state 9.60042e-07 248: ... ... 2025-6-8 10:5:8 Fragment 2 ground state -4.64864e-06 248: ... ... 2025-6-8 10:5:8 Fragment 1 poulation electron -0.4994 248: ... ... 2025-6-8 10:5:8 Fragment 1 poulation hole 0.4994 248: ... ... 2025-6-8 10:5:8 Fragment 2 poulation electron -0.500599 248: ... ... 2025-6-8 10:5:8 Fragment 2 poulation hole 0.5006 227: Running 2 test cases... 227: 227: *** No errors detected 227:  248/249 Test #227: unit_test_dftengine ................................ Passed 12.69 sec 248: ... ... 2025-6-8 10:5:8 dQ11 -1.41042e-06 248: ... ... 2025-6-8 10:5:10 Fragment 1 poulation electron -0.500138 248: ... ... 2025-6-8 10:5:10 Fragment 1 poulation hole 0.500138 248: ... ... 2025-6-8 10:5:10 dQ22 -2.05877e-06 248: ... ... 2025-6-8 10:5:10 Data was created with basis set def2-svp 248: ... ... 2025-6-8 10:5:10 Fragment 1 transition -1.13604e-07 248: ... ... 2025-6-8 10:5:10 Fragment 2 transition -9.55366e-08 248: ... ... 2025-6-8 10:5:10 dQ12 -1.80674e-08 248: *** No errors detected 248:  249/249 Test #248: unit_test_diabatization ............................ Passed 12.96 sec 100% tests passed, 0 tests failed out of 249 Total Test time (real) = 14.38 sec make[1]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-x86_64-linux-gnu && make -j42 install DESTDIR=/build/reproducible-path/votca-2024/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/votca-2024 -B/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/VOTCARC.bash -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_TOOLS/FindFFTW3.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/libvotca_tools.so.2024 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/libvotca_tools.so -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_TOOLS/VOTCA_TOOLS_Targets.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_TOOLS/VOTCA_TOOLS_Targets-none.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_TOOLS/VOTCA_TOOLSConfig.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_TOOLS/VOTCA_TOOLSConfigVersion.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/votca_property -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/votca_property" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/votca_property.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/votca_tools_config.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/NDimVector.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/akimaspline.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/application.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/average.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/calculator.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/colors.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/constants.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/correlate.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/crosscorrelate.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/cubicspline.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/datacollection.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/edge.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/edgecontainer.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/eigen.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/eigenio_matrixmarket.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/eigensystem.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/elements.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/filesystem.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/floatingpointcomparison.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/getline.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/globals.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/graph.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/graph_bf_visitor.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/graph_df_visitor.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/graphalgorithm.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/graphdistvisitor.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/graphnode.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/graphvisitor.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/histogram.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/histogramnew.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/identity.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/lexical_cast.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/linalg.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/linspline.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/mutex.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/name.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/objectfactory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/optionshandler.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/property.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/propertyiomanipulator.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/random.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/rangeparser.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/reducededge.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/reducedgraph.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/spline.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/structureparameters.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/table.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/thread.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/tokenizer.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/types.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/unitconverter.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/tools/version.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man7/votca-tools.7 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/libvotca_csg.so.2024 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/libvotca_csg.so.2024" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/libvotca_csg.so -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_CSG/VOTCA_CSG_Targets.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_CSG/VOTCA_CSG_Targets-none.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_CSG/VOTCA_CSGConfig.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_CSG/VOTCA_CSGConfigVersion.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_reupdate -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_reupdate" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_reupdate.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_map -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_map" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_map.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_dump -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_dump" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_dump.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_property -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_property" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_property.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_resample -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_resample" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_resample.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_stat -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_stat" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_stat.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_fmatch -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_fmatch" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_fmatch.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_gmxtopol -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_gmxtopol" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_gmxtopol.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_dlptopol -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_dlptopol" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_dlptopol.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_density -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_density" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_density.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_imc_solve -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_imc_solve" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_imc_solve.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_boltzmann -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_boltzmann" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_boltzmann.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_fluctuations -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_fluctuations" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_fluctuations.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_orientcorr -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_orientcorr" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_orientcorr.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_part_dist -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_part_dist" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_part_dist.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_partial_rdf -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_partial_rdf" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_partial_rdf.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_radii -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_radii" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_radii.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_sphericalorder -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_sphericalorder" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_sphericalorder.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_traj_force -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_traj_force" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_traj_force.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_call -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_call.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/csg_inverse -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/csg_inverse.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/rc/csg-completion.bash -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/basebead.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/bead.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/beadlist.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/beadmotif.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/beadmotifalgorithms.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/beadmotifconnector.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/beadpair.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/beadstructure.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/beadstructurealgorithms.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/beadtriple.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/boundarycondition.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/cgengine.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/cgmoleculedef.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/cgobserver.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/csgapplication.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/exclusionlist.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/fileformatfactory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/imcio.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/interaction.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/map.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/molecule.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/moleculeitem.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/nblist.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/nblist_3body.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/nblistgrid.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/nblistgrid_3body.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/nematicorder.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/openbox.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/orthorhombicbox.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/pairlist.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/pdbwriter.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/potentialfunction.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/potentialfunctioncbspl.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/potentialfunctionlj126.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/potentialfunctionljg.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/residue.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/topology.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/topologymap.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/topologyreader.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/trajectoryreader.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/trajectorywriter.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/triclinicbox.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/triplelist.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/units.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/version.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/xyzreader.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/csg/xyzwriter.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man7/votca-csg.7 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xml/mapping.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xml/topol.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xml/csg_defaults.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/CsgFunctions.pm -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/CsgSimplex.pm -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/csg_table -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/add_POT.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/add_pot_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/calc_density_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/calc_kbint.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/calc_pressure_gromacs.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/calc_pressure_lammps.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/calc_rdf_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/calc_target_rdf_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/check_csg_xml.py -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/clean_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/cma_processor.py -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/convergence_check_default.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/dist_adjust.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/dist_boltzmann_invert.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/dummy.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/functions_common.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/functions_dlpoly.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/functions_genericsim.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/functions_gromacs.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/iie.py -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/imc_stat_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/initialize_step_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/initialize_step_genericsim.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/initialize_step_optimizer.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/initialize_step_re.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/inverse.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/kbibi_ramp_correction.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/lj_126.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/merge_tables.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/optimizer_parameters_to_potential.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/optimizer_prepare_state.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/optimizer_state_to_mapping.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/optimizer_state_to_potentials.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/optimizer_target_density.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/optimizer_target_pressure.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/optimizer_target_rdf.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/post_add.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/post_add_single.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/post_update_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/post_update_generic_single.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/post_update_re_single.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_acc_convergence.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_average.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_compress.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_convergence.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_copyback.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_dummy.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_overwrite.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_plot.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_shift.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postadd_smooth_at_cut_off.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_addlj.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_cibi_correction.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_extrapolate.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_ibi.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_kbibi_correction.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_pressure.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_scale.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_smooth.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/postupd_splinesmooth.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/potential_extrapolate.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/potential_shift.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/potential_to_dlpoly.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/potential_to_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/potential_to_gromacs.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/potential_to_lammps.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/potentials_to_dlpoly.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/potentials_to_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/pre_update_re.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/prepare_generic.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/prepare_generic_single.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/prepare_iie.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/prepare_imc.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/prepare_optimizer.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/prepare_optimizer_single.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/prepare_re.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/pressure_cor_simple.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/pressure_cor_wjk.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/resample_target.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/run_genericsim.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/run_gromacs.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/simplex_downhill_processor.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/skeleton.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/skeleton.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/start_framework.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_average.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_change_flag.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_combine.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_dummy.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_extrapolate.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_functional.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_get_value.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_integrate.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/table_linearop.pl -- Installing: 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Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/update_ibi_pot.pl -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/update_ibi_single.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/update_iie.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/update_imc.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/update_imc_single.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/update_optimizer.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/update_optimizer_single.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/scripts/inverse/update_re.sh -- Installing: 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/build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/basisset.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/bfgs_trm.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/bse.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/bse_operator.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/bse_population.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/bsecoupling.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/bseoperator_btda.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/calculatorfactory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/chargecarrier.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/checkpoint.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/checkpoint_utils.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/checkpointreader.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/checkpointtable.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/checkpointwriter.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/classicalsegment.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/convergenceacc.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/couplingbase.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/cubefile_writer.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/cudamatrix.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/cudapipeline.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/davidsonsolver.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/density_integration.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/dftcoupling.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/dftengine.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/diis.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/dipoledipoleinteraction.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/ecpaobasis.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/ecpbasisset.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/eeinteractor.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/eigen.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/energy_terms.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/erdiabatization.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/esp2multipole.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/espfit.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/fcddiabatization.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/filterfactory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/gaussianwriter.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/glink.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/gmhdiabatization.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/gnode.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/grid.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/grid_containers.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/gridbox.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/gw.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/gwbse.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/gwbseengine.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/gyration.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/hist.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/huffmantree.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/job.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/jobcalculator.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/jobcalculatorfactory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/jobtopology.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/kmccalculator.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/logger.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/make_libint_work.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/matrixfreeoperator.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/md2qmengine.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/mmregion.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/molden.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/nbo.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/newton_rapson.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/openmp_cuda.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/optimiser_costfunction.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/orbitals.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/orbreorder.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/paircalculator.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/parallelxjobcalc.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/pmlocalization.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/polarregion.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/polarsite.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/populationanalysis.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/ppm.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/progressobserver.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmatom.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmcalculator.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmfragment.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmmolecule.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmnblist.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmpackage.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmpackagefactory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmpair.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmregion.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmstate.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmthread.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/qmtool.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/quadrature_factory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/radial_euler_maclaurin_rule.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/rate_engine.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/region.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/regular_grid.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/rpa.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/segid.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/segment.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/segmentmapper.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/sigma_base.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/sigmafactory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/sphere_lebedev_rule.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/stateapplication.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/statefilter_base.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/statesaver.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/statetracker.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/staticregion.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/staticsite.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/symmetric_matrix.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/threecenter.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/toolfactory.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/topology.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/transition_densities.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/trustregion.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/vc2index.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/version.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/vxc_functionals.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/vxc_grid.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/vxc_potential.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/include/votca/xtp/xtpapplication.h -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_basisset -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_basisset.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_update_mapfile -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_update_mapfile.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_modify_jobfile -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_modify_jobfile.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_autogen_mapping -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_autogen_mapping.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_qmmm2qm -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_qmmm2qm.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/libvotca_xtp.so.2024 -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/libvotca_xtp.so.2024" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/libvotca_xtp.so -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_XTP/VOTCA_XTP_Targets.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_XTP/VOTCA_XTP_Targets-none.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_XTP/VOTCA_XTPConfig.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/lib/x86_64-linux-gnu/cmake/VOTCA_XTP/VOTCA_XTPConfigVersion.cmake -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_map -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_map" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_map.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_run -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_run" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_run.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_tools -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_tools" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_tools.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_parallel -- Set non-toolchain portion of runtime path of "/build/reproducible-path/votca-2024/debian/tmp/usr/bin/xtp_parallel" to "" -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/man/man1/xtp_parallel.1 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/3-21G.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/6-311++G(2p,2d).xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/6-311++G.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/6-311+G(2d,p).xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/6-311+G**.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/6-311G.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/6-31G**.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/6-31G.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/Weigend_coulomb_fitting.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/ahlrichs_coulomb_fitting.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aug-cc-pvdz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aug-cc-pvqz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aug-cc-pvtz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-aug-cc-pvdz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-aug-cc-pvqz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-aug-cc-pvtz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-cc-pv5z.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-cc-pvdz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-cc-pvqz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-cc-pvtz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-qzvp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-qzvpp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-qzvppd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-sv(p).xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-svp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-svpd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-tzvp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-tzvpd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-tzvpp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-def2-tzvppd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-ubecppol.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/aux-ubecppol_0.2.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/cc-pvdz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/cc-pvqz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/cc-pvtz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-qzvp-ecp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-qzvp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-qzvpd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-qzvpp-ecp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-qzvpp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-qzvppd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-sv(p).xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-svp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-svpd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-tzvp-ecp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-tzvp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-tzvpd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-tzvpp-ecp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-tzvpp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/def2-tzvppd.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/optaux-aug-cc-pvdz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/optaux-aug-cc-pvqz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/optaux-aug-cc-pvtz.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/ubecp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/ubecppol.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/basis_sets/ubecppoldiff.xml -- Installing: 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-- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/gencube.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/gpu_benchmark.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/ianalyze.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/iexcitoncl.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/iqm.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/kmclifetime.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/kmcmultiple.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/log2mps.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/mapchecker.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/mol2orb.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/molpol.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/neighborlist.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/orb2fchk.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/orb2mol.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/partialcharges.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/qmmm.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/spectrum.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/vaverage.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/bsecoupling.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/dftcoupling.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/dftpackage.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/esp2multipole.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/gwbse.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/localize.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/polar.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/region.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/xml/subpackages/statetracker.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/ecps/CRENBL_ECP.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/ecps/ECP2SDF.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/ecps/SBKJC_ECP.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/ecps/corelevels.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/ecps/def2-ecp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/ecps/ecp.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/xtp_benchmark -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Benzene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Pentacene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Naphthalene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Hexacene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Octacene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Tetracene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Anthracene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Heptacene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Decacene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Aromatic_hydrocarbons/Nonacene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/nucleobases -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/nucleobases/cytosine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/nucleobases/uracil.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/nucleobases/adenine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/nucleobases/thymine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/unsaturated_aliphatic_hydrocarbons -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/unsaturated_aliphatic_hydrocarbons/octatetraene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/unsaturated_aliphatic_hydrocarbons/norbornadiene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/unsaturated_aliphatic_hydrocarbons/cyclopentadiene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/unsaturated_aliphatic_hydrocarbons/hexatriene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/unsaturated_aliphatic_hydrocarbons/butadiene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/unsaturated_aliphatic_hydrocarbons/ethene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/unsaturated_aliphatic_hydrocarbons/cyclopropene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/triazine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/pyrazine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/furan.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/benzene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/naphthalene.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/pyrrole.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/imidazole.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/pyrimidine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/tetrazine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/pyridine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aromatic_hydrocarbons_and_heterocycles/pyridazine.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aldehydes_ketones_and_amides -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aldehydes_ketones_and_amides/formaldehyde.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aldehydes_ketones_and_amides/acetone.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aldehydes_ketones_and_amides/formamide.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aldehydes_ketones_and_amides/propanamide.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aldehydes_ketones_and_amides/benzoquinone.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/Geometries/Geometries_ThielSet/aldehydes_ketones_and_amides/acetamide.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp/benchmark/xtp_benchmark -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/tools -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/tools/pyxtp -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/tools/pyxtp/PYXTP.ipynb -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/tools/dftgwbse_CH4 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/tools/dftgwbse_CH4/dftgwbse2.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/tools/dftgwbse_CH4/DFTGWBSE_ENERGY.ipynb -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/tools/dftgwbse_CH4/methane.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/GROMACS -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/GROMACS/Methane -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/GROMACS/Methane/QMMM_GROMACS.ipynb -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/GROMACS/Methane/iqm.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/GROMACS/Methane/qmmm_mm.xml -- Installing: 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/build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/nGEO/electron/system.gbw -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/nGEO/electron/system.inp -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/nGEO/electron/system.log -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/nGEO/electron/system_property.txt -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/system.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/neutral -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/neutral/system.prop -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/neutral/system.gbw -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/neutral/system.inp -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/neutral/system.log -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/neutral/system_property.txt -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/hole -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/hole/system.prop -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/hole/system.gbw -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/hole/system.inp -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/hole/system.log -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/hGEO/hole/system_property.txt -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/Reorg_summary.csv -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/system.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/neutral -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/neutral/system.prop -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/neutral/system.gbw -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/neutral/system.inp -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/neutral/system.log -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/neutral/system_property.txt -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/electron -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/electron/system.prop -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/electron/system.gbw -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/electron/system.inp -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/electron/system.log -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/QC_FILES/REORG/eGEO/electron/system_property.txt -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/qmmm.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/system.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/qmmm.jobs -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/LAMMPS/Thiophene/eqm.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/README.rst -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/clean_notebooks.sh -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/MP_FILES -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/MP_FILES/Methane_e.mps -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/MP_FILES/Methane_h.mps -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/MP_FILES/Methane_s1.mps -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/MP_FILES/Methane_n2s1.mps -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/MP_FILES/Methane_n.mps -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/methane.orb -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/methane_summary.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/state.hdf5 -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/mapchecker.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/dftgwbse.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/system.xml -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/files_examples/methane.xyz -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/single_point.ipynb -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/scripts -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/scripts/run_mapchecker.py -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/scripts/run_energy.py -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/scripts/run_optimization.py -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/scripts/run_gradient.py -- Installing: /build/reproducible-path/votca-2024/debian/tmp/usr/share/votca/xtp-tutorials/pyxtp/geometry_optimization.ipynb make[1]: Leaving directory '/build/reproducible-path/votca-2024/obj-x86_64-linux-gnu' dh_install debian/rules override_dh_installdocs make[1]: Entering directory '/build/reproducible-path/votca-2024' mkdir -p /build/reproducible-path/votca-2024/debian/tmp/usr/share/doc/votca/html test -d /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx.html && \ cp -aru /build/reproducible-path/votca-2024/obj-x86_64-linux-gnu/sphinx.html/* /build/reproducible-path/votca-2024/debian/tmp/usr/share/doc/votca/html/ dh_installdocs dh_link -i make[1]: Leaving directory '/build/reproducible-path/votca-2024' dh_sphinxdoc dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/votca-data/usr/share/doc/votca-data/html/_static/js/html5shiv.min.js dh_installchangelogs dh_installman dh_bash-completion dh_python3 dh_lintian dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package votca-tutorials: substitution variable ${python3:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'libvotca-dev' in '../libvotca-dev_2024-2_amd64.deb'. dpkg-deb: building package 'libvotca-2024' in '../libvotca-2024_2024-2_amd64.deb'. dpkg-deb: building package 'libvotca-2024-dbgsym' in '../libvotca-2024-dbgsym_2024-2_amd64.deb'. dpkg-deb: building package 'votca-data' in '../votca-data_2024-2_all.deb'. dpkg-deb: building package 'votca-tutorials' in '../votca-tutorials_2024-2_all.deb'. dpkg-deb: building package 'votca' in '../votca_2024-2_amd64.deb'. dpkg-deb: building package 'votca-dbgsym' in '../votca-dbgsym_2024-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../votca_2024-2_amd64.buildinfo dpkg-genchanges --build=binary -O../votca_2024-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1102727 and its subdirectories I: Current time: Sun Jun 8 10:07:58 -12 2025 I: pbuilder-time-stamp: 1749420478 Mon May 6 15:45:01 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Mon May 6 15:45:01 UTC 2024 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Mon May 6 16:37:01 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Mon May 6 16:37:02 UTC 2024 I: votca_2024-2_amd64.changes: Format: 1.8 Date: Wed, 28 Feb 2024 19:52:32 -0800 Source: votca Binary: libvotca-2024 libvotca-2024-dbgsym libvotca-dev votca votca-data votca-dbgsym votca-tutorials Architecture: amd64 all Version: 2024-2 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Nicholas Breen Description: libvotca-2024 - VOTCA molecular dynamics analysis - shared libraries libvotca-dev - VOTCA molecular dynamics analysis - development files votca - Molecular dynamics analysis - coarse-graining and charge transpor votca-data - VOTCA molecular dynamics analysis - basis sets and scripts votca-tutorials - VOTCA molecular dynamics analysis - tutorials Changes: votca (2024-2) unstable; urgency=medium . * Upload to unstable. * control: Replace B-D on pkg-config with pkgconf. Checksums-Sha1: 0fdd25767f2534924838981c37d865f87ebf3adc 147944348 libvotca-2024-dbgsym_2024-2_amd64.deb 3fcaf38849f9b44238b3737f78b15b42c2205e8e 12925788 libvotca-2024_2024-2_amd64.deb 827562b1efeff679ff43eaf94935acfe2fed7d1e 144832 libvotca-dev_2024-2_amd64.deb 9cdcd6a0503471538c3a07e3169a7b243ec374df 3812688 votca-data_2024-2_all.deb 5b810b854909a8104c027b302537c898237421db 20853308 votca-dbgsym_2024-2_amd64.deb 2d861fe4e11161201393a4e767d512976b89db44 18231968 votca-tutorials_2024-2_all.deb 55d266d56231a6992b6cab94deff32f45b3ffa7f 22833 votca_2024-2_amd64.buildinfo 3a51cdbee915c0cb3bca4a547a0dff23893eabc9 647376 votca_2024-2_amd64.deb Checksums-Sha256: d09c41a50771f6640a45a5866027d0d85e628901dca837d3e393ab9596323163 147944348 libvotca-2024-dbgsym_2024-2_amd64.deb bdcc1d0986ecef63b9a2d0bfe3865a64948757682ef4b60b6748a47b4a54b2d8 12925788 libvotca-2024_2024-2_amd64.deb 018a2bc368d0bb699777367c42a8e90be03cdf0fbe983fb6a795339915a99013 144832 libvotca-dev_2024-2_amd64.deb 8a5e232516f44ebe12b619ad915f2c8d0317267d4b125f3f28243ad6376f0515 3812688 votca-data_2024-2_all.deb a71439d4f495679ec1bec545f1eecdceaaa1e6b393a90915a80aaccfdf9eba49 20853308 votca-dbgsym_2024-2_amd64.deb 36ded532e993a07b9e3eedbcdf9a196feceabcf04247793eab0ae6f9c79b4244 18231968 votca-tutorials_2024-2_all.deb 02b85b9a62c9beca45c54412f1c6747fce9cdfe178b394e9c011cc0f74f141b2 22833 votca_2024-2_amd64.buildinfo a67f50020e747143eb683fa2ec88729c93a6aa8d581665a60a18dd896ad8603f 647376 votca_2024-2_amd64.deb Files: 0cfe26ae5a7ce21d53978785f8fc605a 147944348 debug optional libvotca-2024-dbgsym_2024-2_amd64.deb a21c9616c1df915342f6723b10d39dac 12925788 libs optional libvotca-2024_2024-2_amd64.deb d49f27de92c6353234214c935d5e6d01 144832 libdevel optional libvotca-dev_2024-2_amd64.deb 47a9eb4bc32d446ba23176c7c8d01888 3812688 science optional votca-data_2024-2_all.deb cb815aeb91e08d7920cd24a7c4a51a88 20853308 debug optional votca-dbgsym_2024-2_amd64.deb 43ee4617c8e5dd7245dc756e362b2092 18231968 science optional votca-tutorials_2024-2_all.deb 03bbdd03e0d82e0c9db9a2d3770df4f9 22833 science optional votca_2024-2_amd64.buildinfo 5560928a4c53428a31925be1f34e0d01 647376 science optional votca_2024-2_amd64.deb Mon May 6 16:37:06 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_10-5252.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.GJAzBulJ/votca_2024-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.GJAzBulJ/votca_2024-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.GJAzBulJ/votca_2024-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.GJAzBulJ/b1/votca_2024-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.GJAzBulJ/b2/votca_2024-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 2.454s) 2.454s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 2.099s) 2.099s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2.784s CPU time consumed: 2.783s Mon May 6 16:37:10 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Mon May 6 16:37:10 UTC 2024 I: votca from unstable built successfully and reproducibly on amd64. Mon May 6 16:37:11 UTC 2024 I: Submitting .buildinfo files to external archives: Mon May 6 16:37:11 UTC 2024 I: Submitting 24K b1/votca_2024-2_amd64.buildinfo.asc Mon May 6 16:37:12 UTC 2024 I: Submitting 24K b2/votca_2024-2_amd64.buildinfo.asc Mon May 6 16:37:13 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 6 16:37:13 UTC 2024 I: Done submitting .buildinfo files. Mon May 6 16:37:13 UTC 2024 I: Removing signed votca_2024-2_amd64.buildinfo.asc files: removed './b1/votca_2024-2_amd64.buildinfo.asc' removed './b2/votca_2024-2_amd64.buildinfo.asc'