Fri May 17 19:51:37 UTC 2024 I: starting to build avogadrolibs/unstable/i386 on jenkins on '2024-05-17 19:51' Fri May 17 19:51:37 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_13/19755/console.log Fri May 17 19:51:37 UTC 2024 I: Downloading source for unstable/avogadrolibs=1.99.0-5 --2024-05-17 19:51:38-- http://deb.debian.org/debian/pool/main/a/avogadrolibs/avogadrolibs_1.99.0-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2728 (2.7K) [text/prs.lines.tag] Saving to: ‘avogadrolibs_1.99.0-5.dsc’ 0K .. 100% 290M=0s 2024-05-17 19:51:38 (290 MB/s) - ‘avogadrolibs_1.99.0-5.dsc’ saved [2728/2728] Fri May 17 19:51:38 UTC 2024 I: avogadrolibs_1.99.0-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: avogadrolibs Binary: avogadro-utils, libavogadro2-1t64, libavogadro-dev, libavogadro-data, libavogadro-doc, python3-avogadro Architecture: any all Version: 1.99.0-5 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: https://avogadro.cc/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/debichem-team/avogadrolibs Vcs-Git: https://salsa.debian.org/debichem-team/avogadrolibs.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, libgtest-dev Build-Depends: dpkg-dev (>= 1.22.5), cmake, debhelper-compat (= 13), dh-python, libarchive-dev, libeigen3-dev (>> 3.3), libgl2ps-dev, libglew-dev, libglvnd-dev, libhdf5-dev, libjs-mathjax, libsymspg-dev, molequeue, libmolequeue-dev, openbabel, pkgconf, python3-dev, python3-pybind11, python3-skbuild, python3-wheel, libqt5opengl5-dev, libqt5svg5-dev, qttools5-dev, zlib1g-dev Build-Depends-Indep: doxygen, graphviz Package-List: avogadro-utils deb science optional arch=any libavogadro-data deb libdevel optional arch=all libavogadro-dev deb libs optional arch=any libavogadro-doc deb doc optional arch=all libavogadro2-1t64 deb libs optional arch=any python3-avogadro deb python optional arch=any Checksums-Sha1: 05be339222925b0a339ccbe7c45da95696a43cfc 4858298 avogadrolibs_1.99.0.orig.tar.gz 2f5de055ab942019902febdb7db356b7c6a80fe3 31537416 avogadrolibs_1.99.0-5.debian.tar.xz Checksums-Sha256: 34808e3c602b0f60f3c160ff0220832aee777db86e962e3f958c6327fb434063 4858298 avogadrolibs_1.99.0.orig.tar.gz b1b60308ea414f03f1f6d6a35f03b7bc3dc80e5c53562ee5f38ca16c5325d7a9 31537416 avogadrolibs_1.99.0-5.debian.tar.xz Files: d8499508e5a67e01bcfec367e3df23e9 4858298 avogadrolibs_1.99.0.orig.tar.gz 9a9ab5e9ba57e570ff57cf98a5febdfb 31537416 avogadrolibs_1.99.0-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmXo+H8ACgkQVz7x5L1a Afq0NBAApA7f8JEZhr1IIA2v7Y2eoTxUeTd53yK/dNbQvwop/yzn3PMCXOGJprKE q+15wWJDLONQCe111PeB+ahwy/CHjc7NOFdD24+wJf5s/81N0rRN5MN3I7yAimDs iaCMrEJlf78Wy5lZmUqZYd4BtrkPJem4yJbtj0rCC9bu0TjcL2NsDlZl03Jdz6FZ +w+v+AqFZMxzYehEUO5h7mfjxKF23t6qv/1JuQArEpC39tDYhwh2L6VKHBjAuK+t tUF64WV1RBvPTQxWF38qAfbf23xQaarVYjHF+hcQeiTl79H1Ke0xomCABvy0yUvi qtgae+cNO85F6EN7BFIJDhyFqX3/i18eFytnIma3qpoKHOpbZulpBnd9xJ4kDSRA /LxPscNTFryiCUoxYwkod+9TJ9ydlVrDwF3szy9/aGL/AX0BpGzantGR783GJFR9 SLrt31rgr8ZbJ4w/ZamFzXUQ7iSD60JBkjccj2ttFHZZeJ+Ewj4IzWZmFS6wCw8v /l4Tv2VWWvrUvelRzJ7Nr991QEnMjWFtqpAMo2QRzznkUCXnuoPqpJwg/UV/IzB4 JayUBvS2VJRMXXOmhn2TyR1HXZqwR3Hkez9q1oOCtFDEBYUdJIGU7PM2uzUPhJe4 iSNcEHiyUJLtm+cVrg1b6tkNbm211c0dQrGPqSMs/bhE242dn+c= =oXhA -----END PGP SIGNATURE----- Fri May 17 19:51:38 UTC 2024 I: Checking whether the package is not for us Fri May 17 19:51:38 UTC 2024 I: Starting 1st build on remote node infom07-i386.debian.net. Fri May 17 19:51:38 UTC 2024 I: Preparing to do remote build '1' on infom07-i386.debian.net. Fri May 17 20:01:04 UTC 2024 I: Deleting $TMPDIR on infom07-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri May 17 07:51:41 -12 2024 I: pbuilder-time-stamp: 1715975501 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [avogadrolibs_1.99.0-5.dsc] I: copying [./avogadrolibs_1.99.0.orig.tar.gz] I: copying [./avogadrolibs_1.99.0-5.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Mar 6 23:13:03 2024 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./avogadrolibs_1.99.0-5.dsc: no acceptable signature found dpkg-source: info: extracting avogadrolibs in avogadrolibs-1.99.0 dpkg-source: info: unpacking avogadrolibs_1.99.0.orig.tar.gz dpkg-source: info: unpacking avogadrolibs_1.99.0-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying set_fragments_PR1612.patch dpkg-source: info: applying script_hashbang.patch dpkg-source: info: applying qtplugins_insertfragment.patch dpkg-source: info: applying fix_test_qtgui.patch dpkg-source: info: applying doc_mathjax.patch dpkg-source: info: applying use_overlayaxes.patch dpkg-source: info: applying tests_find_avogadrolibs.patch dpkg-source: info: applying tests_skip_spacegroup_HallNumber0.patch dpkg-source: info: applying fix_startup_crash_PR1621.patch dpkg-source: info: applying fetch_PDB_PR1642.patch dpkg-source: info: applying fetch_PDB_error_check_PR1646.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/30109/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=6 ' DISTRIBUTION='unstable' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='256285f7125a4179812a1c8ac947406c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='30109' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Jz2KCNve/pbuilderrc_8MwE --distribution unstable --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Jz2KCNve/b1 --logfile b1/build.log avogadrolibs_1.99.0-5.dsc' SUDO_GID='111' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom07-i386 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 17 14:57 /bin -> usr/bin I: user script /srv/workspace/pbuilder/30109/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), cmake, debhelper-compat (= 13), dh-python, libarchive-dev, libeigen3-dev (>> 3.3), libgl2ps-dev, libglew-dev, libglvnd-dev, libhdf5-dev, libjs-mathjax, libsymspg-dev, molequeue, libmolequeue-dev, openbabel, pkgconf, python3-dev, python3-pybind11, python3-skbuild, python3-wheel, libqt5opengl5-dev, libqt5svg5-dev, qttools5-dev, zlib1g-dev, doxygen, graphviz dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on libarchive-dev; however: Package libarchive-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev (>> 3.3); however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgl2ps-dev; however: Package libgl2ps-dev is not installed. pbuilder-satisfydepends-dummy depends on libglew-dev; however: Package libglew-dev is not installed. pbuilder-satisfydepends-dummy depends on libglvnd-dev; however: Package libglvnd-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on libjs-mathjax; however: Package libjs-mathjax is not installed. pbuilder-satisfydepends-dummy depends on libsymspg-dev; however: Package libsymspg-dev is not installed. pbuilder-satisfydepends-dummy depends on molequeue; however: Package molequeue is not installed. pbuilder-satisfydepends-dummy depends on libmolequeue-dev; however: Package libmolequeue-dev is not installed. pbuilder-satisfydepends-dummy depends on openbabel; however: Package openbabel is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. pbuilder-satisfydepends-dummy depends on python3-dev; however: Package python3-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-pybind11; however: Package python3-pybind11 is not installed. pbuilder-satisfydepends-dummy depends on python3-skbuild; however: Package python3-skbuild is not installed. pbuilder-satisfydepends-dummy depends on python3-wheel; however: Package python3-wheel is not installed. pbuilder-satisfydepends-dummy depends on libqt5opengl5-dev; however: Package libqt5opengl5-dev is not installed. pbuilder-satisfydepends-dummy depends on libqt5svg5-dev; however: Package libqt5svg5-dev is not installed. pbuilder-satisfydepends-dummy depends on qttools5-dev; however: Package qttools5-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-mathjax{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} hdf5-helpers{a} icu-devtools{a} intltool-debian{a} iso-codes{a} libabsl20230802{a} libacl1-dev{a} libaec-dev{a} libaec0{a} libaom3{a} libarchive-dev{a} libarchive-zip-perl{a} libarchive13t64{a} libattr1-dev{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libavif16{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcairo2{a} libcap2-bin{a} libcdt5{a} libcgraph6{a} libclang-cpp16t64{a} libclang1-15t64{a} libclang1-16t64{a} libcom-err2{a} libcups2t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdatrie1{a} libdav1d7{a} libdbus-1-3{a} libde265-0{a} libdebhelper-perl{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libdw1t64{a} libedit2{a} libegl-dev{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libevdev2{a} libexpat1{a} libexpat1-dev{a} libext2fs-dev{a} libext2fs2t64{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgav1-1{a} libgbm1{a} libgd3{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dev{a} libgl1-mesa-dri{a} libgl2ps-dev{a} libgl2ps1.4{a} libglapi-mesa{a} libgles-dev{a} libgles1{a} libgles2{a} libglew-dev{a} libglew2.2{a} libglib2.0-0t64{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgstreamer-plugins-base1.0-0{a} libgstreamer1.0-0{a} libgts-0.7-5t64{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libheif-plugin-dav1d{a} libheif-plugin-libde265{a} libheif1{a} libhyphen0{a} libice6{a} libicu-dev{a} libicu72{a} libinchi1{a} libinput-bin{a} libinput10{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} libldap-2.5-0{a} liblerc4{a} libllvm15t64{a} libllvm16t64{a} libllvm17t64{a} libltdl7{a} liblz4-dev{a} liblzma-dev{a} libmaeparser1{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmolequeue-dev{a} libmtdev1t64{a} libnghttp2-14{a} libopenbabel7{a} libopengl-dev{a} libopengl0{a} liborc-0.4-0t64{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpciaccess0{a} libpcre2-16-0{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpthread-stubs0-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libqt5concurrent5t64{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5designercomponents5{a} libqt5gui5t64{a} libqt5help5{a} libqt5network5t64{a} libqt5opengl5-dev{a} libqt5opengl5t64{a} libqt5positioning5{a} libqt5printsupport5t64{a} libqt5qml5{a} libqt5qmlmodels5{a} libqt5quick5{a} libqt5quickwidgets5{a} libqt5sensors5{a} libqt5sql5-sqlite{a} libqt5sql5t64{a} libqt5svg5{a} libqt5svg5-dev{a} libqt5test5t64{a} libqt5webchannel5{a} libqt5webkit5{a} libqt5widgets5t64{a} libqt5xml5t64{a} librav1e0{a} libreadline8t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libssh2-1t64{a} libssl-dev{a} libsub-override-perl{a} libsymspg-dev{a} libsymspg2{a} libsz2{a} libthai-data{a} libthai0{a} libtiff6{a} libtool{a} libuchardet0{a} libunwind8{a} libuv1t64{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-server0{a} libwebp7{a} libwoff1{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxfixes3{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxt6t64{a} libxxf86vm1{a} libyuv0{a} libz3-4{a} libzstd-dev{a} lsb-release{a} m4{a} man-db{a} media-types{a} molequeue{a} netbase{a} nettle-dev{a} openbabel{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybind11-dev{a} python3{a} python3-dev{a} python3-distro{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-packaging{a} python3-pkg-resources{a} python3-pybind11{a} python3-setuptools{a} python3-skbuild{a} python3-wheel{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} qdoc-qt5{a} qhelpgenerator-qt5{a} qt5-assistant{a} qt5-qmake{a} qt5-qmake-bin{a} qtattributionsscanner-qt5{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} qttools5-dev{a} qttools5-dev-tools{a} readline-common{a} sensible-utils{a} shared-mime-info{a} tzdata{a} x11-common{a} x11proto-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl dbus fonts-liberation2 geoclue-2.0 gstreamer1.0-plugins-base javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgts-bin libheif-plugin-aomenc libheif-plugin-x265 libldap-common libltdl-dev libmail-sendmail-perl libpam-cap libsasl2-modules lynx mesa-vulkan-drivers psmisc publicsuffix python3-numpy qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 wget xdg-user-dirs 0 packages upgraded, 343 newly installed, 0 to remove and 0 not upgraded. Need to get 299 MB of archives. After unpacking 1313 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main i386 libglib2.0-0t64 i386 2.80.2-1 [1555 kB] Get: 2 http://deb.debian.org/debian unstable/main i386 libdrm-common all 2.4.120-2 [7688 B] Get: 3 http://deb.debian.org/debian unstable/main i386 libdrm2 i386 2.4.120-2 [41.4 kB] Get: 4 http://deb.debian.org/debian unstable/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 5 http://deb.debian.org/debian unstable/main i386 libdw1t64 i386 0.191-1+b1 [277 kB] Get: 6 http://deb.debian.org/debian unstable/main i386 libunwind8 i386 1.6.2-3+b1 [49.2 kB] Get: 7 http://deb.debian.org/debian unstable/main i386 libcap2-bin i386 1:2.66-5 [34.7 kB] Get: 8 http://deb.debian.org/debian unstable/main i386 libgstreamer1.0-0 i386 1.24.3-1 [1430 kB] Get: 9 http://deb.debian.org/debian unstable/main i386 liborc-0.4-0t64 i386 1:0.4.38-1 [199 kB] Get: 10 http://deb.debian.org/debian unstable/main i386 iso-codes all 4.16.0-1 [2936 kB] Get: 11 http://deb.debian.org/debian unstable/main i386 libgstreamer-plugins-base1.0-0 i386 1.24.3-1 [1009 kB] Get: 12 http://deb.debian.org/debian unstable/main i386 libhyphen0 i386 2.8.8-7+b1 [30.8 kB] Get: 13 http://deb.debian.org/debian unstable/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 14 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo i386 1:2.1.5-3 [169 kB] Get: 15 http://deb.debian.org/debian unstable/main i386 libpng16-16t64 i386 1.6.43-5 [286 kB] Get: 16 http://deb.debian.org/debian unstable/main i386 libxml2 i386 2.9.14+dfsg-1.3+b3 [727 kB] Get: 17 http://deb.debian.org/debian unstable/main i386 shared-mime-info i386 2.4-4 [760 kB] Get: 18 http://deb.debian.org/debian unstable/main i386 libdouble-conversion3 i386 3.3.0-1+b1 [44.9 kB] Get: 19 http://deb.debian.org/debian unstable/main i386 libpcre2-16-0 i386 10.42-4+b1 [244 kB] Get: 20 http://deb.debian.org/debian unstable/main i386 libqt5core5t64 i386 5.15.10+dfsg-7.2+b1 [2696 kB] Get: 21 http://deb.debian.org/debian unstable/main i386 libexpat1 i386 2.6.2-1 [107 kB] Get: 22 http://deb.debian.org/debian unstable/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 23 http://deb.debian.org/debian unstable/main i386 libfreetype6 i386 2.13.2+dfsg-1+b4 [449 kB] Get: 24 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 25 http://deb.debian.org/debian unstable/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 26 http://deb.debian.org/debian unstable/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 27 http://deb.debian.org/debian unstable/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 28 http://deb.debian.org/debian unstable/main i386 fontconfig i386 2.15.0-1.1 [462 kB] Get: 29 http://deb.debian.org/debian unstable/main i386 libglvnd0 i386 1.7.0-1+b1 [44.4 kB] Get: 30 http://deb.debian.org/debian unstable/main i386 libwayland-server0 i386 1.22.0-2.1+b1 [34.8 kB] Get: 31 http://deb.debian.org/debian unstable/main i386 libxau6 i386 1:1.0.9-1+b1 [18.5 kB] Get: 32 http://deb.debian.org/debian unstable/main i386 libbsd0 i386 0.12.2-1 [134 kB] Get: 33 http://deb.debian.org/debian unstable/main i386 libxdmcp6 i386 1:1.1.2-3+b1 [24.8 kB] Get: 34 http://deb.debian.org/debian unstable/main i386 libxcb1 i386 1.17.0-1 [148 kB] Get: 35 http://deb.debian.org/debian unstable/main i386 libxcb-randr0 i386 1.17.0-1 [117 kB] Get: 36 http://deb.debian.org/debian unstable/main i386 libgbm1 i386 24.0.7-1 [42.0 kB] Get: 37 http://deb.debian.org/debian unstable/main i386 libglapi-mesa i386 24.0.7-1 [36.1 kB] Get: 38 http://deb.debian.org/debian unstable/main i386 libwayland-client0 i386 1.22.0-2.1+b1 [26.4 kB] Get: 39 http://deb.debian.org/debian unstable/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 40 http://deb.debian.org/debian unstable/main i386 libx11-6 i386 2:1.8.7-1+b1 [822 kB] Get: 41 http://deb.debian.org/debian unstable/main i386 libx11-xcb1 i386 2:1.8.7-1+b1 [232 kB] Get: 42 http://deb.debian.org/debian unstable/main i386 libxcb-dri2-0 i386 1.17.0-1 [106 kB] Get: 43 http://deb.debian.org/debian unstable/main i386 libxcb-dri3-0 i386 1.17.0-1 [107 kB] Get: 44 http://deb.debian.org/debian unstable/main i386 libxcb-present0 i386 1.17.0-1 [105 kB] Get: 45 http://deb.debian.org/debian unstable/main i386 libxcb-sync1 i386 1.17.0-1 [108 kB] Get: 46 http://deb.debian.org/debian unstable/main i386 libxcb-xfixes0 i386 1.17.0-1 [109 kB] Get: 47 http://deb.debian.org/debian unstable/main i386 libxshmfence1 i386 1.3-1+b1 [9028 B] Get: 48 http://deb.debian.org/debian unstable/main i386 libegl-mesa0 i386 24.0.7-1 [128 kB] Get: 49 http://deb.debian.org/debian unstable/main i386 libegl1 i386 1.7.0-1+b1 [36.2 kB] Get: 50 http://deb.debian.org/debian unstable/main i386 libxcb-glx0 i386 1.17.0-1 [123 kB] Get: 51 http://deb.debian.org/debian unstable/main i386 libxcb-shm0 i386 1.17.0-1 [105 kB] Get: 52 http://deb.debian.org/debian unstable/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 53 http://deb.debian.org/debian unstable/main i386 libxfixes3 i386 1:6.0.0-2+b1 [20.7 kB] Get: 54 http://deb.debian.org/debian unstable/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB] Get: 55 http://deb.debian.org/debian unstable/main i386 libvulkan1 i386 1.3.280.0-1 [132 kB] Get: 56 http://deb.debian.org/debian unstable/main i386 libdrm-amdgpu1 i386 2.4.120-2 [24.4 kB] Get: 57 http://deb.debian.org/debian unstable/main i386 libpciaccess0 i386 0.17-3+b1 [53.8 kB] Get: 58 http://deb.debian.org/debian unstable/main i386 libdrm-intel1 i386 2.4.120-2 [66.5 kB] Get: 59 http://deb.debian.org/debian unstable/main i386 libdrm-nouveau2 i386 2.4.120-2 [20.8 kB] Get: 60 http://deb.debian.org/debian unstable/main i386 libdrm-radeon1 i386 2.4.120-2 [23.0 kB] Get: 61 http://deb.debian.org/debian unstable/main i386 libedit2 i386 3.1-20230828-1+b1 [97.8 kB] Get: 62 http://deb.debian.org/debian unstable/main i386 libz3-4 i386 4.8.12-3.1+b2 [7989 kB] Get: 63 http://deb.debian.org/debian unstable/main i386 libllvm17t64 i386 1:17.0.6-12 [27.7 MB] Get: 64 http://deb.debian.org/debian unstable/main i386 libsensors-config all 1:3.6.0-9 [14.6 kB] Get: 65 http://deb.debian.org/debian unstable/main i386 libsensors5 i386 1:3.6.0-9 [35.4 kB] Get: 66 http://deb.debian.org/debian unstable/main i386 libgl1-mesa-dri i386 24.0.7-1 [8457 kB] Get: 67 http://deb.debian.org/debian unstable/main i386 libglx-mesa0 i386 24.0.7-1 [158 kB] Get: 68 http://deb.debian.org/debian unstable/main i386 libglx0 i386 1.7.0-1+b1 [38.0 kB] Get: 69 http://deb.debian.org/debian unstable/main i386 libgl1 i386 1.7.0-1+b1 [82.7 kB] Get: 70 http://deb.debian.org/debian unstable/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 71 http://deb.debian.org/debian unstable/main i386 libharfbuzz0b i386 8.3.0-2+b1 [2234 kB] Get: 72 http://deb.debian.org/debian unstable/main i386 x11-common all 1:7.7+23 [252 kB] Get: 73 http://deb.debian.org/debian unstable/main i386 libice6 i386 2:1.0.10-1+b1 [58.6 kB] Get: 74 http://deb.debian.org/debian unstable/main i386 libevdev2 i386 1.13.1+dfsg-1+b1 [30.8 kB] Get: 75 http://deb.debian.org/debian unstable/main i386 libmtdev1t64 i386 1.1.6-1.2 [22.6 kB] Get: 76 http://deb.debian.org/debian unstable/main i386 libgudev-1.0-0 i386 238-5 [14.9 kB] Get: 77 http://deb.debian.org/debian unstable/main i386 libwacom-common all 2.10.0-2 [62.5 kB] Get: 78 http://deb.debian.org/debian unstable/main i386 libwacom9 i386 2.10.0-2 [23.8 kB] Get: 79 http://deb.debian.org/debian unstable/main i386 libinput-bin i386 1.25.0-1+b2 [25.2 kB] Get: 80 http://deb.debian.org/debian unstable/main i386 libinput10 i386 1.25.0-1+b2 [144 kB] Get: 81 http://deb.debian.org/debian unstable/main i386 libmd4c0 i386 0.4.8-1+b1 [45.2 kB] Get: 82 http://deb.debian.org/debian unstable/main i386 libdbus-1-3 i386 1.14.10-4+b1 [217 kB] Get: 83 http://deb.debian.org/debian unstable/main i386 libqt5dbus5t64 i386 5.15.10+dfsg-7.2+b1 [237 kB] Get: 84 http://deb.debian.org/debian unstable/main i386 libkrb5support0 i386 1.20.1-6+b1 [36.1 kB] Get: 85 http://deb.debian.org/debian unstable/main i386 libcom-err2 i386 1.47.1~rc2-1 [22.8 kB] Get: 86 http://deb.debian.org/debian unstable/main i386 libk5crypto3 i386 1.20.1-6+b1 [83.2 kB] Get: 87 http://deb.debian.org/debian unstable/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 88 http://deb.debian.org/debian unstable/main i386 libkrb5-3 i386 1.20.1-6+b1 [360 kB] Get: 89 http://deb.debian.org/debian unstable/main i386 libgssapi-krb5-2 i386 1.20.1-6+b1 [145 kB] Get: 90 http://deb.debian.org/debian unstable/main i386 libqt5network5t64 i386 5.15.10+dfsg-7.2+b1 [766 kB] Get: 91 http://deb.debian.org/debian unstable/main i386 libsm6 i386 2:1.2.3-1+b1 [33.9 kB] Get: 92 http://deb.debian.org/debian unstable/main i386 libxcb-icccm4 i386 0.4.1-1.1+b1 [27.5 kB] Get: 93 http://deb.debian.org/debian unstable/main i386 libxcb-util1 i386 0.4.0-1+b1 [23.6 kB] Get: 94 http://deb.debian.org/debian unstable/main i386 libxcb-image0 i386 0.4.0-2+b1 [22.8 kB] Get: 95 http://deb.debian.org/debian unstable/main i386 libxcb-keysyms1 i386 0.4.0-1+b2 [16.7 kB] Get: 96 http://deb.debian.org/debian unstable/main i386 libxcb-render0 i386 1.17.0-1 [115 kB] Get: 97 http://deb.debian.org/debian unstable/main i386 libxcb-render-util0 i386 0.3.9-1+b1 [18.7 kB] Get: 98 http://deb.debian.org/debian unstable/main i386 libxcb-shape0 i386 1.17.0-1 [105 kB] Get: 99 http://deb.debian.org/debian unstable/main i386 libxcb-xinerama0 i386 1.17.0-1 [105 kB] Get: 100 http://deb.debian.org/debian unstable/main i386 libxcb-xinput0 i386 1.17.0-1 [133 kB] Get: 101 http://deb.debian.org/debian unstable/main i386 libxcb-xkb1 i386 1.17.0-1 [131 kB] Get: 102 http://deb.debian.org/debian unstable/main i386 xkb-data all 2.41-2 [795 kB] Get: 103 http://deb.debian.org/debian unstable/main i386 libxkbcommon0 i386 1.6.0-1+b1 [115 kB] Get: 104 http://deb.debian.org/debian unstable/main i386 libxkbcommon-x11-0 i386 1.6.0-1+b1 [17.1 kB] Get: 105 http://deb.debian.org/debian unstable/main i386 libxrender1 i386 1:0.9.10-1.1+b1 [28.8 kB] Get: 106 http://deb.debian.org/debian unstable/main i386 libqt5gui5t64 i386 5.15.10+dfsg-7.2+b1 [5972 kB] Get: 107 http://deb.debian.org/debian unstable/main i386 libqt5positioning5 i386 5.15.10+dfsg-3+b2 [228 kB] Get: 108 http://deb.debian.org/debian unstable/main i386 libavahi-common-data i386 0.8-13+b2 [112 kB] Get: 109 http://deb.debian.org/debian unstable/main i386 libavahi-common3 i386 0.8-13+b2 [45.3 kB] Get: 110 http://deb.debian.org/debian unstable/main i386 libavahi-client3 i386 0.8-13+b2 [49.3 kB] Get: 111 http://deb.debian.org/debian unstable/main i386 libcups2t64 i386 2.4.7-1.2+b1 [264 kB] Get: 112 http://deb.debian.org/debian unstable/main i386 libqt5widgets5t64 i386 5.15.10+dfsg-7.2+b1 [2665 kB] Get: 113 http://deb.debian.org/debian unstable/main i386 libqt5printsupport5t64 i386 5.15.10+dfsg-7.2+b1 [221 kB] Get: 114 http://deb.debian.org/debian unstable/main i386 libqt5qml5 i386 5.15.10+dfsg-2+b2 [1482 kB] Get: 115 http://deb.debian.org/debian unstable/main i386 libqt5qmlmodels5 i386 5.15.10+dfsg-2+b2 [213 kB] Get: 116 http://deb.debian.org/debian unstable/main i386 libqt5quick5 i386 5.15.10+dfsg-2+b2 [1755 kB] Get: 117 http://deb.debian.org/debian unstable/main i386 libqt5sensors5 i386 5.15.10-2+b2 [122 kB] Get: 118 http://deb.debian.org/debian unstable/main i386 libqt5webchannel5 i386 5.15.10-2+b2 [64.7 kB] Get: 119 http://deb.debian.org/debian unstable/main i386 libsharpyuv0 i386 1.4.0-0.1 [113 kB] Get: 120 http://deb.debian.org/debian unstable/main i386 libwebp7 i386 1.4.0-0.1 [318 kB] Get: 121 http://deb.debian.org/debian unstable/main i386 libwoff1 i386 1.0.2-2+b1 [47.7 kB] Get: 122 http://deb.debian.org/debian unstable/main i386 libxslt1.1 i386 1.1.35-1+b1 [243 kB] Get: 123 http://deb.debian.org/debian unstable/main i386 libqt5webkit5 i386 5.212.0~alpha4-33+b3 [12.3 MB] Get: 124 http://deb.debian.org/debian unstable/main i386 libpython3.11-minimal i386 3.11.9-1 [817 kB] Get: 125 http://deb.debian.org/debian unstable/main i386 python3.11-minimal i386 3.11.9-1 [1918 kB] Get: 126 http://deb.debian.org/debian unstable/main i386 python3-minimal i386 3.11.8-1 [26.3 kB] Get: 127 http://deb.debian.org/debian unstable/main i386 media-types all 10.1.0 [26.9 kB] Get: 128 http://deb.debian.org/debian unstable/main i386 netbase all 6.4 [12.8 kB] Get: 129 http://deb.debian.org/debian unstable/main i386 tzdata all 2024a-4 [255 kB] Get: 130 http://deb.debian.org/debian unstable/main i386 readline-common all 8.2-4 [69.3 kB] Get: 131 http://deb.debian.org/debian unstable/main i386 libreadline8t64 i386 8.2-4 [171 kB] Get: 132 http://deb.debian.org/debian unstable/main i386 libpython3.11-stdlib i386 3.11.9-1 [1795 kB] Get: 133 http://deb.debian.org/debian unstable/main i386 python3.11 i386 3.11.9-1 [602 kB] Get: 134 http://deb.debian.org/debian unstable/main i386 libpython3-stdlib i386 3.11.8-1 [9336 B] Get: 135 http://deb.debian.org/debian unstable/main i386 python3 i386 3.11.8-1 [27.4 kB] Get: 136 http://deb.debian.org/debian unstable/main i386 libproc2-0 i386 2:4.0.4-4 [65.4 kB] Get: 137 http://deb.debian.org/debian unstable/main i386 procps i386 2:4.0.4-4 [876 kB] Get: 138 http://deb.debian.org/debian unstable/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 139 http://deb.debian.org/debian unstable/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 140 http://deb.debian.org/debian unstable/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 141 http://deb.debian.org/debian unstable/main i386 file i386 1:5.45-3 [42.9 kB] Get: 142 http://deb.debian.org/debian unstable/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 143 http://deb.debian.org/debian unstable/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 144 http://deb.debian.org/debian unstable/main i386 groff-base i386 1.23.0-4 [1194 kB] Get: 145 http://deb.debian.org/debian unstable/main i386 bsdextrautils i386 2.40.1-1 [98.5 kB] Get: 146 http://deb.debian.org/debian unstable/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 147 http://deb.debian.org/debian unstable/main i386 man-db i386 2.12.1-1 [1421 kB] Get: 148 http://deb.debian.org/debian unstable/main i386 m4 i386 1.4.19-4 [293 kB] Get: 149 http://deb.debian.org/debian unstable/main i386 autoconf all 2.71-3 [332 kB] Get: 150 http://deb.debian.org/debian unstable/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 151 http://deb.debian.org/debian unstable/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 152 http://deb.debian.org/debian unstable/main i386 autopoint all 0.21-14 [496 kB] Get: 153 http://deb.debian.org/debian unstable/main i386 libarchive13t64 i386 3.7.2-2 [387 kB] Get: 154 http://deb.debian.org/debian unstable/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-6 [20.5 kB] Get: 155 http://deb.debian.org/debian unstable/main i386 libsasl2-2 i386 2.1.28+dfsg1-6 [60.6 kB] Get: 156 http://deb.debian.org/debian unstable/main i386 libldap-2.5-0 i386 2.5.17+dfsg-1 [198 kB] Get: 157 http://deb.debian.org/debian unstable/main i386 libnghttp2-14 i386 1.61.0-1+b1 [84.0 kB] Get: 158 http://deb.debian.org/debian unstable/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get: 159 http://deb.debian.org/debian unstable/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get: 160 http://deb.debian.org/debian unstable/main i386 libssh2-1t64 i386 1.11.0-4.1+b2 [225 kB] Get: 161 http://deb.debian.org/debian unstable/main i386 libcurl4t64 i386 8.7.1-5 [478 kB] Get: 162 http://deb.debian.org/debian unstable/main i386 libjsoncpp25 i386 1.9.5-6+b2 [89.2 kB] Get: 163 http://deb.debian.org/debian unstable/main i386 librhash0 i386 1.4.3-3+b1 [143 kB] Get: 164 http://deb.debian.org/debian unstable/main i386 libuv1t64 i386 1.48.0-4 [156 kB] Get: 165 http://deb.debian.org/debian unstable/main i386 cmake-data all 3.29.3-1 [2167 kB] Get: 166 http://deb.debian.org/debian unstable/main i386 cmake i386 3.29.3-1+b2 [11.9 MB] Get: 167 http://deb.debian.org/debian unstable/main i386 comerr-dev i386 2.1-1.47.1~rc2-1 [54.7 kB] Get: 168 http://deb.debian.org/debian unstable/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 169 http://deb.debian.org/debian unstable/main i386 libtool all 2.4.7-7 [517 kB] Get: 170 http://deb.debian.org/debian unstable/main i386 dh-autoreconf all 20 [17.1 kB] Get: 171 http://deb.debian.org/debian unstable/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 172 http://deb.debian.org/debian unstable/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 173 http://deb.debian.org/debian unstable/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 174 http://deb.debian.org/debian unstable/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 175 http://deb.debian.org/debian unstable/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 176 http://deb.debian.org/debian unstable/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 177 http://deb.debian.org/debian unstable/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 178 http://deb.debian.org/debian unstable/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 179 http://deb.debian.org/debian unstable/main i386 debhelper all 13.15.3 [901 kB] Get: 180 http://deb.debian.org/debian unstable/main i386 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 181 http://deb.debian.org/debian unstable/main i386 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 182 http://deb.debian.org/debian unstable/main i386 python3-distutils all 3.12.3-1 [131 kB] Get: 183 http://deb.debian.org/debian unstable/main i386 python3-setuptools all 68.1.2-2 [468 kB] Get: 184 http://deb.debian.org/debian unstable/main i386 dh-python all 6.20240422 [107 kB] Get: 185 http://deb.debian.org/debian unstable/main i386 libllvm16t64 i386 1:16.0.6-27 [26.9 MB] Get: 186 http://deb.debian.org/debian unstable/main i386 libclang-cpp16t64 i386 1:16.0.6-27 [13.6 MB] Get: 187 http://deb.debian.org/debian unstable/main i386 libclang1-16t64 i386 1:16.0.6-27 [7735 kB] Get: 188 http://deb.debian.org/debian unstable/main i386 libfmt9 i386 9.1.0+ds1-2 [119 kB] Get: 189 http://deb.debian.org/debian unstable/main i386 doxygen i386 1.9.8+ds-2+b1 [5106 kB] Get: 190 http://deb.debian.org/debian unstable/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 191 http://deb.debian.org/debian unstable/main i386 libcdt5 i386 2.42.2-9+b1 [40.3 kB] Get: 192 http://deb.debian.org/debian unstable/main i386 libcgraph6 i386 2.42.2-9+b1 [67.5 kB] Get: 193 http://deb.debian.org/debian unstable/main i386 libaom3 i386 3.8.2-2 [1910 kB] Get: 194 http://deb.debian.org/debian unstable/main i386 libdav1d7 i386 1.4.1-1 [330 kB] Get: 195 http://deb.debian.org/debian unstable/main i386 libabsl20230802 i386 20230802.1-4 [521 kB] Get: 196 http://deb.debian.org/debian unstable/main i386 libgav1-1 i386 0.19.0-2+b1 [325 kB] Get: 197 http://deb.debian.org/debian unstable/main i386 librav1e0 i386 0.7.1-2 [650 kB] Get: 198 http://deb.debian.org/debian unstable/main i386 libyuv0 i386 0.0.1888.20240509-4 [108 kB] Get: 199 http://deb.debian.org/debian unstable/main i386 libavif16 i386 1.0.4-3 [113 kB] Get: 200 http://deb.debian.org/debian unstable/main i386 libheif-plugin-dav1d i386 1.17.6-1+b2 [10.2 kB] Get: 201 http://deb.debian.org/debian unstable/main i386 libde265-0 i386 1.0.15-1+b1 [195 kB] Get: 202 http://deb.debian.org/debian unstable/main i386 libheif-plugin-libde265 i386 1.17.6-1+b2 [13.7 kB] Get: 203 http://deb.debian.org/debian unstable/main i386 libheif1 i386 1.17.6-1+b2 [299 kB] Get: 204 http://deb.debian.org/debian unstable/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 205 http://deb.debian.org/debian unstable/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 206 http://deb.debian.org/debian unstable/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 207 http://deb.debian.org/debian unstable/main i386 libtiff6 i386 4.5.1+git230720-4 [338 kB] Get: 208 http://deb.debian.org/debian unstable/main i386 libxpm4 i386 1:3.5.17-1+b1 [57.8 kB] Get: 209 http://deb.debian.org/debian unstable/main i386 libgd3 i386 2.3.3-9+b3 [129 kB] Get: 210 http://deb.debian.org/debian unstable/main i386 libgts-0.7-5t64 i386 0.7.6+darcs121130-5.2 [158 kB] Get: 211 http://deb.debian.org/debian unstable/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 212 http://deb.debian.org/debian unstable/main i386 libcairo2 i386 1.18.0-3+b1 [588 kB] Get: 213 http://deb.debian.org/debian unstable/main i386 libltdl7 i386 2.4.7-7+b1 [395 kB] Get: 214 http://deb.debian.org/debian unstable/main i386 libfribidi0 i386 1.0.13-3+b1 [71.8 kB] Get: 215 http://deb.debian.org/debian unstable/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 216 http://deb.debian.org/debian unstable/main i386 libdatrie1 i386 0.2.13-3 [39.5 kB] Get: 217 http://deb.debian.org/debian unstable/main i386 libthai0 i386 0.1.29-2 [50.1 kB] Get: 218 http://deb.debian.org/debian unstable/main i386 libpango-1.0-0 i386 1.52.2+ds-1 [226 kB] Get: 219 http://deb.debian.org/debian unstable/main i386 libpangoft2-1.0-0 i386 1.52.2+ds-1 [51.2 kB] Get: 220 http://deb.debian.org/debian unstable/main i386 libpangocairo-1.0-0 i386 1.52.2+ds-1 [35.9 kB] Get: 221 http://deb.debian.org/debian unstable/main i386 libpathplan4 i386 2.42.2-9+b1 [42.4 kB] Get: 222 http://deb.debian.org/debian unstable/main i386 libgvc6 i386 2.42.2-9+b1 [712 kB] Get: 223 http://deb.debian.org/debian unstable/main i386 libgvpr2 i386 2.42.2-9+b1 [198 kB] Get: 224 http://deb.debian.org/debian unstable/main i386 liblab-gamut1 i386 2.42.2-9+b1 [198 kB] Get: 225 http://deb.debian.org/debian unstable/main i386 libxt6t64 i386 1:1.2.1-1.2 [193 kB] Get: 226 http://deb.debian.org/debian unstable/main i386 libxmu6 i386 2:1.1.3-3+b2 [60.5 kB] Get: 227 http://deb.debian.org/debian unstable/main i386 libxaw7 i386 2:1.0.14-1+b2 [208 kB] Get: 228 http://deb.debian.org/debian unstable/main i386 graphviz i386 2.42.2-9+b1 [576 kB] Get: 229 http://deb.debian.org/debian unstable/main i386 hdf5-helpers i386 1.10.10+repack-3.3 [23.4 kB] Get: 230 http://deb.debian.org/debian unstable/main i386 icu-devtools i386 72.1-4+b1 [216 kB] Get: 231 http://deb.debian.org/debian unstable/main i386 libattr1-dev i386 1:2.5.2-1 [36.2 kB] Get: 232 http://deb.debian.org/debian unstable/main i386 libacl1-dev i386 2.3.2-2 [95.7 kB] Get: 233 http://deb.debian.org/debian unstable/main i386 libaec0 i386 1.1.3-1 [24.5 kB] Get: 234 http://deb.debian.org/debian unstable/main i386 libsz2 i386 1.1.3-1 [7824 B] Get: 235 http://deb.debian.org/debian unstable/main i386 libaec-dev i386 1.1.3-1 [22.4 kB] Get: 236 http://deb.debian.org/debian unstable/main i386 libbz2-dev i386 1.0.8-5.1 [31.4 kB] Get: 237 http://deb.debian.org/debian unstable/main i386 liblz4-dev i386 1.9.4-2 [85.5 kB] Get: 238 http://deb.debian.org/debian unstable/main i386 liblzma-dev i386 5.6.1+really5.4.5-1 [304 kB] Get: 239 http://deb.debian.org/debian unstable/main i386 libicu-dev i386 72.1-4+b1 [10.6 MB] Get: 240 http://deb.debian.org/debian unstable/main i386 libxml2-dev i386 2.9.14+dfsg-1.3+b3 [849 kB] Get: 241 http://deb.debian.org/debian unstable/main i386 libzstd-dev i386 1.5.5+dfsg2-2 [346 kB] Get: 242 http://deb.debian.org/debian unstable/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1 [915 kB] Get: 243 http://deb.debian.org/debian unstable/main i386 libext2fs2t64 i386 1.47.1~rc2-1 [236 kB] Get: 244 http://deb.debian.org/debian unstable/main i386 libext2fs-dev i386 1.47.1~rc2-1 [325 kB] Get: 245 http://deb.debian.org/debian unstable/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-2+b1 [330 kB] Get: 246 http://deb.debian.org/debian unstable/main i386 libgmp-dev i386 2:6.3.0+dfsg-2+b1 [659 kB] Get: 247 http://deb.debian.org/debian unstable/main i386 nettle-dev i386 3.9.1-2.2 [1309 kB] Get: 248 http://deb.debian.org/debian unstable/main i386 libarchive-dev i386 3.7.2-2 [608 kB] Get: 249 http://deb.debian.org/debian unstable/main i386 libllvm15t64 i386 1:15.0.7-15 [26.5 MB] Get: 250 http://deb.debian.org/debian unstable/main i386 libclang1-15t64 i386 1:15.0.7-15 [7295 kB] Get: 251 http://deb.debian.org/debian unstable/main i386 libcurl4-openssl-dev i386 8.7.1-5 [600 kB] Get: 252 http://deb.debian.org/debian unstable/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 253 http://deb.debian.org/debian unstable/main i386 x11proto-dev all 2024.1-1 [603 kB] Get: 254 http://deb.debian.org/debian unstable/main i386 libxau-dev i386 1:1.0.9-1+b1 [21.6 kB] Get: 255 http://deb.debian.org/debian unstable/main i386 libxdmcp-dev i386 1:1.1.2-3+b1 [41.5 kB] Get: 256 http://deb.debian.org/debian unstable/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 257 http://deb.debian.org/debian unstable/main i386 libpthread-stubs0-dev i386 0.4-1+b1 [5320 B] Get: 258 http://deb.debian.org/debian unstable/main i386 libxcb1-dev i386 1.17.0-1 [185 kB] Get: 259 http://deb.debian.org/debian unstable/main i386 libx11-dev i386 2:1.8.7-1+b1 [904 kB] Get: 260 http://deb.debian.org/debian unstable/main i386 libglx-dev i386 1.7.0-1+b1 [15.8 kB] Get: 261 http://deb.debian.org/debian unstable/main i386 libgl-dev i386 1.7.0-1+b1 [101 kB] Get: 262 http://deb.debian.org/debian unstable/main i386 libegl-dev i386 1.7.0-1+b1 [19.5 kB] Get: 263 http://deb.debian.org/debian unstable/main i386 libpkgconf3 i386 1.8.1-1+b2 [38.5 kB] Get: 264 http://deb.debian.org/debian unstable/main i386 pkgconf-bin i386 1.8.1-1+b2 [30.2 kB] Get: 265 http://deb.debian.org/debian unstable/main i386 pkgconf i386 1.8.1-1+b2 [26.2 kB] Get: 266 http://deb.debian.org/debian unstable/main i386 pkg-config i386 1.8.1-1+b2 [14.0 kB] Get: 267 http://deb.debian.org/debian unstable/main i386 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 268 http://deb.debian.org/debian unstable/main i386 libexpat1-dev i386 2.6.2-1 [165 kB] Get: 269 http://deb.debian.org/debian unstable/main i386 libgfortran5 i386 14.1.0-1 [733 kB] Get: 270 http://deb.debian.org/debian unstable/main i386 libglvnd-core-dev i386 1.7.0-1+b1 [13.4 kB] Get: 271 http://deb.debian.org/debian unstable/main i386 libgles1 i386 1.7.0-1+b1 [12.0 kB] Get: 272 http://deb.debian.org/debian unstable/main i386 libgles2 i386 1.7.0-1+b1 [16.8 kB] Get: 273 http://deb.debian.org/debian unstable/main i386 libgles-dev i386 1.7.0-1+b1 [50.8 kB] Get: 274 http://deb.debian.org/debian unstable/main i386 libopengl0 i386 1.7.0-1+b1 [29.5 kB] Get: 275 http://deb.debian.org/debian unstable/main i386 libopengl-dev i386 1.7.0-1+b1 [5368 B] Get: 276 http://deb.debian.org/debian unstable/main i386 libglvnd-dev i386 1.7.0-1+b1 [5140 B] Get: 277 http://deb.debian.org/debian unstable/main i386 libgl1-mesa-dev i386 24.0.7-1 [17.1 kB] Get: 278 http://deb.debian.org/debian unstable/main i386 libgl2ps1.4 i386 1.4.2+dfsg1-2 [42.0 kB] Get: 279 http://deb.debian.org/debian unstable/main i386 libgl2ps-dev i386 1.4.2+dfsg1-2 [24.8 kB] Get: 280 http://deb.debian.org/debian unstable/main i386 libglew2.2 i386 2.2.0-4+b1 [168 kB] Get: 281 http://deb.debian.org/debian unstable/main i386 libglu1-mesa i386 9.0.2-1.1+b1 [187 kB] Get: 282 http://deb.debian.org/debian unstable/main i386 libglu1-mesa-dev i386 9.0.2-1.1+b1 [230 kB] Get: 283 http://deb.debian.org/debian unstable/main i386 libglew-dev i386 2.2.0-4+b1 [264 kB] Get: 284 http://deb.debian.org/debian unstable/main i386 libhdf5-103-1t64 i386 1.10.10+repack-3.3 [1178 kB] Get: 285 http://deb.debian.org/debian unstable/main i386 libhdf5-cpp-103-1t64 i386 1.10.10+repack-3.3 [138 kB] Get: 286 http://deb.debian.org/debian unstable/main i386 libhdf5-fortran-102t64 i386 1.10.10+repack-3.3 [98.2 kB] Get: 287 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-100t64 i386 1.10.10+repack-3.3 [74.4 kB] Get: 288 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-fortran-100t64 i386 1.10.10+repack-3.3 [41.8 kB] Get: 289 http://deb.debian.org/debian unstable/main i386 libhdf5-hl-cpp-100t64 i386 1.10.10+repack-3.3 [21.8 kB] Get: 290 http://deb.debian.org/debian unstable/main i386 libjpeg62-turbo-dev i386 1:2.1.5-3 [303 kB] Get: 291 http://deb.debian.org/debian unstable/main i386 libjpeg-dev i386 1:2.1.5-3 [71.9 kB] Get: 292 http://deb.debian.org/debian unstable/main i386 libssl-dev i386 3.2.1-3 [2744 kB] Get: 293 http://deb.debian.org/debian unstable/main i386 libhdf5-dev i386 1.10.10+repack-3.3 [2772 kB] Get: 294 http://deb.debian.org/debian unstable/main i386 libinchi1 i386 1.03+dfsg-4 [423 kB] Get: 295 http://deb.debian.org/debian unstable/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 296 http://deb.debian.org/debian unstable/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 297 http://deb.debian.org/debian unstable/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 298 http://deb.debian.org/debian unstable/main i386 libjs-sphinxdoc all 7.2.6-7 [150 kB] Get: 299 http://deb.debian.org/debian unstable/main i386 libmaeparser1 i386 1.3.1-1+b1 [99.9 kB] Get: 300 http://deb.debian.org/debian unstable/main i386 libmolequeue-dev i386 0.9.0-1+b1 [75.5 kB] Get: 301 http://deb.debian.org/debian unstable/main i386 libopenbabel7 i386 3.1.1+dfsg-9+b8 [3297 kB] Get: 302 http://deb.debian.org/debian unstable/main i386 libpython3.11t64 i386 3.11.9-1 [1982 kB] Get: 303 http://deb.debian.org/debian unstable/main i386 libpython3.11-dev i386 3.11.9-1 [4632 kB] Get: 304 http://deb.debian.org/debian unstable/main i386 libpython3-dev i386 3.11.8-1 [9600 B] Get: 305 http://deb.debian.org/debian unstable/main i386 libqt5concurrent5t64 i386 5.15.10+dfsg-7.2+b1 [44.6 kB] Get: 306 http://deb.debian.org/debian unstable/main i386 libqt5xml5t64 i386 5.15.10+dfsg-7.2+b1 [135 kB] Get: 307 http://deb.debian.org/debian unstable/main i386 libqt5designer5 i386 5.15.10-7 [2866 kB] Get: 308 http://deb.debian.org/debian unstable/main i386 libqt5designercomponents5 i386 5.15.10-7 [817 kB] Get: 309 http://deb.debian.org/debian unstable/main i386 libqt5sql5t64 i386 5.15.10+dfsg-7.2+b1 [135 kB] Get: 310 http://deb.debian.org/debian unstable/main i386 libqt5help5 i386 5.15.10-7 [170 kB] Get: 311 http://deb.debian.org/debian unstable/main i386 libqt5opengl5t64 i386 5.15.10+dfsg-7.2+b1 [163 kB] Get: 312 http://deb.debian.org/debian unstable/main i386 libqt5test5t64 i386 5.15.10+dfsg-7.2+b1 [154 kB] Get: 313 http://deb.debian.org/debian unstable/main i386 libvulkan-dev i386 1.3.280.0-1 [1348 kB] Get: 314 http://deb.debian.org/debian unstable/main i386 libxext-dev i386 2:1.3.4-1+b1 [110 kB] Get: 315 http://deb.debian.org/debian unstable/main i386 qt5-qmake-bin i386 5.15.10+dfsg-7.2+b1 [1123 kB] Get: 316 http://deb.debian.org/debian unstable/main i386 qtchooser i386 66-2 [27.8 kB] Get: 317 http://deb.debian.org/debian unstable/main i386 qt5-qmake i386 5.15.10+dfsg-7.2+b1 [223 kB] Get: 318 http://deb.debian.org/debian unstable/main i386 qtbase5-dev-tools i386 5.15.10+dfsg-7.2+b1 [849 kB] Get: 319 http://deb.debian.org/debian unstable/main i386 qtbase5-dev i386 5.15.10+dfsg-7.2+b1 [1124 kB] Get: 320 http://deb.debian.org/debian unstable/main i386 libqt5opengl5-dev i386 5.15.10+dfsg-7.2+b1 [50.6 kB] Get: 321 http://deb.debian.org/debian unstable/main i386 libqt5quickwidgets5 i386 5.15.10+dfsg-2+b2 [42.7 kB] Get: 322 http://deb.debian.org/debian unstable/main i386 libqt5sql5-sqlite i386 5.15.10+dfsg-7.2+b1 [61.0 kB] Get: 323 http://deb.debian.org/debian unstable/main i386 libqt5svg5 i386 5.15.10-2+b2 [151 kB] Get: 324 http://deb.debian.org/debian unstable/main i386 libqt5svg5-dev i386 5.15.10-2+b2 [13.1 kB] Get: 325 http://deb.debian.org/debian unstable/main i386 libsymspg2 i386 2.4.0-1 [202 kB] Get: 326 http://deb.debian.org/debian unstable/main i386 libsymspg-dev i386 2.4.0-1 [36.3 kB] Get: 327 http://deb.debian.org/debian unstable/main i386 lsb-release all 12.0-2 [6564 B] Get: 328 http://deb.debian.org/debian unstable/main i386 molequeue i386 0.9.0-1+b1 [514 kB] Get: 329 http://deb.debian.org/debian unstable/main i386 openbabel i386 3.1.1+dfsg-9+b8 [131 kB] Get: 330 http://deb.debian.org/debian unstable/main i386 pybind11-dev all 2.11.1-2 [191 kB] Get: 331 http://deb.debian.org/debian unstable/main i386 python3.11-dev i386 3.11.9-1 [501 kB] Get: 332 http://deb.debian.org/debian unstable/main i386 python3-dev i386 3.11.8-1 [26.1 kB] Get: 333 http://deb.debian.org/debian unstable/main i386 python3-distro all 1.9.0-1 [20.3 kB] Get: 334 http://deb.debian.org/debian unstable/main i386 python3-packaging all 24.0-1 [45.5 kB] Get: 335 http://deb.debian.org/debian unstable/main i386 python3-pybind11 all 2.11.1-2 [201 kB] Get: 336 http://deb.debian.org/debian unstable/main i386 python3-wheel all 0.43.0-1 [52.5 kB] Get: 337 http://deb.debian.org/debian unstable/main i386 python3-skbuild all 0.17.6-2 [74.6 kB] Get: 338 http://deb.debian.org/debian unstable/main i386 qdoc-qt5 i386 5.15.10-7 [669 kB] Get: 339 http://deb.debian.org/debian unstable/main i386 qhelpgenerator-qt5 i386 5.15.10-7 [67.3 kB] Get: 340 http://deb.debian.org/debian unstable/main i386 qt5-assistant i386 5.15.10-7 [375 kB] Get: 341 http://deb.debian.org/debian unstable/main i386 qtattributionsscanner-qt5 i386 5.15.10-7 [33.6 kB] Get: 342 http://deb.debian.org/debian unstable/main i386 qttools5-dev-tools i386 5.15.10-7 [1146 kB] Get: 343 http://deb.debian.org/debian unstable/main i386 qttools5-dev i386 5.15.10-7 [210 kB] Fetched 299 MB in 3s (95.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libglib2.0-0t64:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19704 files and directories currently installed.) Preparing to unpack .../000-libglib2.0-0t64_2.80.2-1_i386.deb ... Unpacking libglib2.0-0t64:i386 (2.80.2-1) ... Selecting previously unselected package libdrm-common. Preparing to unpack .../001-libdrm-common_2.4.120-2_all.deb ... Unpacking libdrm-common (2.4.120-2) ... Selecting previously unselected package libdrm2:i386. Preparing to unpack .../002-libdrm2_2.4.120-2_i386.deb ... Unpacking libdrm2:i386 (2.4.120-2) ... Selecting previously unselected package libelf1t64:i386. Preparing to unpack .../003-libelf1t64_0.191-1+b1_i386.deb ... Unpacking libelf1t64:i386 (0.191-1+b1) ... Selecting previously unselected package libdw1t64:i386. Preparing to unpack .../004-libdw1t64_0.191-1+b1_i386.deb ... Unpacking libdw1t64:i386 (0.191-1+b1) ... Selecting previously unselected package libunwind8:i386. Preparing to unpack .../005-libunwind8_1.6.2-3+b1_i386.deb ... Unpacking libunwind8:i386 (1.6.2-3+b1) ... Selecting previously unselected package libcap2-bin. Preparing to unpack .../006-libcap2-bin_1%3a2.66-5_i386.deb ... Unpacking libcap2-bin (1:2.66-5) ... Selecting previously unselected package libgstreamer1.0-0:i386. Preparing to unpack .../007-libgstreamer1.0-0_1.24.3-1_i386.deb ... Unpacking libgstreamer1.0-0:i386 (1.24.3-1) ... Selecting previously unselected package liborc-0.4-0t64:i386. Preparing to unpack .../008-liborc-0.4-0t64_1%3a0.4.38-1_i386.deb ... 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Adding 'diversion of /lib/i386-linux-gnu/libe2p.so.2 to /lib/i386-linux-gnu/libe2p.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/i386-linux-gnu/libe2p.so.2.3 to /lib/i386-linux-gnu/libe2p.so.2.3.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/i386-linux-gnu/libext2fs.so.2 to /lib/i386-linux-gnu/libext2fs.so.2.usr-is-merged by libext2fs2t64' Adding 'diversion of /lib/i386-linux-gnu/libext2fs.so.2.4 to /lib/i386-linux-gnu/libext2fs.so.2.4.usr-is-merged by libext2fs2t64' Unpacking libext2fs2t64:i386 (1.47.1~rc2-1) ... Selecting previously unselected package libext2fs-dev. Preparing to unpack .../109-libext2fs-dev_1.47.1~rc2-1_i386.deb ... Unpacking libext2fs-dev (1.47.1~rc2-1) ... Selecting previously unselected package libgmpxx4ldbl:i386. Preparing to unpack .../110-libgmpxx4ldbl_2%3a6.3.0+dfsg-2+b1_i386.deb ... Unpacking libgmpxx4ldbl:i386 (2:6.3.0+dfsg-2+b1) ... Selecting previously unselected package libgmp-dev:i386. 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Setting up libgbm1:i386 (24.0.7-1) ... Setting up libdrm-radeon1:i386 (2.4.120-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:i386 (3.11.9-1) ... Setting up libpango-1.0-0:i386 (1.52.2+ds-1) ... Setting up libdrm-intel1:i386 (2.4.120-2) ... Setting up libgl1-mesa-dri:i386 (24.0.7-1) ... Setting up libpython3.11t64:i386 (3.11.9-1) ... Setting up libx11-dev:i386 (2:1.8.7-1+b1) ... Setting up libxext6:i386 (2:1.3.4-1+b1) ... Setting up libgstreamer-plugins-base1.0-0:i386 (1.24.3-1) ... Setting up libclang1-16t64 (1:16.0.6-27) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libclang-cpp16t64 (1:16.0.6-27) ... Setting up libcairo2:i386 (1.18.0-3+b1) ... Setting up libxxf86vm1:i386 (1:1.1.4-1+b2) ... Setting up libqt5core5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libegl-mesa0:i386 (24.0.7-1) ... Setting up doxygen (1.9.8+ds-2+b1) ... Setting up libxfixes3:i386 (1:6.0.0-2+b1) ... Setting up libcurl4-openssl-dev:i386 (8.7.1-5) ... Setting up libpython3.11-dev:i386 (3.11.9-1) ... Setting up libxt6t64:i386 (1:1.2.1-1.2) ... Setting up qtattributionsscanner-qt5 (5.15.10-7) ... Setting up libclang1-15t64 (1:15.0.7-15) ... Setting up libxext-dev:i386 (2:1.3.4-1+b1) ... Setting up libarchive-dev:i386 (3.7.2-2) ... Setting up libegl1:i386 (1.7.0-1+b1) ... Setting up libqt5sql5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up cmake (3.29.3-1+b2) ... Setting up libpangoft2-1.0-0:i386 (1.52.2+ds-1) ... Setting up libhdf5-103-1t64:i386 (1.10.10+repack-3.3) ... Setting up libcups2t64:i386 (2.4.7-1.2+b1) ... Setting up libpangocairo-1.0-0:i386 (1.52.2+ds-1) ... Setting up libpython3-stdlib:i386 (3.11.8-1) ... Setting up libhdf5-hl-100t64:i386 (1.10.10+repack-3.3) ... Setting up python3.11 (3.11.9-1) ... Setting up libxmu6:i386 (2:1.1.3-3+b2) ... Setting up libqt5dbus5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libglx-mesa0:i386 (24.0.7-1) ... Setting up libpython3-dev:i386 (3.11.8-1) ... Setting up libqt5sql5-sqlite:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libglx0:i386 (1.7.0-1+b1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up qdoc-qt5 (5.15.10-7) ... Setting up libqt5concurrent5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libqt5positioning5:i386 (5.15.10+dfsg-3+b2) ... Setting up libhdf5-cpp-103-1t64:i386 (1.10.10+repack-3.3) ... Setting up libqt5network5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libhdf5-fortran-102t64:i386 (1.10.10+repack-3.3) ... Setting up libqt5xml5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up libopenbabel7 (3.1.1+dfsg-9+b8) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libxaw7:i386 (2:1.0.14-1+b2) ... Setting up libqt5test5t64:i386 (5.15.10+dfsg-7.2+b1) ... Setting up python3-wheel (0.43.0-1) ... Setting up pybind11-dev (2.11.1-2) ... Setting up qtbase5-dev-tools (5.15.10+dfsg-7.2+b1) ... Setting up python3-packaging (24.0-1) ... Setting up libgl1:i386 (1.7.0-1+b1) ... Setting up libqt5qml5:i386 (5.15.10+dfsg-2+b2) ... Setting up libqt5webchannel5:i386 (5.15.10-2+b2) ... Setting up libglew2.2:i386 (2.2.0-4+b1) ... Setting up libglx-dev:i386 (1.7.0-1+b1) ... Setting up libqt5sensors5:i386 (5.15.10-2+b2) ... Setting up libhdf5-hl-cpp-100t64:i386 (1.10.10+repack-3.3) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up libgl-dev:i386 (1.7.0-1+b1) ... Setting up python3-pybind11 (2.11.1-2) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... Setting up libvulkan-dev:i386 (1.3.280.0-1) ... Setting up libqt5qmlmodels5:i386 (5.15.10+dfsg-2+b2) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-distro (1.9.0-1) ... Setting up libegl-dev:i386 (1.7.0-1+b1) ... Setting up python3-skbuild (0.17.6-2) ... Setting up openbabel (3.1.1+dfsg-9+b8) ... Setting up libhdf5-hl-fortran-100t64:i386 (1.10.10+repack-3.3) ... Setting up libgl2ps1.4 (1.4.2+dfsg1-2) ... 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Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.34-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/avogadrolibs-1.99.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../avogadrolibs_1.99.0-5_source.changes dpkg-buildpackage: info: source package avogadrolibs dpkg-buildpackage: info: source version 1.99.0-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --with python3 --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build dh build --with python3 --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0' dh_auto_configure -- -DUSE_HDF5=ON -DUSE_LIBMSYM=OFF -DUSE_MMTF=OFF -DOpenGL_GL_PREFERENCE=GLVND -DCMAKE_SKIP_RPATH=TRUE -DUSE_PYTHON=ON -DUSE_VTK=OFF -DENABLE_TRANSLATIONS=ON -DUSE_QT_OPENGL=ON cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DUSE_HDF5=ON -DUSE_LIBMSYM=OFF -DUSE_MMTF=OFF -DOpenGL_GL_PREFERENCE=GLVND -DCMAKE_SKIP_RPATH=TRUE -DUSE_PYTHON=ON -DUSE_VTK=OFF -DENABLE_TRANSLATIONS=ON -DUSE_QT_OPENGL=ON .. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAVE_GCC_ERROR_RETURN_TYPE -- Performing Test HAVE_GCC_ERROR_RETURN_TYPE - Success -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Could not use git to determine source version, using version 1.99.0 -- Found Eigen3: /usr/include/eigen3 -- Found SPGLIB: /usr/include -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Found HDF5: /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libpthread.a;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so (found version "1.10.10") found components: C -- Found OpenGL: /usr/lib/i386-linux-gnu/libOpenGL.so -- Found GLEW: /usr/include (found version "2.2.0") CMake Warning (dev) at avogadro/qtgui/CMakeLists.txt:22 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.11.9", minimum required is "3") Avogadro Generators not found at /build/reproducible-path/avogadrolibs-1.99.0/../avogadrogenerators! -- Found LibArchive: /usr/lib/i386-linux-gnu/libarchive.so (found version "3.7.2") CMake Deprecation Warning at python/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found Python: /usr/bin/python3 (found version "3.11.9") found components: Interpreter Development Development.Module Development.Embed -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.11.1") -- Configuring done (5.0s) -- Generating done (0.3s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu make[1]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0' debian/rules override_dh_auto_configure-indep make[1]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0' dh_auto_configure -- -DBUILD_DOCUMENTATION=ON -DUSE_HDF5=ON -DUSE_LIBMSYM=OFF -DUSE_MMTF=OFF -DOpenGL_GL_PREFERENCE=GLVND -DCMAKE_SKIP_RPATH=TRUE -DUSE_PYTHON=ON -DUSE_VTK=OFF -DENABLE_TRANSLATIONS=ON -DUSE_QT_OPENGL=ON cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DBUILD_DOCUMENTATION=ON -DUSE_HDF5=ON -DUSE_LIBMSYM=OFF -DUSE_MMTF=OFF -DOpenGL_GL_PREFERENCE=GLVND -DCMAKE_SKIP_RPATH=TRUE -DUSE_PYTHON=ON -DUSE_VTK=OFF -DENABLE_TRANSLATIONS=ON -DUSE_QT_OPENGL=ON .. -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Could not use git to determine source version, using version 1.99.0 CMake Warning (dev) at avogadro/qtgui/CMakeLists.txt:22 (find_package): Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules are removed. Run "cmake --help-policy CMP0148" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. Avogadro Generators not found at /build/reproducible-path/avogadrolibs-1.99.0/../avogadrogenerators! -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot CMake Deprecation Warning at python/CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- Found pybind11: /usr/include (found version "2.11.1") -- Configuring done (0.7s) -- Generating done (0.8s) -- Build files have been written to: /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu make[1]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0' dh_auto_build -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j6 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/avogadrolibs-1.99.0 -B/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f thirdparty/CMakeFiles/pugixml.dir/build.make thirdparty/CMakeFiles/pugixml.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/thirdparty /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty/CMakeFiles/pugixml.dir/DependInfo.cmake "--color=" make -f thirdparty/CMakeFiles/struct.dir/build.make thirdparty/CMakeFiles/struct.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/thirdparty /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty/CMakeFiles/struct.dir/DependInfo.cmake "--color=" make -f thirdparty/libgwavi/CMakeFiles/gwavi.dir/build.make thirdparty/libgwavi/CMakeFiles/gwavi.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty/libgwavi /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty/libgwavi/CMakeFiles/gwavi.dir/DependInfo.cmake "--color=" make -f avogadro/core/CMakeFiles/Headers.dir/build.make avogadro/core/CMakeFiles/Headers.dir/depend make -f utilities/encodefile/CMakeFiles/encodefile.dir/build.make utilities/encodefile/CMakeFiles/encodefile.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core 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C object thirdparty/CMakeFiles/struct.dir/struct/struct_endian.c.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty && /usr/bin/cc -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -MD -MT thirdparty/CMakeFiles/struct.dir/struct/struct_endian.c.o -MF CMakeFiles/struct.dir/struct/struct_endian.c.o.d -o CMakeFiles/struct.dir/struct/struct_endian.c.o -c /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct/struct_endian.c cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty/libgwavi && /usr/bin/cc -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -Werror=implicit-function-declaration 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object avogadro/core/CMakeFiles/Core.dir/angleiterator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/angleiterator.cpp.o -MF CMakeFiles/Core.dir/angleiterator.cpp.o.d -o CMakeFiles/Core.dir/angleiterator.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/angleiterator.cpp [ 1%] Building C object thirdparty/libgwavi/CMakeFiles/gwavi.dir/fileio.c.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty/libgwavi && /usr/bin/cc -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -MD -MT thirdparty/libgwavi/CMakeFiles/gwavi.dir/fileio.c.o -MF CMakeFiles/gwavi.dir/fileio.c.o.d -o CMakeFiles/gwavi.dir/fileio.c.o -c /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi/fileio.c [ 1%] Building C object thirdparty/libgwavi/CMakeFiles/gwavi.dir/avi-utils.c.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty/libgwavi && /usr/bin/cc -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fPIC -MD -MT thirdparty/libgwavi/CMakeFiles/gwavi.dir/avi-utils.c.o -MF CMakeFiles/gwavi.dir/avi-utils.c.o.d -o CMakeFiles/gwavi.dir/avi-utils.c.o -c /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi/avi-utils.c [ 2%] Linking C static library libstruct.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty && /usr/bin/cmake -P CMakeFiles/struct.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty && /usr/bin/cmake -E cmake_link_script CMakeFiles/struct.dir/link.txt --verbose=1 /usr/bin/ar qc libstruct.a CMakeFiles/struct.dir/struct/struct.c.o 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-D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed CMakeFiles/encodefile.dir/encodefile.cxx.o -o ../../bin/encodefile /usr/bin/ranlib libgwavi.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 2%] Built target gwavi [ 2%] Building CXX object avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o -MF CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o.d -o CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 2%] Built target encodefile [ 2%] Building CXX object avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o -MF CMakeFiles/Core.dir/crystaltools.cpp.o.d -o CMakeFiles/Core.dir/crystaltools.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.cpp [ 2%] Linking CXX executable ../../bin/resdataparse cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/utilities/resdata && 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object avogadro/core/CMakeFiles/Core.dir/graph.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/graph.cpp.o -MF CMakeFiles/Core.dir/graph.cpp.o.d -o CMakeFiles/Core.dir/graph.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/graph.cpp [ 3%] 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CMakeFiles/Core.dir/molecule.cpp.o.d -o CMakeFiles/Core.dir/molecule.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.cpp [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/mutex.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/mutex.cpp.o -MF CMakeFiles/Core.dir/mutex.cpp.o.d -o CMakeFiles/Core.dir/mutex.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/mutex.cpp [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/nameatomtyper.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden 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-D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/neighborperceiver.cpp.o -MF CMakeFiles/Core.dir/neighborperceiver.cpp.o.d -o CMakeFiles/Core.dir/neighborperceiver.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.cpp [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/residue.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/residue.cpp.o -MF CMakeFiles/Core.dir/residue.cpp.o.d -o CMakeFiles/Core.dir/residue.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.cpp [ 4%] Linking CXX static library libpugixml.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty && /usr/bin/cmake -P CMakeFiles/pugixml.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/thirdparty && /usr/bin/cmake -E cmake_link_script CMakeFiles/pugixml.dir/link.txt --verbose=1 /usr/bin/ar qc libpugixml.a CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o /usr/bin/ranlib libpugixml.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 4%] Built target pugixml make -f 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CXX object utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/utilities/bodr && /usr/bin/c++ -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o -MF CMakeFiles/bodrparse.dir/bodrparse.cxx.o.d -o CMakeFiles/bodrparse.dir/bodrparse.cxx.o -c /build/reproducible-path/avogadrolibs-1.99.0/utilities/bodr/bodrparse.cxx [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/ringperceiver.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/ringperceiver.cpp.o -MF CMakeFiles/Core.dir/ringperceiver.cpp.o.d -o CMakeFiles/Core.dir/ringperceiver.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ringperceiver.cpp [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/secondarystructure.cpp.o cd 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CXX object avogadro/core/CMakeFiles/Core.dir/slaterset.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/slaterset.cpp.o -MF CMakeFiles/Core.dir/slaterset.cpp.o.d -o CMakeFiles/Core.dir/slaterset.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.cpp [ 5%] Linking CXX executable ../../bin/bodrparse cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/utilities/bodr && /usr/bin/cmake -E cmake_link_script CMakeFiles/bodrparse.dir/link.txt --verbose=1 /usr/bin/c++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed CMakeFiles/bodrparse.dir/bodrparse.cxx.o -o ../../bin/bodrparse ../../thirdparty/libpugixml.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 5%] Built target bodrparse [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/slatersettools.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/slatersettools.cpp.o -MF CMakeFiles/Core.dir/slatersettools.cpp.o.d -o CMakeFiles/Core.dir/slatersettools.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slatersettools.cpp [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/spacegroups.cpp.o cd 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avogadro/core/CMakeFiles/Core.dir/symbolatomtyper.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/symbolatomtyper.cpp.o -MF CMakeFiles/Core.dir/symbolatomtyper.cpp.o.d -o CMakeFiles/Core.dir/symbolatomtyper.cpp.o -c 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CMakeFiles/Core.dir/unitcell.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.cpp [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/variantmap.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/variantmap.cpp.o -MF CMakeFiles/Core.dir/variantmap.cpp.o.d -o CMakeFiles/Core.dir/variantmap.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variantmap.cpp [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/version.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/version.cpp.o -MF CMakeFiles/Core.dir/version.cpp.o.d -o CMakeFiles/Core.dir/version.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/version.cpp [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/sharedmutex.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/sharedmutex.cpp.o -MF CMakeFiles/Core.dir/sharedmutex.cpp.o.d -o CMakeFiles/Core.dir/sharedmutex.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/sharedmutex.cpp [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/avospglib.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/c++ -DCore_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/avospglib.cpp.o -MF CMakeFiles/Core.dir/avospglib.cpp.o.d -o CMakeFiles/Core.dir/avospglib.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/avospglib.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.cpp: In function 'void __static_initialization_and_destruction_0()': /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.cpp:162:1: note: variable tracking size limit exceeded with '-fvar-tracking-assignments', retrying without 162 | } // namespace Avogadro | ^ [ 6%] Linking CXX shared library ../../lib/libAvogadroCore.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/cmake -E cmake_link_script CMakeFiles/Core.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libAvogadroCore.so.1 -o ../../lib/libAvogadroCore.so.1.99.0 CMakeFiles/Core.dir/angleiterator.cpp.o CMakeFiles/Core.dir/atomutilities.cpp.o CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o CMakeFiles/Core.dir/crystaltools.cpp.o CMakeFiles/Core.dir/cube.cpp.o CMakeFiles/Core.dir/elements.cpp.o CMakeFiles/Core.dir/dihedraliterator.cpp.o CMakeFiles/Core.dir/gaussianset.cpp.o CMakeFiles/Core.dir/gaussiansettools.cpp.o CMakeFiles/Core.dir/graph.cpp.o CMakeFiles/Core.dir/layer.cpp.o CMakeFiles/Core.dir/layermanager.cpp.o CMakeFiles/Core.dir/mesh.cpp.o CMakeFiles/Core.dir/molecule.cpp.o CMakeFiles/Core.dir/mutex.cpp.o CMakeFiles/Core.dir/nameatomtyper.cpp.o CMakeFiles/Core.dir/neighborperceiver.cpp.o CMakeFiles/Core.dir/residue.cpp.o CMakeFiles/Core.dir/ringperceiver.cpp.o CMakeFiles/Core.dir/secondarystructure.cpp.o CMakeFiles/Core.dir/slaterset.cpp.o CMakeFiles/Core.dir/slatersettools.cpp.o CMakeFiles/Core.dir/spacegroups.cpp.o CMakeFiles/Core.dir/symbolatomtyper.cpp.o CMakeFiles/Core.dir/unitcell.cpp.o CMakeFiles/Core.dir/variantmap.cpp.o CMakeFiles/Core.dir/version.cpp.o CMakeFiles/Core.dir/sharedmutex.cpp.o CMakeFiles/Core.dir/avospglib.cpp.o /usr/lib/i386-linux-gnu/libsymspg.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroCore.so.1.99.0 ../../lib/libAvogadroCore.so.1 ../../lib/libAvogadroCore.so make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 6%] Built target Core make -f avogadro/calc/CMakeFiles/Calc.dir/build.make avogadro/calc/CMakeFiles/Calc.dir/depend make -f avogadro/io/CMakeFiles/IO.dir/build.make avogadro/io/CMakeFiles/IO.dir/depend make -f avogadro/rendering/CMakeFiles/Rendering.dir/build.make avogadro/rendering/CMakeFiles/Rendering.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc/CMakeFiles/Calc.dir/DependInfo.cmake "--color=" make -f python/CMakeFiles/avogadrocorepython.dir/build.make python/CMakeFiles/avogadrocorepython.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" 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/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering/sphere_ao_depth_vs.h sphere_ao_depth_vs [ 10%] Encoding /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/sphere_ao_render_fs.glsl cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && ../../bin/encodefile /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/sphere_ao_render_fs.glsl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering/sphere_ao_render_fs.h sphere_ao_render_fs [ 10%] Encoding /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/sphere_ao_render_vs.glsl cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && ../../bin/encodefile /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/sphere_ao_render_vs.glsl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering/sphere_ao_render_vs.h sphere_ao_render_vs [ 10%] Encoding /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheres_fs.glsl cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && ../../bin/encodefile /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheres_fs.glsl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering/spheres_fs.h spheres_fs [ 10%] Encoding /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheres_vs.glsl cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && ../../bin/encodefile /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheres_vs.glsl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering/spheres_vs.h spheres_vs [ 10%] Encoding /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase_fs.glsl cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && ../../bin/encodefile /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase_fs.glsl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering/textlabelbase_fs.h textlabelbase_fs cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering/CMakeFiles/Rendering.dir/DependInfo.cmake "--color=" [ 10%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/chargemanager.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc && /usr/bin/c++ -DCalc_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/chargemanager.cpp.o -MF CMakeFiles/Calc.dir/chargemanager.cpp.o.d -o CMakeFiles/Calc.dir/chargemanager.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemanager.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/rendering/CMakeFiles/Rendering.dir/build.make avogadro/rendering/CMakeFiles/Rendering.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 10%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/arcsector.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/arcsector.cpp.o -MF CMakeFiles/Rendering.dir/arcsector.cpp.o.d -o CMakeFiles/Rendering.dir/arcsector.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arcsector.cpp [ 10%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/defaultmodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc && /usr/bin/c++ -DCalc_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/defaultmodel.cpp.o -MF CMakeFiles/Calc.dir/defaultmodel.cpp.o.d -o CMakeFiles/Calc.dir/defaultmodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/defaultmodel.cpp [ 11%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/arcstrip.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/arcstrip.cpp.o -MF CMakeFiles/Rendering.dir/arcstrip.cpp.o.d -o CMakeFiles/Rendering.dir/arcstrip.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arcstrip.cpp [ 11%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/energycalculator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc && /usr/bin/c++ -DCalc_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/energycalculator.cpp.o -MF CMakeFiles/Calc.dir/energycalculator.cpp.o.d -o CMakeFiles/Calc.dir/energycalculator.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energycalculator.cpp [ 11%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/energymanager.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc && /usr/bin/c++ -DCalc_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/energymanager.cpp.o -MF CMakeFiles/Calc.dir/energymanager.cpp.o.d -o CMakeFiles/Calc.dir/energymanager.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energymanager.cpp [ 11%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/arrowgeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/arrowgeometry.cpp.o -MF CMakeFiles/Rendering.dir/arrowgeometry.cpp.o.d -o CMakeFiles/Rendering.dir/arrowgeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arrowgeometry.cpp [ 11%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/lennardjones.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc && /usr/bin/c++ -DCalc_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/lennardjones.cpp.o -MF CMakeFiles/Calc.dir/lennardjones.cpp.o.d -o CMakeFiles/Calc.dir/lennardjones.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.cpp [ 11%] Building CXX object avogadro/io/CMakeFiles/IO.dir/cmsgpackformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/cmsgpackformat.cpp.o -MF CMakeFiles/IO.dir/cmsgpackformat.cpp.o.d -o CMakeFiles/IO.dir/cmsgpackformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cmsgpackformat.cpp [ 11%] Building CXX object avogadro/io/CMakeFiles/IO.dir/dcdformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/dcdformat.cpp.o -MF CMakeFiles/IO.dir/dcdformat.cpp.o.d -o CMakeFiles/IO.dir/dcdformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/dcdformat.cpp [ 11%] Building CXX object avogadro/io/CMakeFiles/IO.dir/fileformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/fileformat.cpp.o -MF CMakeFiles/IO.dir/fileformat.cpp.o.d -o CMakeFiles/IO.dir/fileformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.cpp [ 12%] Linking CXX shared module ../lib/avogadro/core.cpython-311-i386-linux-gnu.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/avogadrocorepython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -flto -shared -o ../lib/avogadro/core.cpython-311-i386-linux-gnu.so CMakeFiles/avogadrocorepython.dir/core.cpp.o ../lib/libAvogadroCore.so.1.99.0 [ 13%] Building CXX object avogadro/io/CMakeFiles/IO.dir/fileformatmanager.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/fileformatmanager.cpp.o -MF CMakeFiles/IO.dir/fileformatmanager.cpp.o.d -o CMakeFiles/IO.dir/fileformatmanager.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformatmanager.cpp lto-wrapper: warning: using serial compilation of 5 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information [ 13%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/beziergeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/beziergeometry.cpp.o -MF CMakeFiles/Rendering.dir/beziergeometry.cpp.o.d -o CMakeFiles/Rendering.dir/beziergeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/beziergeometry.cpp [ 14%] Linking CXX shared library ../../lib/libAvogadroCalc.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc && /usr/bin/cmake -E cmake_link_script CMakeFiles/Calc.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libAvogadroCalc.so.1 -o ../../lib/libAvogadroCalc.so.1.99.0 CMakeFiles/Calc.dir/chargemodel.cpp.o CMakeFiles/Calc.dir/chargemanager.cpp.o CMakeFiles/Calc.dir/defaultmodel.cpp.o CMakeFiles/Calc.dir/energycalculator.cpp.o CMakeFiles/Calc.dir/energymanager.cpp.o CMakeFiles/Calc.dir/lennardjones.cpp.o ../../lib/libAvogadroCore.so.1.99.0 cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroCalc.so.1.99.0 ../../lib/libAvogadroCalc.so.1 ../../lib/libAvogadroCalc.so make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 14%] Built target Calc [ 14%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/bufferobject.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/bufferobject.cpp.o -MF CMakeFiles/Rendering.dir/bufferobject.cpp.o.d -o CMakeFiles/Rendering.dir/bufferobject.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bufferobject.cpp [ 14%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o -MF CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bsplinegeometry.cpp [ 14%] Building CXX object avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o -MF CMakeFiles/IO.dir/gromacsformat.cpp.o.d -o CMakeFiles/IO.dir/gromacsformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/gromacsformat.cpp [ 14%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/cartoongeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/cartoongeometry.cpp.o -MF CMakeFiles/Rendering.dir/cartoongeometry.cpp.o.d -o CMakeFiles/Rendering.dir/cartoongeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.cpp [ 14%] Building CXX object avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o -MF CMakeFiles/IO.dir/mdlformat.cpp.o.d -o CMakeFiles/IO.dir/mdlformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/mdlformat.cpp [ 14%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/camera.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/camera.cpp.o -MF CMakeFiles/Rendering.dir/camera.cpp.o.d -o CMakeFiles/Rendering.dir/camera.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/camera.cpp [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/curvegeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/curvegeometry.cpp.o -MF CMakeFiles/Rendering.dir/curvegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/curvegeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.cpp [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o -MF CMakeFiles/IO.dir/vaspformat.cpp.o.d -o CMakeFiles/IO.dir/vaspformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/vaspformat.cpp [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o -MF CMakeFiles/IO.dir/pdbformat.cpp.o.d -o CMakeFiles/IO.dir/pdbformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/pdbformat.cpp [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/cylindergeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/cylindergeometry.cpp.o -MF CMakeFiles/Rendering.dir/cylindergeometry.cpp.o.d -o CMakeFiles/Rendering.dir/cylindergeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.cpp [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/xyzformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/xyzformat.cpp.o -MF CMakeFiles/IO.dir/xyzformat.cpp.o.d -o CMakeFiles/IO.dir/xyzformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/xyzformat.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/python && /usr/bin/strip /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/lib/avogadro/core.cpython-311-i386-linux-gnu.so make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 15%] Built target avogadrocorepython [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/trrformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/trrformat.cpp.o -MF CMakeFiles/IO.dir/trrformat.cpp.o.d -o CMakeFiles/IO.dir/trrformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/trrformat.cpp [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o -MF CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.cpp [ 16%] Building CXX object avogadro/io/CMakeFiles/IO.dir/turbomoleformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/turbomoleformat.cpp.o -MF CMakeFiles/IO.dir/turbomoleformat.cpp.o.d -o CMakeFiles/IO.dir/turbomoleformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/turbomoleformat.cpp [ 16%] Building CXX object avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o -MF CMakeFiles/IO.dir/lammpsformat.cpp.o.d -o CMakeFiles/IO.dir/lammpsformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/lammpsformat.cpp [ 16%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/drawable.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/drawable.cpp.o -MF CMakeFiles/Rendering.dir/drawable.cpp.o.d -o CMakeFiles/Rendering.dir/drawable.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.cpp [ 16%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/geometrynode.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/geometrynode.cpp.o -MF CMakeFiles/Rendering.dir/geometrynode.cpp.o.d -o CMakeFiles/Rendering.dir/geometrynode.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometrynode.cpp [ 16%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/geometryvisitor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/geometryvisitor.cpp.o -MF CMakeFiles/Rendering.dir/geometryvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/geometryvisitor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.cpp [ 16%] Building CXX object avogadro/io/CMakeFiles/IO.dir/hdf5dataformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/c++ -DAVO_USE_HDF5 -DH5_USE_110_API -DIO_EXPORTS -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/struct -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/pugixml -isystem /usr/include/hdf5/serial -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/hdf5dataformat.cpp.o -MF CMakeFiles/IO.dir/hdf5dataformat.cpp.o.d -o CMakeFiles/IO.dir/hdf5dataformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.cpp [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/groupnode.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/groupnode.cpp.o -MF CMakeFiles/Rendering.dir/groupnode.cpp.o.d -o CMakeFiles/Rendering.dir/groupnode.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.cpp [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/glrenderer.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/glrenderer.cpp.o -MF CMakeFiles/Rendering.dir/glrenderer.cpp.o.d -o CMakeFiles/Rendering.dir/glrenderer.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.cpp [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/glrendervisitor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/glrendervisitor.cpp.o -MF CMakeFiles/Rendering.dir/glrendervisitor.cpp.o.d -o CMakeFiles/Rendering.dir/glrendervisitor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.cpp [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/linestripgeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/linestripgeometry.cpp.o -MF CMakeFiles/Rendering.dir/linestripgeometry.cpp.o.d -o CMakeFiles/Rendering.dir/linestripgeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.cpp [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/meshgeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/meshgeometry.cpp.o -MF CMakeFiles/Rendering.dir/meshgeometry.cpp.o.d -o CMakeFiles/Rendering.dir/meshgeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.cpp [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/node.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/node.cpp.o -MF CMakeFiles/Rendering.dir/node.cpp.o.d -o CMakeFiles/Rendering.dir/node.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.cpp [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/plyvisitor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/plyvisitor.cpp.o -MF CMakeFiles/Rendering.dir/plyvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/plyvisitor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.cpp [ 18%] Linking CXX shared library ../../lib/libAvogadroIO.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/cmake -E cmake_link_script CMakeFiles/IO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libAvogadroIO.so.1 -o ../../lib/libAvogadroIO.so.1.99.0 CMakeFiles/IO.dir/cjsonformat.cpp.o CMakeFiles/IO.dir/cmlformat.cpp.o CMakeFiles/IO.dir/cmsgpackformat.cpp.o CMakeFiles/IO.dir/dcdformat.cpp.o CMakeFiles/IO.dir/fileformat.cpp.o CMakeFiles/IO.dir/fileformatmanager.cpp.o CMakeFiles/IO.dir/gromacsformat.cpp.o CMakeFiles/IO.dir/mdlformat.cpp.o CMakeFiles/IO.dir/vaspformat.cpp.o CMakeFiles/IO.dir/pdbformat.cpp.o CMakeFiles/IO.dir/xyzformat.cpp.o CMakeFiles/IO.dir/trrformat.cpp.o CMakeFiles/IO.dir/turbomoleformat.cpp.o CMakeFiles/IO.dir/lammpsformat.cpp.o CMakeFiles/IO.dir/hdf5dataformat.cpp.o /usr/lib/i386-linux-gnu/hdf5/serial/libhdf5.so ../../lib/libAvogadroCore.so.1.99.0 ../../thirdparty/libstruct.a ../../thirdparty/libpugixml.a [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/povrayvisitor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/povrayvisitor.cpp.o -MF CMakeFiles/Rendering.dir/povrayvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/povrayvisitor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.cpp [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/quad.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/quad.cpp.o -MF CMakeFiles/Rendering.dir/quad.cpp.o.d -o CMakeFiles/Rendering.dir/quad.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/quad.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroIO.so.1.99.0 ../../lib/libAvogadroIO.so.1 ../../lib/libAvogadroIO.so make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 18%] Built target IO make -f avogadro/quantumio/CMakeFiles/QuantumIO.dir/build.make avogadro/quantumio/CMakeFiles/QuantumIO.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio/CMakeFiles/QuantumIO.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/quantumio/CMakeFiles/QuantumIO.dir/build.make avogadro/quantumio/CMakeFiles/QuantumIO.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 18%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/gamessus.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio && /usr/bin/c++ -DQuantumIO_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/gamessus.cpp.o -MF CMakeFiles/QuantumIO.dir/gamessus.cpp.o.d -o CMakeFiles/QuantumIO.dir/gamessus.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessus.cpp [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/quadoutline.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/quadoutline.cpp.o -MF CMakeFiles/Rendering.dir/quadoutline.cpp.o.d -o CMakeFiles/Rendering.dir/quadoutline.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/quadoutline.cpp [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/scene.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/scene.cpp.o -MF CMakeFiles/Rendering.dir/scene.cpp.o.d -o CMakeFiles/Rendering.dir/scene.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.cpp [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/shader.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/shader.cpp.o -MF CMakeFiles/Rendering.dir/shader.cpp.o.d -o CMakeFiles/Rendering.dir/shader.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.cpp [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/shaderprogram.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/shaderprogram.cpp.o -MF CMakeFiles/Rendering.dir/shaderprogram.cpp.o.d -o CMakeFiles/Rendering.dir/shaderprogram.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.cpp [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/solidpipeline.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/solidpipeline.cpp.o -MF CMakeFiles/Rendering.dir/solidpipeline.cpp.o.d -o CMakeFiles/Rendering.dir/solidpipeline.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/solidpipeline.cpp [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/spheregeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/spheregeometry.cpp.o -MF CMakeFiles/Rendering.dir/spheregeometry.cpp.o.d -o CMakeFiles/Rendering.dir/spheregeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.cpp [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textlabel2d.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textlabel2d.cpp.o -MF CMakeFiles/Rendering.dir/textlabel2d.cpp.o.d -o CMakeFiles/Rendering.dir/textlabel2d.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabel2d.cpp [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textlabel3d.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textlabel3d.cpp.o -MF CMakeFiles/Rendering.dir/textlabel3d.cpp.o.d -o CMakeFiles/Rendering.dir/textlabel3d.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabel3d.cpp [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textlabelbase.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textlabelbase.cpp.o -MF CMakeFiles/Rendering.dir/textlabelbase.cpp.o.d -o CMakeFiles/Rendering.dir/textlabelbase.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.cpp [ 20%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textproperties.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textproperties.cpp.o -MF CMakeFiles/Rendering.dir/textproperties.cpp.o.d -o CMakeFiles/Rendering.dir/textproperties.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.cpp [ 20%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o -MF CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o.d -o CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textrenderstrategy.cpp [ 21%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio && /usr/bin/c++ -DQuantumIO_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o -MF CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o.d -o CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gaussianfchk.cpp [ 21%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/texture2d.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/texture2d.cpp.o -MF CMakeFiles/Rendering.dir/texture2d.cpp.o.d -o CMakeFiles/Rendering.dir/texture2d.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.cpp [ 21%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/transformnode.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/transformnode.cpp.o -MF CMakeFiles/Rendering.dir/transformnode.cpp.o.d -o CMakeFiles/Rendering.dir/transformnode.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/transformnode.cpp [ 21%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/visitor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/visitor.cpp.o -MF CMakeFiles/Rendering.dir/visitor.cpp.o.d -o CMakeFiles/Rendering.dir/visitor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.cpp [ 21%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/volumegeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/volumegeometry.cpp.o -MF CMakeFiles/Rendering.dir/volumegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/volumegeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/volumegeometry.cpp [ 21%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o -MF CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.cpp [ 22%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering && /usr/bin/c++ -DRendering_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o -MF CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o.d -o CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/ambientocclusionspheregeometry.cpp [ 22%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio && /usr/bin/c++ -DQuantumIO_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 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-fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericoutput.cpp.o -MF CMakeFiles/QuantumIO.dir/genericoutput.cpp.o.d -o CMakeFiles/QuantumIO.dir/genericoutput.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/genericoutput.cpp [ 22%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/molden.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio && /usr/bin/c++ -DQuantumIO_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/molden.cpp.o -MF CMakeFiles/QuantumIO.dir/molden.cpp.o.d -o CMakeFiles/QuantumIO.dir/molden.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/molden.cpp [ 22%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/mopacaux.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio && /usr/bin/c++ -DQuantumIO_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/mopacaux.cpp.o -MF CMakeFiles/QuantumIO.dir/mopacaux.cpp.o.d -o CMakeFiles/QuantumIO.dir/mopacaux.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/mopacaux.cpp [ 22%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o cd 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/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o -MF CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o.d -o CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/nwchemlog.cpp [ 23%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/orca.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio && /usr/bin/c++ -DQuantumIO_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 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avogadro/command/CMakeFiles/avobabel.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 23%] Building CXX object avogadro/command/CMakeFiles/avobabel.dir/avobabel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/command && /usr/bin/c++ -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/command/CMakeFiles/avobabel.dir/avobabel.cpp.o -MF CMakeFiles/avobabel.dir/avobabel.cpp.o.d -o CMakeFiles/avobabel.dir/avobabel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/command/avobabel.cpp [ 23%] Linking CXX executable ../../bin/avocjsontocml cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/command && /usr/bin/cmake -E cmake_link_script CMakeFiles/avocjsontocml.dir/link.txt --verbose=1 /usr/bin/c++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed CMakeFiles/avocjsontocml.dir/cjsontocml.cpp.o -o ../../bin/avocjsontocml ../../lib/libAvogadroIO.so.1.99.0 ../../lib/libAvogadroCore.so.1.99.0 make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 23%] Built target avocjsontocml make -f avogadro/qtgui/CMakeFiles/QtGui_autogen_timestamp_deps.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/CMakeFiles/QtGui_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtgui/CMakeFiles/QtGui_autogen_timestamp_deps.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtgui/CMakeFiles/QtGui_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 23%] Built target QtGui_autogen_timestamp_deps make -f avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 23%] Automatic MOC for target QtGui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtgui/backgroundfileformat.h" AutoGen: Parsing "SRC:/avogadro/qtgui/colorbutton.h" AutoGen: Parsing "SRC:/avogadro/qtgui/containerwidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/customelementdialog.h" AutoGen: Parsing "SRC:/avogadro/qtgui/elementdetail_p.h" AutoGen: Parsing "SRC:/avogadro/qtgui/elementitem_p.h" AutoGen: Parsing "SRC:/avogadro/qtgui/elementtranslator.h" AutoGen: Parsing "SRC:/avogadro/qtgui/extensionplugin.h" AutoGen: Parsing "SRC:/avogadro/qtgui/filebrowsewidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/fileformatdialog.h" AutoGen: Parsing "SRC:/avogadro/qtgui/generichighlighter.h" AutoGen: Parsing "SRC:/avogadro/qtgui/hydrogentools.h" AutoGen: Parsing "SRC:/avogadro/qtgui/insertfragmentdialog.h" AutoGen: Parsing "SRC:/avogadro/qtgui/interfacescript.h" AutoGen: Parsing "SRC:/avogadro/qtgui/interfacewidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/jsonwidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/layermodel.h" AutoGen: Parsing "SRC:/avogadro/qtgui/meshgenerator.h" AutoGen: Parsing "SRC:/avogadro/qtgui/molecule.h" AutoGen: Parsing "SRC:/avogadro/qtgui/moleculemodel.h" AutoGen: Parsing "SRC:/avogadro/qtgui/periodictablescene_p.h" AutoGen: Parsing "SRC:/avogadro/qtgui/periodictableview.h" AutoGen: Parsing "SRC:/avogadro/qtgui/persistentatom.h" AutoGen: Parsing "SRC:/avogadro/qtgui/persistentbond.h" AutoGen: Parsing "SRC:/avogadro/qtgui/pluginlayermanager.h" AutoGen: Parsing "SRC:/avogadro/qtgui/multiviewwidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/pythonscript.h" AutoGen: Parsing "SRC:/avogadro/qtgui/rwlayermanager.h" AutoGen: Parsing "SRC:/avogadro/qtgui/rwmolecule.h" AutoGen: Parsing "SRC:/avogadro/qtgui/sceneplugin.h" AutoGen: Parsing "SRC:/avogadro/qtgui/scenepluginmodel.h" AutoGen: Parsing "SRC:/avogadro/qtgui/scriptloader.h" AutoGen: Parsing "SRC:/avogadro/qtgui/sortfiltertreeproxymodel.h" AutoGen: Parsing "SRC:/avogadro/qtgui/toolplugin.h" AutoGen: Parsing "SRC:/avogadro/qtgui/utilities.h" AutoGen: Parsing "SRC:/avogadro/qtgui/viewfactory.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtgui/avogadroqtguiexport.h" AutoGen: Parsing "SRC:/avogadro/qtgui/backgroundfileformat.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/colorbutton.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/containerwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/customelementdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/elementdetail_p.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/elementitem_p.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/elementtranslator.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/extensionplugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/filebrowsewidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/fileformatdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/generichighlighter.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/hydrogentools.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/insertfragmentdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/interfacescript.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/interfacewidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/jsonwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/layermodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/meshgenerator.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/molecule.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/moleculemodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/multiviewwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/periodictablescene_p.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/periodictableview.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/pluginlayermanager.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/pythonscript.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/rwlayermanager.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/rwmolecule.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/sceneplugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/scenepluginmodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/sortfiltertreeproxymodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/toolplugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/scriptloader.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/utilities.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/viewfactory.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/backgroundfileformat.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/backgroundfileformat.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/colorbutton.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/containerwidget.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/customelementdialog.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/customelementdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/elementtranslator.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementtranslator.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/extensionplugin.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/extensionplugin.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/filebrowsewidget.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/fileformatdialog.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/fileformatdialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/generichighlighter.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/generichighlighter.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/insertfragmentdialog.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/interfacescript.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacescript.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/interfacewidget.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacewidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/jsonwidget.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/layermodel.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/meshgenerator.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/molecule.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/moleculemodel.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/multiviewwidget.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/periodictablescene_p.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictablescene_p.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/periodictableview.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictableview.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/pythonscript.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/rwmolecule.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/sceneplugin.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/scenepluginmodel.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scriptloader.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/scriptloader.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scriptloader.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scriptloader.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/sortfiltertreeproxymodel.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sortfiltertreeproxymodel.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_toolplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/toolplugin.h" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_toolplugin.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/toolplugin.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include/multiviewwidget.moc", because it doesn't exist, from "SRC:/avogadro/qtgui/multiviewwidget.cpp" /usr/lib/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include/multiviewwidget.moc /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scriptloader.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_toolplugin.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include/multiviewwidget.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 23%] Built target QtGui_autogen make -f avogadro/qtgui/CMakeFiles/QtGui.dir/build.make avogadro/qtgui/CMakeFiles/QtGui.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 23%] Generating ui_insertfragmentdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/ui_insertfragmentdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.ui [ 24%] Generating qrc_qtgui.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/lib/qt5/bin/rcc --name qtgui --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/qrc_qtgui.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/qtgui.qrc [ 24%] Generating ui_customelementdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/ui_customelementdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/customelementdialog.ui [ 24%] Linking CXX executable ../../bin/avobabel cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/command && /usr/bin/cmake -E cmake_link_script CMakeFiles/avobabel.dir/link.txt --verbose=1 /usr/bin/c++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed CMakeFiles/avobabel.dir/avobabel.cpp.o -o ../../bin/avobabel ../../lib/libAvogadroIO.so.1.99.0 ../../lib/libAvogadroCore.so.1.99.0 cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/CMakeFiles/QtGui.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtgui/CMakeFiles/QtGui.dir/build.make avogadro/qtgui/CMakeFiles/QtGui.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 24%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/backgroundfileformat.cpp.o [ 24%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/QtGui_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 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avobabel [ 24%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/containerwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/customelementdialog.cpp.o -MF CMakeFiles/QtGui.dir/customelementdialog.cpp.o.d -o CMakeFiles/QtGui.dir/customelementdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/customelementdialog.cpp [ 25%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/elementdetail_p.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/elementdetail_p.cpp.o -MF CMakeFiles/QtGui.dir/elementdetail_p.cpp.o.d -o CMakeFiles/QtGui.dir/elementdetail_p.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementdetail_p.cpp [ 25%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/elementitem_p.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro 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CMakeFiles/QtGui.dir/elementitem_p.cpp.o.d -o CMakeFiles/QtGui.dir/elementitem_p.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementitem_p.cpp [ 25%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/elementtranslator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui 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Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/extensionplugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/extensionplugin.cpp.o -MF CMakeFiles/QtGui.dir/extensionplugin.cpp.o.d -o CMakeFiles/QtGui.dir/extensionplugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/extensionplugin.cpp [ 25%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o -MF CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o.d -o CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.cpp [ 25%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/fileformatdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/fileformatdialog.cpp.o -MF CMakeFiles/QtGui.dir/fileformatdialog.cpp.o.d -o CMakeFiles/QtGui.dir/fileformatdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/fileformatdialog.cpp [ 25%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/generichighlighter.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/generichighlighter.cpp.o -MF CMakeFiles/QtGui.dir/generichighlighter.cpp.o.d -o CMakeFiles/QtGui.dir/generichighlighter.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/generichighlighter.cpp [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/hydrogentools.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/hydrogentools.cpp.o -MF CMakeFiles/QtGui.dir/hydrogentools.cpp.o.d -o CMakeFiles/QtGui.dir/hydrogentools.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/hydrogentools.cpp [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/insertfragmentdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/insertfragmentdialog.cpp.o -MF CMakeFiles/QtGui.dir/insertfragmentdialog.cpp.o.d -o CMakeFiles/QtGui.dir/insertfragmentdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.cpp [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/interfacescript.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/interfacescript.cpp.o -MF CMakeFiles/QtGui.dir/interfacescript.cpp.o.d -o CMakeFiles/QtGui.dir/interfacescript.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacescript.cpp [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/interfacewidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/interfacewidget.cpp.o -MF CMakeFiles/QtGui.dir/interfacewidget.cpp.o.d -o CMakeFiles/QtGui.dir/interfacewidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacewidget.cpp [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/jsonwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/jsonwidget.cpp.o -MF CMakeFiles/QtGui.dir/jsonwidget.cpp.o.d -o CMakeFiles/QtGui.dir/jsonwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.cpp [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/layermodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/layermodel.cpp.o -MF CMakeFiles/QtGui.dir/layermodel.cpp.o.d -o CMakeFiles/QtGui.dir/layermodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.cpp [ 26%] Linking CXX shared library ../../lib/libAvogadroQuantumIO.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio && /usr/bin/cmake -E cmake_link_script CMakeFiles/QuantumIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libAvogadroQuantumIO.so.1 -o ../../lib/libAvogadroQuantumIO.so.1.99.0 CMakeFiles/QuantumIO.dir/gamessus.cpp.o CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o CMakeFiles/QuantumIO.dir/genericoutput.cpp.o CMakeFiles/QuantumIO.dir/molden.cpp.o CMakeFiles/QuantumIO.dir/mopacaux.cpp.o CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o CMakeFiles/QuantumIO.dir/orca.cpp.o ../../lib/libAvogadroIO.so.1.99.0 ../../lib/libAvogadroCore.so.1.99.0 [ 27%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/rwlayermanager.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/rwlayermanager.cpp.o -MF CMakeFiles/QtGui.dir/rwlayermanager.cpp.o.d -o CMakeFiles/QtGui.dir/rwlayermanager.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.cpp [ 27%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/meshgenerator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem 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directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 28%] Building CXX object avogadro/command/CMakeFiles/qube.dir/qube.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/command && /usr/bin/c++ -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/command/CMakeFiles/qube.dir/qube.cpp.o -MF CMakeFiles/qube.dir/qube.cpp.o.d -o CMakeFiles/qube.dir/qube.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/command/qube.cpp [ 28%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/molecule.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu 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/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.cpp [ 28%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/moleculemodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/moleculemodel.cpp.o -MF CMakeFiles/QtGui.dir/moleculemodel.cpp.o.d -o CMakeFiles/QtGui.dir/moleculemodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.cpp [ 28%] Linking CXX executable ../../bin/qube cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/command && /usr/bin/cmake -E cmake_link_script CMakeFiles/qube.dir/link.txt --verbose=1 /usr/bin/c++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed CMakeFiles/qube.dir/qube.cpp.o -o ../../bin/qube ../../lib/libAvogadroQuantumIO.so.1.99.0 ../../lib/libAvogadroIO.so.1.99.0 ../../lib/libAvogadroCore.so.1.99.0 [ 28%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/multiviewwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/multiviewwidget.cpp.o -MF CMakeFiles/QtGui.dir/multiviewwidget.cpp.o.d -o CMakeFiles/QtGui.dir/multiviewwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 28%] Built target qube make -f python/CMakeFiles/avogadroiopython.dir/build.make python/CMakeFiles/avogadroiopython.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/python /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/python /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/python/CMakeFiles/avogadroiopython.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f python/CMakeFiles/avogadroiopython.dir/build.make python/CMakeFiles/avogadroiopython.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 28%] Building CXX object python/CMakeFiles/avogadroiopython.dir/io.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/python && /usr/bin/c++ -Davogadroiopython_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -isystem /usr/include/python3.11 -isystem /usr/include/eigen3 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -flto -fno-fat-lto-objects -MD -MT python/CMakeFiles/avogadroiopython.dir/io.cpp.o -MF CMakeFiles/avogadroiopython.dir/io.cpp.o.d -o CMakeFiles/avogadroiopython.dir/io.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/python/io.cpp [ 28%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o -MF CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o.d -o CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictablescene_p.cpp [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/periodictableview.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/periodictableview.cpp.o -MF CMakeFiles/QtGui.dir/periodictableview.cpp.o.d -o CMakeFiles/QtGui.dir/periodictableview.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictableview.cpp [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o -MF CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o.d -o CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pluginlayermanager.cpp [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/pythonscript.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/pythonscript.cpp.o -MF CMakeFiles/QtGui.dir/pythonscript.cpp.o.d -o CMakeFiles/QtGui.dir/pythonscript.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.cpp [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/rwmolecule.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/rwmolecule.cpp.o -MF CMakeFiles/QtGui.dir/rwmolecule.cpp.o.d -o CMakeFiles/QtGui.dir/rwmolecule.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.cpp [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/sceneplugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/sceneplugin.cpp.o -MF CMakeFiles/QtGui.dir/sceneplugin.cpp.o.d -o CMakeFiles/QtGui.dir/sceneplugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.cpp [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o -MF CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o.d -o CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.cpp [ 30%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/scriptloader.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/scriptloader.cpp.o -MF CMakeFiles/QtGui.dir/scriptloader.cpp.o.d -o CMakeFiles/QtGui.dir/scriptloader.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scriptloader.cpp [ 30%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/sortfiltertreeproxymodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/sortfiltertreeproxymodel.cpp.o -MF CMakeFiles/QtGui.dir/sortfiltertreeproxymodel.cpp.o.d -o CMakeFiles/QtGui.dir/sortfiltertreeproxymodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sortfiltertreeproxymodel.cpp [ 30%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/toolplugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/toolplugin.cpp.o -MF CMakeFiles/QtGui.dir/toolplugin.cpp.o.d -o CMakeFiles/QtGui.dir/toolplugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/toolplugin.cpp [ 30%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/utilities.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/utilities.cpp.o -MF CMakeFiles/QtGui.dir/utilities.cpp.o.d -o CMakeFiles/QtGui.dir/utilities.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/utilities.cpp [ 30%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/viewfactory.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/viewfactory.cpp.o -MF CMakeFiles/QtGui.dir/viewfactory.cpp.o.d -o CMakeFiles/QtGui.dir/viewfactory.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/viewfactory.cpp [ 30%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/c++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib/i386-linux-gnu\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/QtGui_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o -MF CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o.d -o CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui/qrc_qtgui.cpp [ 30%] Linking CXX shared module ../lib/avogadro/io.cpython-311-i386-linux-gnu.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/python && /usr/bin/cmake -E cmake_link_script CMakeFiles/avogadroiopython.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -flto -shared -o ../lib/avogadro/io.cpython-311-i386-linux-gnu.so CMakeFiles/avogadroiopython.dir/io.cpp.o ../lib/libAvogadroQuantumIO.so.1.99.0 ../lib/libAvogadroIO.so.1.99.0 ../lib/libAvogadroCore.so.1.99.0 lto-wrapper: warning: using serial compilation of 3 LTRANS jobs lto-wrapper: note: see the '-flto' option documentation for more information [ 31%] Linking CXX shared library ../../lib/libAvogadroQtGui.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/cmake -E cmake_link_script CMakeFiles/QtGui.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libAvogadroQtGui.so.1 -o ../../lib/libAvogadroQtGui.so.1.99.0 CMakeFiles/QtGui.dir/QtGui_autogen/mocs_compilation.cpp.o CMakeFiles/QtGui.dir/backgroundfileformat.cpp.o CMakeFiles/QtGui.dir/colorbutton.cpp.o CMakeFiles/QtGui.dir/containerwidget.cpp.o CMakeFiles/QtGui.dir/customelementdialog.cpp.o CMakeFiles/QtGui.dir/elementdetail_p.cpp.o CMakeFiles/QtGui.dir/elementitem_p.cpp.o CMakeFiles/QtGui.dir/elementtranslator.cpp.o CMakeFiles/QtGui.dir/extensionplugin.cpp.o CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o CMakeFiles/QtGui.dir/fileformatdialog.cpp.o CMakeFiles/QtGui.dir/generichighlighter.cpp.o CMakeFiles/QtGui.dir/hydrogentools.cpp.o CMakeFiles/QtGui.dir/insertfragmentdialog.cpp.o CMakeFiles/QtGui.dir/interfacescript.cpp.o CMakeFiles/QtGui.dir/interfacewidget.cpp.o CMakeFiles/QtGui.dir/jsonwidget.cpp.o CMakeFiles/QtGui.dir/layermodel.cpp.o CMakeFiles/QtGui.dir/rwlayermanager.cpp.o CMakeFiles/QtGui.dir/meshgenerator.cpp.o CMakeFiles/QtGui.dir/molecule.cpp.o CMakeFiles/QtGui.dir/moleculemodel.cpp.o CMakeFiles/QtGui.dir/multiviewwidget.cpp.o CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o CMakeFiles/QtGui.dir/periodictableview.cpp.o CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o CMakeFiles/QtGui.dir/pythonscript.cpp.o CMakeFiles/QtGui.dir/rwmolecule.cpp.o CMakeFiles/QtGui.dir/sceneplugin.cpp.o CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o CMakeFiles/QtGui.dir/scriptloader.cpp.o CMakeFiles/QtGui.dir/sortfiltertreeproxymodel.cpp.o CMakeFiles/QtGui.dir/toolplugin.cpp.o CMakeFiles/QtGui.dir/utilities.cpp.o CMakeFiles/QtGui.dir/viewfactory.cpp.o CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o ../../lib/libAvogadroIO.so.1.99.0 ../../lib/libAvogadroCore.so.1.99.0 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtGui.so.1.99.0 ../../lib/libAvogadroQtGui.so.1 ../../lib/libAvogadroQtGui.so make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target QtGui make -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen_timestamp_deps.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen_timestamp_deps.dir/depend make -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen_timestamp_deps.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/CMakeFiles/MoleQueue_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen_timestamp_deps.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/molequeue/CMakeFiles/MoleQueue_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen_timestamp_deps.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen_timestamp_deps.dir/build [ 31%] Built target MoleQueue_autogen_timestamp_deps make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target Bonding_autogen_timestamp_deps [ 31%] Built target QtOpenGL_autogen_timestamp_deps [ 31%] Built target ThreeDMol_autogen_timestamp_deps make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen_timestamp_deps.dir/depend [ 31%] Built target ApplyColors_autogen_timestamp_deps make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen_timestamp_deps.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target Cartoons_autogen_timestamp_deps make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen_timestamp_deps.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen_timestamp_deps.dir/build [ 31%] Built target CopyPaste_autogen_timestamp_deps make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target ConfigurePython_autogen_timestamp_deps make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen_timestamp_deps.dir/build [ 31%] Built target Centroid_autogen_timestamp_deps make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target CrystalScene_autogen_timestamp_deps make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen_timestamp_deps.dir/depend [ 31%] Built target Crystal_autogen_timestamp_deps make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen_timestamp_deps.dir/build [ 31%] Built target NucleicInput_autogen_timestamp_deps make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/label/CMakeFiles/Label_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen_timestamp_deps.dir/depend [ 31%] Built target ImportPQR_autogen_timestamp_deps make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/Label_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target CustomElements_autogen_timestamp_deps make -f avogadro/qtplugins/label/CMakeFiles/Label_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen_timestamp_deps.dir/build [ 31%] Built target FetchPDB_autogen_timestamp_deps make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen_timestamp_deps.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/label/CMakeFiles/Label_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target Hydrogens_autogen_timestamp_deps make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" [ 31%] Built target Label_autogen_timestamp_deps make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen_timestamp_deps.dir/depend [ 31%] Built target LammpsInput_autogen_timestamp_deps make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target OpenBabel_autogen_timestamp_deps make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/ply/CMakeFiles/PLY_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target LineFormatInput_autogen_timestamp_deps [ 31%] Built target PLY_autogen_timestamp_deps make -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen_timestamp_deps.dir/depend [ 31%] Built target NetworkDatabases_autogen_timestamp_deps [ 31%] Built target OpenMMInput_autogen_timestamp_deps make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/select/CMakeFiles/Select_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/CMakeFiles/Select_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen_timestamp_deps.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/select/CMakeFiles/Select_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/select/CMakeFiles/Select_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target POVRay_autogen_timestamp_deps [ 31%] Built target Select_autogen_timestamp_deps make -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen_timestamp_deps.dir/depend [ 31%] Built target SpaceGroup_autogen_timestamp_deps make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen_timestamp_deps.dir/depend [ 31%] Built target Vibrations_autogen_timestamp_deps make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" [ 31%] Built target PropertyTables_autogen_timestamp_deps make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target CoordinateEditor_autogen_timestamp_deps [ 31%] Built target Forcefield_autogen_timestamp_deps [ 31%] Built target InsertFragment_autogen_timestamp_deps [ 31%] Built target MolecularProperties_autogen_timestamp_deps make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen_timestamp_deps.dir/depend [ 31%] Built target VRML_autogen_timestamp_deps make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen_timestamp_deps.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen_timestamp_deps.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target commands_autogen_timestamp_deps [ 31%] Built target ScriptFileFormats_autogen_timestamp_deps [ 31%] Built target ScriptCharges_autogen_timestamp_deps [ 31%] Built target PluginDownloader_autogen_timestamp_deps make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen_timestamp_deps.dir/depend [ 31%] Built target BallStick_autogen_timestamp_deps make -f avogadro/qtplugins/force/CMakeFiles/Force_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen_timestamp_deps.dir/depend make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/CMakeFiles/Force_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 31%] Built target CloseContacts_autogen_timestamp_deps make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/force/CMakeFiles/Force_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/force/CMakeFiles/Force_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen_timestamp_deps.dir/depend [ 31%] Built target Licorice_autogen_timestamp_deps [ 31%] Built target Force_autogen_timestamp_deps make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen_timestamp_deps.dir/depend make -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" [ 31%] Built target Meshes_autogen_timestamp_deps [ 31%] Built target NonCovalent_autogen_timestamp_deps make -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen_timestamp_deps.dir/build [ 32%] Automatic MOC for target QtOpenGL make -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/AutogenInfo.json None make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 32%] Automatic MOC for target MoleQueue cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/AutogenInfo.json None cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/python && /usr/bin/strip /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/lib/avogadro/io.cpython-311-i386-linux-gnu.so AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Refreshing parse cache because it doesn't exist. [ 32%] Automatic MOC for target ThreeDMol cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenInfo.json None AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 32%] Built target VanDerWaals_autogen_timestamp_deps make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/depend AutoGen: Refreshing parse cache because it doesn't exist. [ 32%] Built target Wireframe_autogen_timestamp_deps AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/molequeue/batchjob.h" make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/depend AutoGen: Parsing "SRC:/avogadro/molequeue/inputgenerator.h" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratordialog.h" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratorwidget.h" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuedialog.h" AutoGen: Parsing "SRC:/avogadro/molequeue/client/client.h" AutoGen: Parsing "SRC:/avogadro/molequeue/client/jobobject.h" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuemanager.h" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuequeuelistmodel.h" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuewidget.h" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/molequeue/avogadromolequeueexport.h" AutoGen: Parsing "SRC:/avogadro/molequeue/client/jsonrpcclient.h" AutoGen: Parsing "SRC:/avogadro/molequeue/batchjob.cpp" AutoGen: Parsing "SRC:/avogadro/qtopengl/activeobjects.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/avogadroqtopenglexport.h" AutoGen: Parsing "SRC:/avogadro/qtopengl/glwidget.h" AutoGen: Parsing "SRC:/avogadro/molequeue/client/client.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/client/jobobject.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmol.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmol.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtopengl/qttextrenderstrategy.h" AutoGen: Parsing "SRC:/avogadro/qtopengl/activeobjects.cpp" AutoGen: Parsing "SRC:/avogadro/qtopengl/qttextrenderstrategy.cpp" AutoGen: Parsing "SRC:/avogadro/qtopengl/glwidget.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/client/jsonrpcclient.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgenerator.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratordialog.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratorwidget.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuedialog.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuemanager.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/3dmol/3dmol.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol/3dmol.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol/3dmoldialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp [ 32%] Built target avogadroiopython AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuequeuelistmodel.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuewidget.cpp" make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/depend AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp", because it doesn't exist, from "SRC:/avogadro/qtopengl/activeobjects.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/activeobjects.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtopengl/glwidget.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/glwidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/batchjob.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/batchjob.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/client/client.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/client/jsonrpcclient.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jsonrpcclient.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgenerator.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgenerator.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgeneratordialog.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratordialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgeneratorwidget.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratorwidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuedialog.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuedialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuemanager.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuemanager.h make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build [ 32%] Automatic MOC for target Bonding cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/AutogenInfo.json None make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 33%] Automatic MOC for target ApplyColors cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 33%] Automatic MOC for target Cartoons cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/bonding/bonding.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/bonding/bonding.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/BondingPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/bonding/bonding.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding/bonding.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/BondingPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/BondingPlugin.cpp AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/applycolors/applycolors.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/cartoons/cartoons.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/cartoons/cartoons.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/applycolors/applycolors.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cartoons/cartoons.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons/cartoons.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/applycolors/applycolors.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors/applycolors.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuequeuelistmodel.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuewidget.h" /usr/lib/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuewidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp.d" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/deps" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/deps" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/timestamp AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp.d" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/timestamp [ 33%] Built target ThreeDMol_autogen make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/deps" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/DependInfo.cmake "--color=" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/ParseCache.txt" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/timestamp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/timestamp [ 33%] Built target Bonding_autogen [ 33%] Built target Cartoons_autogen make -f avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen.dir/build.make avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 33%] Built target QtOpenGL_autogen make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp.d" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen.dir/build.make avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/depend [ 33%] Automatic MOC for target Centroid cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/AutogenInfo.json None make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 33%] Built target ApplyColors_autogen AutoGen: Refreshing parse cache because it doesn't exist. make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/qtplugins/centroid/centroid.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/centroid/centroid.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CentroidPlugin.cpp" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/AutogenUsed.txt" [ 33%] Automatic MOC for target ConfigurePython cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen.dir/AutogenInfo.json None AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/centroid/centroid.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid/centroid.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CentroidPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CentroidPlugin.cpp [ 34%] Automatic MOC for target CopyPaste make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/AutogenInfo.json None make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/timestamp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build AutoGen: Refreshing parse cache because it doesn't exist. make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 34%] Automatic MOC for target Crystal cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/copypaste/copypaste.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/copypaste/copypaste.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/copypaste/copypaste.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste/copypaste.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp [ 34%] Built target MoleQueue_autogen make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/depend AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 34%] Automatic MOC for target CrystalScene make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/configurepython/condadialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/configurepython/configurepython.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/configurepython/configurepythondialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/configurepython/condadialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/configurepython/configurepython.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/configurepython/configurepythondialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePythonPlugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystal.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/supercelldialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/unitcelldialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystal.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/supercelldialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/unitcelldialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_condadialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/configurepython/condadialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_condadialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython/condadialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_configurepython.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/configurepython/configurepython.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_configurepython.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython/configurepython.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_configurepythondialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/configurepython/configurepythondialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_configurepythondialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython/configurepythondialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/include/ConfigurePythonPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePythonPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/include/ConfigurePythonPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePythonPlugin.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/crystal.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/crystal.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/importcrystaldialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/supercelldialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/supercelldialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/unitcelldialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/unitcelldialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/volumescalingdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalPlugin.cpp AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystalscene.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystalscene.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/crystalscene.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/crystalscene.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp [ 34%] Automatic MOC for target CustomElements cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/AutogenInfo.json None AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp.d" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/ParseCache.txt" AutoGen: Parsing "SRC:/avogadro/qtplugins/customelements/customelements.h" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/AutogenUsed.txt" AutoGen: Parsing "SRC:/avogadro/qtplugins/customelements/customelements.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/timestamp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/customelements/customelements.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements/customelements.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_configurepython.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 34%] Built target Centroid_autogen make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp.d" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/include/ConfigurePythonPlugin.moc.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_condadialog.cpp.d" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 34%] Built target CopyPaste_autogen [ 34%] Automatic MOC for target FetchPDB make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/depend cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/AutogenInfo.json None AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/EWIEGA46WW/moc_configurepythondialog.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/deps" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp.d" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp.d" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/timestamp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/deps" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 35%] Automatic MOC for target Hydrogens cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb/fetchpdb.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp [ 35%] Built target ConfigurePython_autogen make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/DependInfo.cmake "--color=" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 35%] Built target CustomElements_autogen make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/mocs_compilation.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/hydrogens/hydrogens.h" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/deps" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/hydrogens/hydrogens.cpp" make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/ParseCache.txt" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/ParseCache.txt" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/DependInfo.cmake "--color=" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/timestamp [ 35%] Automatic MOC for target ImportPQR cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/AutogenInfo.json None AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/hydrogens/hydrogens.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens/hydrogens.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 35%] Built target Crystal_autogen make -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/DependInfo.cmake "--color=" [ 35%] Automatic MOC for target NucleicInput cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/importpqr.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrrequest.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/importpqr.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrrequest.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrwidget.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/importpqr.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr/importpqr.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/pqrrequest.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr/pqrrequest.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/pqrwidget.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr/pqrwidget.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build [ 35%] Built target CrystalScene_autogen AutoGen: Refreshing parse cache because it doesn't exist. make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/depend AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/DependInfo.cmake "--color=" [ 35%] Automatic MOC for target Label cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/insertdna/insertdna.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/insertdna/insertdna.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/timestamp AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertdna/insertdna.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna/insertdna.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 35%] Automatic MOC for target LammpsInput cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/AutogenInfo.json None [ 35%] Built target FetchPDB_autogen make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/depend AutoGen: Parsing "SRC:/avogadro/qtplugins/label/label.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/label/label.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/label/label.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label/label.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelPlugin.cpp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/DependInfo.cmake "--color=" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput/lammpsinput.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc.d" [ 35%] Automatic MOC for target LineFormatInput cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/AutogenInfo.json None AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp.d" [ 35%] Built target Hydrogens_autogen make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp.d" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/AutogenUsed.txt" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput/lineformatinput.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp [ 35%] Automatic MOC for target NetworkDatabases cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/AutogenInfo.json None cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc.d" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 35%] Built target NucleicInput_autogen AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp.d" make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/depend AutoGen: Parsing "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases/networkdatabases.h make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/AutogenUsed.txt" [ 35%] Built target ImportPQR_autogen cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/timestamp make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/DependInfo.cmake "--color=" [ 35%] Built target LammpsInput_autogen make -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/DependInfo.cmake "--color=" [ 35%] Automatic MOC for target OpenBabel cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/AutogenInfo.json None make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/deps" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp.d" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/timestamp AutoGen: Refreshing parse cache because it doesn't exist. [ 35%] Automatic MOC for target PLY AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/AutogenInfo.json None [ 35%] Automatic MOC for target OpenMMInput cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/AutogenInfo.json None AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/deps" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/timestamp AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/conformersearchdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obcharges.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obfileformat.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.h" [ 35%] Built target Label_autogen AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obprocess.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/openbabel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/conformersearchdialog.cpp" make -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/depend AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obfileformat.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/openbabel.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obcharges.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/ply/ply.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/ply/ply.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLYPlugin.cpp" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/ply/ply.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply/ply.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLYPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLYPlugin.cpp AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obprocess.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openmminput/openmminput.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput/openmminput.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput/openmminputdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_conformersearchdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/conformersearchdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_conformersearchdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/conformersearchdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obforcefielddialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obprocess.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obprocess.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/openbabel.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/openbabel.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obcharges.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obcharges.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obfileformat.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obfileformat.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp [ 35%] Built target LineFormatInput_autogen make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc.d" [ 36%] Automatic MOC for target POVRay cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/AutogenInfo.json None AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/timestamp AutoGen: Refreshing parse cache because it doesn't exist. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Automatic MOC for target PropertyTables cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/povray/povray.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/povray/povray.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRayPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/povray/povray.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray/povray.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRayPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRayPlugin.cpp [ 36%] Built target NetworkDatabases_autogen make -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/DependInfo.cmake "--color=" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertymodel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertytables.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertyview.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertyview.cpp" [ 36%] Automatic MOC for target Select cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertymodel.cpp" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc.d" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertytables.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/deps" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertymodel.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables/propertymodel.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertytables.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables/propertytables.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertyview.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables/propertyview.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/timestamp [ 36%] Built target OpenMMInput_autogen make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/qtplugins/select/select.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/select/select.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/SelectPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/select/select.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select/select.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/SelectPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/SelectPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_conformersearchdialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp.d" [ 36%] Built target PLY_autogen make -f avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen.dir/build.make avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc.d" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen.dir/build.make avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen.dir/build AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp.d" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/AutogenUsed.txt" [ 36%] Automatic MOC for target Vibrations cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/timestamp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen.dir/AutogenInfo.json None [ 36%] Automatic MOC for target SpaceGroup cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/AutogenInfo.json None make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc.d" [ 36%] Built target POVRay_autogen make -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/DependInfo.cmake "--color=" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/vibrations/vibrationdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/vibrations/vibrationmodel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/vibrations/vibrations.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/vibrations/vibrations.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/vibrations/vibrationmodel.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/VibrationsPlugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/vibrations/vibrationdialog.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/EWIEGA46WW/moc_vibrationdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/vibrations/vibrationdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/EWIEGA46WW/moc_vibrationdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations/vibrationdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/EWIEGA46WW/moc_vibrations.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/vibrations/vibrations.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/EWIEGA46WW/moc_vibrations.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations/vibrations.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/include/VibrationsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/VibrationsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/include/VibrationsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/VibrationsPlugin.cpp AutoGen: Parsing "SRC:/avogadro/qtplugins/spacegroup/spacegroup.h" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build AutoGen: Parsing "SRC:/avogadro/qtplugins/spacegroup/spacegroup.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/spacegroup/spacegroup.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup/spacegroup.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc.d" [ 36%] Automatic MOC for target VRML cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp.d" AutoGen: Parsing "SRC:/avogadro/qtplugins/vrml/vrml.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/vrml/vrml.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRMLPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/vrml/vrml.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml/vrml.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRMLPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRMLPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/timestamp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/include/VibrationsPlugin.moc.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/EWIEGA46WW/moc_vibrations.cpp.d" [ 36%] Built target SpaceGroup_autogen make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/deps" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp.d" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp.d" [ 36%] Built target PropertyTables_autogen make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/deps" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/ParseCache.txt" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/DependInfo.cmake "--color=" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/AutogenUsed.txt" [ 36%] Automatic MOC for target CoordinateEditor cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenInfo.json None cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/AutogenUsed.txt" [ 36%] Built target OpenBabel_autogen cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/timestamp make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/depend AutoGen: Refreshing parse cache because it doesn't exist. make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.cpp" make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Built target Select_autogen make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor/coordinateeditor.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp [ 36%] Automatic MOC for target Forcefield cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/AutogenInfo.json None make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/depend [ 36%] Built target VRML_autogen make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/DependInfo.cmake "--color=" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefield.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/obmmenergy.h" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Automatic MOC for target InsertFragment cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/scriptenergy.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/obmmenergy.cpp" [ 36%] Automatic MOC for target commands AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefield.cpp" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/scriptenergy.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp" AutoMoc warning --------------- "SRC:/avogadro/qtplugins/forcefield/obmmenergy.cpp" includes the moc file "obmmenergy.moc", but does not contain a Q_OBJECT, Q_GADGET, Q_NAMESPACE or Q_NAMESPACE_EXPORT macro. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Refreshing parse cache because it doesn't exist. make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/forcefield.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/forcefield.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/forcefielddialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/obmmenergy.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/obmmenergy.cpp AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragment.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragment.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/commandscripts/command.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/commandscripts/command.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commandsPlugin.cpp" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/EWIEGA46WW/moc_vibrationdialog.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertfragment/insertfragment.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment/insertfragment.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/commandscripts/command.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts/command.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commandsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commandsPlugin.cpp [ 36%] Automatic MOC for target MolecularProperties AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/deps" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/AutogenInfo.json None AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/CMakeFiles/Vibrations_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/timestamp AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties/molecularproperties.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp [ 36%] Built target Vibrations_autogen make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp.d" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp.d" [ 36%] Automatic MOC for target ScriptCharges cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/AutogenInfo.json None AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp.d" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/deps" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/deps" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc.d" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Built target CoordinateEditor_autogen make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptchargemodel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.cpp" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Automatic MOC for target ScriptFileFormats cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenInfo.json None AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges/scriptcharges.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc.d" [ 36%] Built target commands_autogen AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp.d" make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/fileformatscript.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/fileformatscript.cpp" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/AutogenUsed.txt" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats/scriptfileformats.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc.d" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/timestamp AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/deps" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Automatic MOC for target PluginDownloader cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/AutogenInfo.json None AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp.d" [ 36%] Built target MolecularProperties_autogen make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/DependInfo.cmake "--color=" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu [ 36%] Built target InsertFragment_autogen make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/zipextracter.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/zipextracter.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp" make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader/downloaderwidget.h make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader/plugindownloader.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/AutogenUsed.txt" [ 36%] Automatic MOC for target BallStick cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenInfo.json None cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Automatic MOC for target CloseContacts AutoGen: Parsing "SRC:/avogadro/qtplugins/ballandstick/ballandstick.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/ballandstick/ballandstick.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/AutogenInfo.json None AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/ballandstick/ballandstick.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick/ballandstick.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp [ 36%] Built target ScriptCharges_autogen make -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/timestamp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/DependInfo.cmake "--color=" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/closecontacts/closecontacts.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/closecontacts/closecontacts.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp" [ 36%] Built target ScriptFileFormats_autogen make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/depend AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/closecontacts/closecontacts.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts/closecontacts.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/DependInfo.cmake "--color=" AutoMoc: /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/obmmenergy.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/AutogenUsed.txt" [ 36%] Automatic MOC for target Force cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/timestamp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/AutogenInfo.json None make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp.d" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Refreshing parse cache because it doesn't exist. [ 36%] Automatic MOC for target Licorice cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenInfo.json None AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 36%] Built target Forcefield_autogen make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc.d" [ 36%] Automatic MOC for target Meshes cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/licorice/licorice.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/licorice/licorice.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/LicoricePlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/licorice/licorice.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice/licorice.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/LicoricePlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/LicoricePlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp.d" AutoGen: Parsing "SRC:/avogadro/qtplugins/force/force.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/force/force.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/ForcePlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/force/force.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force/force.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/ForcePlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/ForcePlugin.cpp AutoGen: Parsing "SRC:/avogadro/qtplugins/meshes/meshes.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/meshes/meshes.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/MeshesPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/meshes/meshes.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes/meshes.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/MeshesPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/MeshesPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenUsed.txt" [ 36%] Built target PluginDownloader_autogen cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/timestamp make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Built target BallStick_autogen make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/DependInfo.cmake "--color=" make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/ParseCache.txt" [ 36%] Automatic MOC for target NonCovalent AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenUsed.txt" [ 36%] Automatic MOC for target VanDerWaals cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/AutogenInfo.json None cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/timestamp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.cpp" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc.d" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/AutogenUsed.txt" [ 36%] Built target Licorice_autogen AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals/vanderwaals.h make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/depend AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/timestamp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/DependInfo.cmake "--color=" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/noncovalent/noncovalent.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/noncovalent/noncovalent.cpp" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/deps" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/noncovalent/noncovalent.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent/noncovalent.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/AutogenUsed.txt" make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/timestamp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Built target Force_autogen AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc.d" make -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 36%] Automatic MOC for target Wireframe make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/AutogenInfo.json None [ 36%] Built target CloseContacts_autogen make -f avogadro/molequeue/CMakeFiles/MoleQueue.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue.dir/depend AutoGen: Refreshing parse cache because it doesn't exist. make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 36%] Generating ui_molequeuewidget.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/ui_molequeuewidget.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuewidget.ui [ 36%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/mocs_compilation.cpp AutoGen: Parsing "SRC:/avogadro/qtplugins/wireframe/wireframe.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/wireframe/wireframe.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/WireframePlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/wireframe/wireframe.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe/wireframe.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/WireframePlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/WireframePlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/ParseCache.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc.d" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/AutogenUsed.txt" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/deps" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/timestamp AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/AutogenUsed.txt" [ 37%] Generating ui_inputgeneratordialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/timestamp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/ui_inputgeneratordialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratordialog.ui make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 37%] Built target Meshes_autogen make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/depend [ 37%] Built target VanDerWaals_autogen [ 37%] Generating ui_inputgeneratorwidget.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/ui_inputgeneratorwidget.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratorwidget.ui make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp.d" [ 37%] Generating ui_chargedialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ui_chargedialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors/chargedialog.ui [ 37%] Generating ui_3dmoldialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ui_3dmoldialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol/3dmoldialog.ui [ 37%] Generating ui_molequeuedialog.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/deps" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/ui_molequeuedialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuedialog.ui AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/DependInfo.cmake "--color=" [ 37%] Built target NonCovalent_autogen make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/depend cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/CMakeFiles/MoleQueue.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/deps" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 37%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o [ 38%] Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o make -f avogadro/molequeue/CMakeFiles/MoleQueue.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue.dir/build cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/mocs_compilation.cpp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/mocs_compilation.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/timestamp [ 38%] Generating ui_bondingdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/ui_bondingdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding/bondingdialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/DependInfo.cmake "--color=" [ 38%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o -MF CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/mocs_compilation.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 38%] Built target Wireframe_autogen make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/DependInfo.cmake "--color=" [ 38%] Building CXX object avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/mocs_compilation.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 38%] Building CXX object avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/mocs_compilation.cpp [ 38%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/applycolors.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/applycolors.cpp.o -MF CMakeFiles/ApplyColors.dir/applycolors.cpp.o.d -o CMakeFiles/ApplyColors.dir/applycolors.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors/applycolors.cpp [ 38%] Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o -MF CMakeFiles/ThreeDMol.dir/3dmol.cpp.o.d -o CMakeFiles/ThreeDMol.dir/3dmol.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol/3dmol.cpp [ 38%] Building CXX object avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/cartoons.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/cartoons.cpp.o -MF CMakeFiles/Cartoons.dir/cartoons.cpp.o.d -o CMakeFiles/Cartoons.dir/cartoons.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons/cartoons.cpp [ 38%] Building CXX object avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/bonding.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/bonding.cpp.o -MF CMakeFiles/Bonding.dir/bonding.cpp.o.d -o CMakeFiles/Bonding.dir/bonding.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding/bonding.cpp [ 38%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/batchjob.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/batchjob.cpp.o -MF CMakeFiles/MoleQueue.dir/batchjob.cpp.o.d -o CMakeFiles/MoleQueue.dir/batchjob.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/batchjob.cpp [ 38%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui 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Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o -MF CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o.d -o CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol/3dmoldialog.cpp [ 39%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o -MF CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o.d -o CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgenerator.cpp [ 39%] Building CXX object avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/BondingPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bonding -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/Bonding_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/BondingPlugin.cpp.o -MF CMakeFiles/Bonding.dir/BondingPlugin.cpp.o.d -o CMakeFiles/Bonding.dir/BondingPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding/BondingPlugin.cpp [ 39%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/glwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/glwidget.cpp.o -MF CMakeFiles/QtOpenGL.dir/glwidget.cpp.o.d -o CMakeFiles/QtOpenGL.dir/glwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/glwidget.cpp [ 39%] Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/3dmol -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o -MF CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o.d -o CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp [ 39%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/applycolors -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o -MF CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o.d -o CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp [ 39%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Bonding.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding && /usr/bin/cmake -P CMakeFiles/Bonding.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bonding && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bonding.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Bonding.a CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o CMakeFiles/Bonding.dir/bonding.cpp.o CMakeFiles/Bonding.dir/BondingPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Bonding.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 39%] Built target Bonding make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 40%] Building CXX object avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/mocs_compilation.cpp [ 40%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ThreeDMol.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/bin/cmake -P CMakeFiles/ThreeDMol.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/3dmol && /usr/bin/cmake -E cmake_link_script CMakeFiles/ThreeDMol.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ThreeDMol.a CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o CMakeFiles/ThreeDMol.dir/3dmol.cpp.o CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ThreeDMol.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 40%] Built target ThreeDMol make -f avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/build.make avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 40%] Building CXX object avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/centroid.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/centroid.cpp.o -MF CMakeFiles/Centroid.dir/centroid.cpp.o.d -o CMakeFiles/Centroid.dir/centroid.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid/centroid.cpp [ 40%] Generating ui_configurepythondialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ui_configurepythondialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython/configurepythondialog.ui [ 40%] Generating ui_condadialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ui_condadialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython/condadialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/build.make avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 40%] Building CXX object avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/ConfigurePython_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/ConfigurePython_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ConfigurePython.dir/ConfigurePython_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ConfigurePython.dir/ConfigurePython_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/mocs_compilation.cpp [ 40%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ApplyColors.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors && /usr/bin/cmake -P CMakeFiles/ApplyColors.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/applycolors && /usr/bin/cmake -E cmake_link_script CMakeFiles/ApplyColors.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ApplyColors.a CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o CMakeFiles/ApplyColors.dir/applycolors.cpp.o CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ApplyColors.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 40%] Built target ApplyColors make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 40%] Building CXX object avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/mocs_compilation.cpp [ 40%] Building CXX object avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cartoons -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/Cartoons_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o -MF CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o.d -o CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp [ 40%] Building CXX object avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/copypaste.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/copypaste.cpp.o -MF CMakeFiles/CopyPaste.dir/copypaste.cpp.o.d -o CMakeFiles/CopyPaste.dir/copypaste.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste/copypaste.cpp [ 41%] Building CXX object avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/condadialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/condadialog.cpp.o -MF CMakeFiles/ConfigurePython.dir/condadialog.cpp.o.d -o CMakeFiles/ConfigurePython.dir/condadialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython/condadialog.cpp [ 41%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Cartoons.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons && /usr/bin/cmake -P CMakeFiles/Cartoons.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cartoons && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cartoons.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Cartoons.a CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o CMakeFiles/Cartoons.dir/cartoons.cpp.o CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Cartoons.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 41%] Built target Cartoons make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 41%] Generating ui_volumescalingdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/ui_volumescalingdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/volumescalingdialog.ui [ 42%] Generating ui_importcrystaldialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/ui_importcrystaldialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/importcrystaldialog.ui [ 42%] Generating ui_supercelldialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/ui_supercelldialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/supercelldialog.ui [ 42%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o [ 42%] Generating ui_unitcelldialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/ui_unitcelldialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/unitcelldialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o -MF CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o.d -o CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratordialog.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 42%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/mocs_compilation.cpp [ 42%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl/QtOpenGL_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o -MF CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o.d -o CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/qttextrenderstrategy.cpp [ 42%] Building CXX object avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/configurepython.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/configurepython.cpp.o -MF CMakeFiles/ConfigurePython.dir/configurepython.cpp.o.d -o CMakeFiles/ConfigurePython.dir/configurepython.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython/configurepython.cpp [ 42%] Building CXX object avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/centroid -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/Centroid_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o -MF CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o.d -o CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid/CentroidPlugin.cpp [ 42%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Centroid.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid && /usr/bin/cmake -P CMakeFiles/Centroid.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/centroid && /usr/bin/cmake -E cmake_link_script CMakeFiles/Centroid.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Centroid.a CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o CMakeFiles/Centroid.dir/centroid.cpp.o CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Centroid.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 42%] Built target Centroid make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 43%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/mocs_compilation.cpp [ 43%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o -MF CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o.d -o CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratorwidget.cpp [ 43%] Building CXX object avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/configurepythondialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/configurepythondialog.cpp.o -MF CMakeFiles/ConfigurePython.dir/configurepythondialog.cpp.o.d -o CMakeFiles/ConfigurePython.dir/configurepythondialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython/configurepythondialog.cpp [ 43%] Linking CXX shared library ../../lib/libAvogadroQtOpenGL.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl && /usr/bin/cmake -E cmake_link_script CMakeFiles/QtOpenGL.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libAvogadroQtOpenGL.so.1 -o ../../lib/libAvogadroQtOpenGL.so.1.99.0 CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o CMakeFiles/QtOpenGL.dir/glwidget.cpp.o CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o ../../lib/libAvogadroRendering.so.1.99.0 ../../lib/libAvogadroQtGui.so.1.99.0 ../../lib/libAvogadroIO.so.1.99.0 ../../lib/libAvogadroCore.so.1.99.0 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtOpenGL.so.1.99.0 ../../lib/libAvogadroQtOpenGL.so.1 ../../lib/libAvogadroQtOpenGL.so make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 43%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o -MF CMakeFiles/Crystal.dir/crystal.cpp.o.d -o CMakeFiles/Crystal.dir/crystal.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/crystal.cpp [ 43%] Built target QtOpenGL make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 44%] Building CXX object avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/mocs_compilation.cpp [ 44%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/crystalscene.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/crystalscene.cpp.o -MF CMakeFiles/CrystalScene.dir/crystalscene.cpp.o.d -o CMakeFiles/CrystalScene.dir/crystalscene.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/crystalscene.cpp [ 44%] Building CXX object avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/copypaste -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o -MF CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o.d -o CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp [ 44%] Building CXX object avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/customelements.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/customelements.cpp.o -MF CMakeFiles/CustomElements.dir/customelements.cpp.o.d -o CMakeFiles/CustomElements.dir/customelements.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements/customelements.cpp [ 44%] Building CXX object avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/ConfigurePythonPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/configurepython -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePython_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/configurepython/CMakeFiles/ConfigurePython.dir/ConfigurePythonPlugin.cpp.o -MF CMakeFiles/ConfigurePython.dir/ConfigurePythonPlugin.cpp.o.d -o CMakeFiles/ConfigurePython.dir/ConfigurePythonPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython/ConfigurePythonPlugin.cpp [ 44%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CopyPaste.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste && /usr/bin/cmake -P CMakeFiles/CopyPaste.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/copypaste && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopyPaste.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CopyPaste.a CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o CMakeFiles/CopyPaste.dir/copypaste.cpp.o CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CopyPaste.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 44%] Built target CopyPaste make -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/editor/CMakeFiles/Editor_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 44%] Built target Editor_autogen_timestamp_deps make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 44%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o -MF CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/mocs_compilation.cpp [ 44%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ConfigurePython.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/cmake -P CMakeFiles/ConfigurePython.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/configurepython && /usr/bin/cmake -E cmake_link_script CMakeFiles/ConfigurePython.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ConfigurePython.a CMakeFiles/ConfigurePython.dir/ConfigurePython_autogen/mocs_compilation.cpp.o CMakeFiles/ConfigurePython.dir/condadialog.cpp.o CMakeFiles/ConfigurePython.dir/configurepython.cpp.o CMakeFiles/ConfigurePython.dir/configurepythondialog.cpp.o CMakeFiles/ConfigurePython.dir/ConfigurePythonPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ConfigurePython.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 44%] Built target ConfigurePython make -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/focus/CMakeFiles/Focus_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 44%] Built target Focus_autogen_timestamp_deps make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 44%] Building CXX object avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/mocs_compilation.cpp [ 44%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o -MF CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o.d -o CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb/fetchpdb.cpp [ 44%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuedialog.cpp [ 44%] Building CXX object avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/customelements -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElements_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o -MF CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o.d -o CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp [ 44%] Building CXX object avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/hydrogens.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/hydrogens.cpp.o -MF CMakeFiles/Hydrogens.dir/hydrogens.cpp.o.d -o CMakeFiles/Hydrogens.dir/hydrogens.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens/hydrogens.cpp [ 45%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o -MF CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o.d -o CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/importcrystaldialog.cpp [ 45%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScene_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o -MF CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o.d -o CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp [ 45%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CustomElements.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements && /usr/bin/cmake -P CMakeFiles/CustomElements.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/customelements && /usr/bin/cmake -E cmake_link_script CMakeFiles/CustomElements.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CustomElements.a CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o CMakeFiles/CustomElements.dir/customelements.cpp.o CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CustomElements.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 45%] Built target CustomElements make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 45%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuemanager.cpp [ 45%] Generating ui_pqrwidget.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ui_pqrwidget.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr/pqrwidget.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 45%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/mocs_compilation.cpp [ 45%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/fetchpdb -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o -MF CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o.d -o CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp [ 45%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.cpp [ 46%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/importpqr.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/importpqr.cpp.o -MF CMakeFiles/ImportPQR.dir/importpqr.cpp.o.d -o CMakeFiles/ImportPQR.dir/importpqr.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr/importpqr.cpp [ 46%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CrystalScene.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/cmake -P CMakeFiles/CrystalScene.dir/cmake_clean_target.cmake [ 46%] Building CXX object avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/hydrogens -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o -MF CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o.d -o CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_link_script CMakeFiles/CrystalScene.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CrystalScene.a CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o CMakeFiles/CrystalScene.dir/crystalscene.cpp.o CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CrystalScene.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 46%] Built target CrystalScene make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 46%] Generating ui_insertdnadialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/ui_insertdnadialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna/insertdnadialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 46%] Building CXX object avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/mocs_compilation.cpp [ 46%] Linking CXX static library ../../../lib/avogadro2/staticplugins/FetchPDB.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -P CMakeFiles/FetchPDB.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/FetchPDB.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/FetchPDB.a CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/FetchPDB.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 46%] Built target FetchPDB make -f avogadro/qtplugins/label/CMakeFiles/Label.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/Label.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/label/CMakeFiles/Label.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 46%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/mocs_compilation.cpp [ 46%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o -MF CMakeFiles/Crystal.dir/supercelldialog.cpp.o.d -o CMakeFiles/Crystal.dir/supercelldialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/supercelldialog.cpp [ 47%] Building CXX object avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/insertdna.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/insertdna.cpp.o -MF CMakeFiles/NucleicInput.dir/insertdna.cpp.o.d -o CMakeFiles/NucleicInput.dir/insertdna.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna/insertdna.cpp [ 47%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Hydrogens.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens && /usr/bin/cmake -P CMakeFiles/Hydrogens.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/hydrogens && /usr/bin/cmake -E cmake_link_script CMakeFiles/Hydrogens.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Hydrogens.a CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o CMakeFiles/Hydrogens.dir/hydrogens.cpp.o CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Hydrogens.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 47%] Built target Hydrogens make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 47%] Built target LabelEditor_autogen_timestamp_deps make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 47%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuewidget.cpp [ 47%] Generating ui_lammpsinputdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/ui_lammpsinputdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui: Warning: Tab-stop assignment: 'moreButton' is not a valid widget. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui: Warning: Tab-stop assignment: 'previewText' is not a valid widget. cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 47%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/mocs_compilation.cpp [ 48%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/label.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/label.cpp.o -MF CMakeFiles/Label.dir/label.cpp.o.d -o CMakeFiles/Label.dir/label.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label/label.cpp [ 48%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o -MF CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o.d -o CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr/pqrwidget.cpp [ 49%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o -MF CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o.d -o CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput/lammpsinputdialog.cpp [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o -MF CMakeFiles/Crystal.dir/unitcelldialog.cpp.o.d -o CMakeFiles/Crystal.dir/unitcelldialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/unitcelldialog.cpp [ 50%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/client.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/client.cpp.o -MF CMakeFiles/MoleQueue.dir/client/client.cpp.o.d -o CMakeFiles/MoleQueue.dir/client/client.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.cpp [ 50%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o -MF CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o.d -o CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr/pqrrequest.cpp [ 50%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o -MF CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o.d -o CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jobobject.cpp [ 50%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/LabelPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/Label_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/LabelPlugin.cpp.o -MF CMakeFiles/Label.dir/LabelPlugin.cpp.o.d -o CMakeFiles/Label.dir/LabelPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelPlugin.cpp [ 50%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/c++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue/MoleQueue_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o -MF CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o.d -o CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jsonrpcclient.cpp [ 50%] Building CXX object avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertdna -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o -MF CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o.d -o CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp [ 50%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o -MF CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o.d -o CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput/lammpsinput.cpp [ 50%] Linking CXX shared library ../../lib/libAvogadroMoleQueue.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/cmake -E cmake_link_script CMakeFiles/MoleQueue.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libAvogadroMoleQueue.so.1 -o ../../lib/libAvogadroMoleQueue.so.1.99.0 CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o CMakeFiles/MoleQueue.dir/batchjob.cpp.o CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o CMakeFiles/MoleQueue.dir/client/client.cpp.o CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o ../../lib/libAvogadroQtGui.so.1.99.0 ../../lib/libAvogadroIO.so.1.99.0 ../../lib/libAvogadroCore.so.1.99.0 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 [ 50%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Label.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/cmake -P CMakeFiles/Label.dir/cmake_clean_target.cmake [ 50%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o -MF CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o.d -o CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal/volumescalingdialog.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_link_script CMakeFiles/Label.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Label.a CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o CMakeFiles/Label.dir/label.cpp.o CMakeFiles/Label.dir/LabelPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Label.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 50%] Built target Label make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/depend cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroMoleQueue.so.1.99.0 ../../lib/libAvogadroMoleQueue.so.1 ../../lib/libAvogadroMoleQueue.so make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 50%] Linking CXX static library ../../../lib/avogadro2/staticplugins/NucleicInput.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna && /usr/bin/cmake -P CMakeFiles/NucleicInput.dir/cmake_clean_target.cmake make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 50%] Generating ui_lineformatinputdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/ui_lineformatinputdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput/lineformatinputdialog.ui [ 50%] Built target MoleQueue make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen_timestamp_deps.dir/depend cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertdna && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicInput.dir/link.txt --verbose=1 make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen_timestamp_deps.dir/build [ 50%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/mocs_compilation.cpp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/NucleicInput.a CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o CMakeFiles/NucleicInput.dir/insertdna.cpp.o CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o [ 50%] Built target Manipulator_autogen_timestamp_deps make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen_timestamp_deps.dir/depend /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/NucleicInput.a make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 50%] Built target NucleicInput make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" [ 50%] Built target MeasureTool_autogen_timestamp_deps make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 50%] Built target Navigator_autogen_timestamp_deps make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/depend [ 50%] Building CXX object avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o -MF CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/mocs_compilation.cpp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 50%] Generating ui_obforcefielddialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/ui_obforcefielddialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obforcefielddialog.ui [ 50%] Generating ui_conformersearchdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/ui_conformersearchdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/conformersearchdialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 51%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/mocs_compilation.cpp [ 52%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o -MF CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o.d -o CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput/lineformatinput.cpp [ 52%] Building CXX object avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o -MF CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases/networkdatabases.cpp [ 52%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/crystal -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/Crystal_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o -MF CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o.d -o CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal/CrystalPlugin.cpp [ 52%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/importpqr -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o -MF CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o.d -o CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp [ 52%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/conformersearchdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/conformersearchdialog.cpp.o -MF CMakeFiles/OpenBabel.dir/conformersearchdialog.cpp.o.d -o CMakeFiles/OpenBabel.dir/conformersearchdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/conformersearchdialog.cpp [ 52%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Crystal.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/cmake -P CMakeFiles/Crystal.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_link_script CMakeFiles/Crystal.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Crystal.a CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o CMakeFiles/Crystal.dir/crystal.cpp.o CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o CMakeFiles/Crystal.dir/supercelldialog.cpp.o CMakeFiles/Crystal.dir/unitcelldialog.cpp.o CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Crystal.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 52%] Built target Crystal make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 52%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ImportPQR.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/cmake -P CMakeFiles/ImportPQR.dir/cmake_clean_target.cmake [ 52%] Generating ui_openmminputdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/ui_openmminputdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput/openmminputdialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/importpqr && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImportPQR.dir/link.txt --verbose=1 cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/DependInfo.cmake "--color=" [ 52%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lammpsinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o -MF CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o.d -o CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ImportPQR.a CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o CMakeFiles/ImportPQR.dir/importpqr.cpp.o CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ImportPQR.a make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 52%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/mocs_compilation.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 52%] Built target ImportPQR make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 52%] Built target PlayerTool_autogen_timestamp_deps make -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/CMakeFiles/PLY.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 52%] Building CXX object avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/mocs_compilation.cpp [ 52%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obcharges.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obcharges.cpp.o -MF CMakeFiles/OpenBabel.dir/obcharges.cpp.o.d -o CMakeFiles/OpenBabel.dir/obcharges.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obcharges.cpp [ 52%] Linking CXX static library ../../../lib/avogadro2/staticplugins/LammpsInput.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -P CMakeFiles/LammpsInput.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/LammpsInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LammpsInput.a CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/LammpsInput.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 52%] Building CXX object avogadro/qtplugins/ply/CMakeFiles/PLY.dir/ply.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ply/CMakeFiles/PLY.dir/ply.cpp.o -MF CMakeFiles/PLY.dir/ply.cpp.o.d -o CMakeFiles/PLY.dir/ply.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply/ply.cpp [ 52%] Built target LammpsInput make -f avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 52%] Building CXX object avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o -MF CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/mocs_compilation.cpp [ 52%] Building CXX object avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/networkdatabases -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o -MF CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp [ 53%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o -MF CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o.d -o CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput/openmminputdialog.cpp [ 53%] Building CXX object avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/povray.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/povray.cpp.o -MF CMakeFiles/POVRay.dir/povray.cpp.o.d -o CMakeFiles/POVRay.dir/povray.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray/povray.cpp [ 53%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o -MF CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o.d -o CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput/lineformatinputdialog.cpp [ 53%] Linking CXX static library ../../../lib/avogadro2/staticplugins/NetworkDatabases.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -P CMakeFiles/NetworkDatabases.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E cmake_link_script CMakeFiles/NetworkDatabases.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/NetworkDatabases.a CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/NetworkDatabases.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 53%] Built target NetworkDatabases make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 53%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/mocs_compilation.cpp [ 53%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/lineformatinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o -MF CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o.d -o CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp [ 53%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obfileformat.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obfileformat.cpp.o -MF CMakeFiles/OpenBabel.dir/obfileformat.cpp.o.d -o CMakeFiles/OpenBabel.dir/obfileformat.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obfileformat.cpp [ 53%] Linking CXX static library ../../../lib/avogadro2/staticplugins/LineFormatInput.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -P CMakeFiles/LineFormatInput.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineFormatInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LineFormatInput.a CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/LineFormatInput.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 53%] Built target LineFormatInput make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" [ 53%] Building CXX object avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLYPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ply -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLY_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLYPlugin.cpp.o -MF CMakeFiles/PLY.dir/PLYPlugin.cpp.o.d -o CMakeFiles/PLY.dir/PLYPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply/PLYPlugin.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 53%] Built target ResetView_autogen_timestamp_deps make -f avogadro/qtplugins/select/CMakeFiles/Select.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/CMakeFiles/Select.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/select/CMakeFiles/Select.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 53%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/mocs_compilation.cpp [ 53%] Building CXX object avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/povray -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRay_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o -MF CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o.d -o CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray/POVRayPlugin.cpp [ 54%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PLY.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply && /usr/bin/cmake -P CMakeFiles/PLY.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ply && /usr/bin/cmake -E cmake_link_script CMakeFiles/PLY.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PLY.a CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o CMakeFiles/PLY.dir/ply.cpp.o CMakeFiles/PLY.dir/PLYPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PLY.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 54%] Built target PLY make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 54%] Built target Selection_autogen_timestamp_deps make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/DependInfo.cmake "--color=" [ 54%] Linking CXX static library ../../../lib/avogadro2/staticplugins/POVRay.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray && /usr/bin/cmake -P CMakeFiles/POVRay.dir/cmake_clean_target.cmake make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 54%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/povray && /usr/bin/cmake -E cmake_link_script CMakeFiles/POVRay.dir/link.txt --verbose=1 cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/mocs_compilation.cpp /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/POVRay.a CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o CMakeFiles/POVRay.dir/povray.cpp.o CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/POVRay.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 54%] Built target POVRay make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 54%] Built target Surfaces_autogen_timestamp_deps make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 54%] Built target TemplateTool_autogen_timestamp_deps make -f avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/build.make avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 55%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/select.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/select.cpp.o -MF CMakeFiles/Select.dir/select.cpp.o.d -o CMakeFiles/Select.dir/select.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select/select.cpp [ 55%] Generating ui_vibrationdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/ui_vibrationdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations/vibrationdialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/build.make avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 55%] Building CXX object avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/Vibrations_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/Vibrations_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Vibrations.dir/Vibrations_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Vibrations.dir/Vibrations_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/mocs_compilation.cpp [ 55%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminput.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminput.cpp.o -MF CMakeFiles/OpenMMInput.dir/openmminput.cpp.o.d -o CMakeFiles/OpenMMInput.dir/openmminput.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput/openmminput.cpp [ 55%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertytables.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertytables.cpp.o -MF CMakeFiles/PropertyTables.dir/propertytables.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertytables.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables/propertytables.cpp [ 55%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o -MF CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o.d -o CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup/spacegroup.cpp [ 55%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o -MF CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o.d -o CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obforcefielddialog.cpp [ 55%] Building CXX object avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/vibrationdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/vibrationdialog.cpp.o -MF CMakeFiles/Vibrations.dir/vibrationdialog.cpp.o.d -o CMakeFiles/Vibrations.dir/vibrationdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations/vibrationdialog.cpp [ 55%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openmminput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o -MF CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o.d -o CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp [ 55%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/SelectPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/select -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/Select_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/SelectPlugin.cpp.o -MF CMakeFiles/Select.dir/SelectPlugin.cpp.o.d -o CMakeFiles/Select.dir/SelectPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select/SelectPlugin.cpp [ 55%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obprocess.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obprocess.cpp.o -MF CMakeFiles/OpenBabel.dir/obprocess.cpp.o.d -o CMakeFiles/OpenBabel.dir/obprocess.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/obprocess.cpp [ 55%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertymodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertymodel.cpp.o -MF CMakeFiles/PropertyTables.dir/propertymodel.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertymodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables/propertymodel.cpp [ 55%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/spacegroup -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o -MF CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o.d -o CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp [ 55%] Linking CXX static library ../../../lib/avogadro2/staticplugins/OpenMMInput.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/bin/cmake -P CMakeFiles/OpenMMInput.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openmminput && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMInput.dir/link.txt --verbose=1 [ 56%] Building CXX object avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/vibrationmodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/vibrationmodel.cpp.o -MF CMakeFiles/Vibrations.dir/vibrationmodel.cpp.o.d -o CMakeFiles/Vibrations.dir/vibrationmodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations/vibrationmodel.cpp /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/OpenMMInput.a CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o CMakeFiles/OpenMMInput.dir/openmminput.cpp.o CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/OpenMMInput.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 56%] Built target OpenMMInput make -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 57%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o -MF CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/mocs_compilation.cpp [ 57%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/vrml.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/vrml.cpp.o -MF CMakeFiles/VRML.dir/vrml.cpp.o.d -o CMakeFiles/VRML.dir/vrml.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml/vrml.cpp [ 57%] Linking CXX static library ../../../lib/avogadro2/staticplugins/SpaceGroup.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup && /usr/bin/cmake -P CMakeFiles/SpaceGroup.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpaceGroup.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/SpaceGroup.a CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/SpaceGroup.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 57%] Built target SpaceGroup make -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 57%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Select.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select && /usr/bin/cmake -P CMakeFiles/Select.dir/cmake_clean_target.cmake [ 57%] Built target apbs_autogen_timestamp_deps make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/select && /usr/bin/cmake -E cmake_link_script CMakeFiles/Select.dir/link.txt --verbose=1 [ 58%] Generating ui_coordinateeditordialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/ui_coordinateeditordialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.ui /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Select.a CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o CMakeFiles/Select.dir/select.cpp.o CMakeFiles/Select.dir/SelectPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Select.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 58%] Built target Select make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" [ 58%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/mocs_compilation.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 58%] Built target Cp2kInput_autogen_timestamp_deps make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 58%] Generating ui_forcefielddialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/ui_forcefielddialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/forcefielddialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 58%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/mocs_compilation.cpp [ 59%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/openbabel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/openbabel.cpp.o -MF CMakeFiles/OpenBabel.dir/openbabel.cpp.o.d -o CMakeFiles/OpenBabel.dir/openbabel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel/openbabel.cpp [ 59%] Building CXX object avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/vibrations.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/vibrations.cpp.o -MF CMakeFiles/Vibrations.dir/vibrations.cpp.o.d -o CMakeFiles/Vibrations.dir/vibrations.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations/vibrations.cpp [ 59%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o -MF CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor/coordinateeditor.cpp [ 60%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefield.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefield.cpp.o -MF CMakeFiles/Forcefield.dir/forcefield.cpp.o.d -o CMakeFiles/Forcefield.dir/forcefield.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/forcefield.cpp [ 60%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRMLPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vrml -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRML_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRMLPlugin.cpp.o -MF CMakeFiles/VRML.dir/VRMLPlugin.cpp.o.d -o CMakeFiles/VRML.dir/VRMLPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml/VRMLPlugin.cpp [ 60%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o -MF CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp [ 60%] Linking CXX static library ../../../lib/avogadro2/staticplugins/VRML.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml && /usr/bin/cmake -P CMakeFiles/VRML.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vrml && /usr/bin/cmake -E cmake_link_script CMakeFiles/VRML.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/VRML.a CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o CMakeFiles/VRML.dir/vrml.cpp.o CMakeFiles/VRML.dir/VRMLPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/VRML.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 60%] Built target VRML make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 60%] Built target GamessInput_autogen_timestamp_deps make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 61%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o -MF CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/mocs_compilation.cpp [ 61%] Building CXX object avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/VibrationsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vibrations -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/Vibrations_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vibrations/CMakeFiles/Vibrations.dir/VibrationsPlugin.cpp.o -MF CMakeFiles/Vibrations.dir/VibrationsPlugin.cpp.o.d -o CMakeFiles/Vibrations.dir/VibrationsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations/VibrationsPlugin.cpp [ 61%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragment.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragment.cpp.o -MF CMakeFiles/InsertFragment.dir/insertfragment.cpp.o.d -o CMakeFiles/InsertFragment.dir/insertfragment.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment/insertfragment.cpp [ 61%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Vibrations.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/cmake -P CMakeFiles/Vibrations.dir/cmake_clean_target.cmake [ 62%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertyview.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertyview.cpp.o -MF CMakeFiles/PropertyTables.dir/propertyview.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertyview.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables/propertyview.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vibrations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Vibrations.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Vibrations.a CMakeFiles/Vibrations.dir/Vibrations_autogen/mocs_compilation.cpp.o CMakeFiles/Vibrations.dir/vibrationdialog.cpp.o CMakeFiles/Vibrations.dir/vibrationmodel.cpp.o CMakeFiles/Vibrations.dir/vibrations.cpp.o CMakeFiles/Vibrations.dir/VibrationsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Vibrations.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 62%] Built target Vibrations make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 62%] Generating ui_molecularpropertiesdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/ui_molecularpropertiesdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 63%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o -MF CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/mocs_compilation.cpp [ 63%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o -MF CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o.d -o CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties/molecularproperties.cpp [ 63%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/openbabel -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o -MF CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o.d -o CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp [ 63%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o -MF CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor/coordinatetextedit.cpp [ 63%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o -MF CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o.d -o CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/forcefielddialog.cpp [ 63%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/coordinateeditor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o -MF CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp [ 63%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o -MF CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o.d -o CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.cpp [ 63%] Linking CXX static library ../../../lib/avogadro2/staticplugins/OpenBabel.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/cmake -P CMakeFiles/OpenBabel.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/openbabel && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenBabel.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/OpenBabel.a CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o CMakeFiles/OpenBabel.dir/conformersearchdialog.cpp.o CMakeFiles/OpenBabel.dir/obcharges.cpp.o CMakeFiles/OpenBabel.dir/obfileformat.cpp.o CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o CMakeFiles/OpenBabel.dir/obprocess.cpp.o CMakeFiles/OpenBabel.dir/openbabel.cpp.o CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/OpenBabel.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 63%] Built target OpenBabel make -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/svg/CMakeFiles/SVG_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 63%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/insertfragment -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o -MF CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o.d -o CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp [ 63%] Built target SVG_autogen_timestamp_deps make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 63%] Building CXX object avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o -MF CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/mocs_compilation.cpp [ 63%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/propertytables -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o -MF CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o.d -o CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp [ 63%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/obmmenergy.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/obmmenergy.cpp.o -MF CMakeFiles/Forcefield.dir/obmmenergy.cpp.o.d -o CMakeFiles/Forcefield.dir/obmmenergy.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/obmmenergy.cpp [ 64%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CoordinateEditor.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -P CMakeFiles/CoordinateEditor.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E cmake_link_script CMakeFiles/CoordinateEditor.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CoordinateEditor.a CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CoordinateEditor.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 64%] Built target CoordinateEditor make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" [ 64%] Linking CXX static library ../../../lib/avogadro2/staticplugins/InsertFragment.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment && /usr/bin/cmake -P CMakeFiles/InsertFragment.dir/cmake_clean_target.cmake make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E cmake_link_script CMakeFiles/InsertFragment.dir/link.txt --verbose=1 [ 64%] Built target QuantumInput_autogen_timestamp_deps make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/DependInfo.cmake "--color=" /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/InsertFragment.a CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o CMakeFiles/InsertFragment.dir/insertfragment.cpp.o CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/InsertFragment.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 65%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/mocs_compilation.cpp [ 65%] Built target InsertFragment make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 66%] Building CXX object avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/command.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/command.cpp.o -MF CMakeFiles/commands.dir/command.cpp.o.d -o CMakeFiles/commands.dir/command.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts/command.cpp [ 67%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/mocs_compilation.cpp [ 67%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PropertyTables.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/cmake -P CMakeFiles/PropertyTables.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/propertytables && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyTables.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PropertyTables.a CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyTables.dir/propertytables.cpp.o CMakeFiles/PropertyTables.dir/propertymodel.cpp.o CMakeFiles/PropertyTables.dir/propertyview.cpp.o CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PropertyTables.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 67%] Built target PropertyTables make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 67%] Generating ui_downloaderwidget.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/ui_downloaderwidget.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader/downloaderwidget.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 67%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/mocs_compilation.cpp [ 67%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges 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/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o -MF CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o.d -o CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp [ 67%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats/scriptfileformats.cpp [ 67%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/molecularproperties -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o -MF CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o.d -o CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp [ 67%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats/fileformatscript.cpp [ 67%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/scriptenergy.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/scriptenergy.cpp.o -MF CMakeFiles/Forcefield.dir/scriptenergy.cpp.o.d -o CMakeFiles/Forcefield.dir/scriptenergy.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield/scriptenergy.cpp [ 67%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o -MF CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o.d -o CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader/plugindownloader.cpp [ 67%] Building CXX object avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commandsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/commandscripts -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commands_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commandsPlugin.cpp.o -MF CMakeFiles/commands.dir/commandsPlugin.cpp.o.d -o CMakeFiles/commands.dir/commandsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts/commandsPlugin.cpp [ 67%] Linking CXX static library ../../../lib/avogadro2/staticplugins/MolecularProperties.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -P CMakeFiles/MolecularProperties.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolecularProperties.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/MolecularProperties.a CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/MolecularProperties.a [ 67%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o -MF CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o.d -o CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges/scriptcharges.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 67%] Built target MolecularProperties make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 67%] Linking CXX static library ../../../lib/avogadro2/staticplugins/commands.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts && /usr/bin/cmake -P CMakeFiles/commands.dir/cmake_clean_target.cmake [ 67%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o -MF CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/mocs_compilation.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/commandscripts && /usr/bin/cmake -E cmake_link_script CMakeFiles/commands.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/commands.a CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o CMakeFiles/commands.dir/command.cpp.o CMakeFiles/commands.dir/commandsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/commands.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 67%] Built target commands make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 67%] Building CXX object avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/mocs_compilation.cpp [ 67%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o -MF CMakeFiles/BallStick.dir/ballandstick.cpp.o.d -o CMakeFiles/BallStick.dir/ballandstick.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick/ballandstick.cpp [ 67%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptcharges -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o -MF CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o.d -o CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp [ 67%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/forcefield -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o -MF CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o.d -o CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp [ 67%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o -MF CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o.d -o CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader/downloaderwidget.cpp [ 68%] Building CXX object avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/closecontacts.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/closecontacts.cpp.o -MF CMakeFiles/CloseContacts.dir/closecontacts.cpp.o.d -o CMakeFiles/CloseContacts.dir/closecontacts.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts/closecontacts.cpp [ 68%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/scriptfileformats -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp [ 68%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ScriptCharges.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -P CMakeFiles/ScriptCharges.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScriptCharges.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ScriptCharges.a CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ScriptCharges.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 68%] Built target ScriptCharges make -f avogadro/qtplugins/force/CMakeFiles/Force.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/CMakeFiles/Force.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/force/CMakeFiles/Force.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 68%] Building CXX object avogadro/qtplugins/force/CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/force/CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/mocs_compilation.cpp [ 68%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Forcefield.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/cmake -P CMakeFiles/Forcefield.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/forcefield && /usr/bin/cmake -E cmake_link_script CMakeFiles/Forcefield.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Forcefield.a CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o CMakeFiles/Forcefield.dir/forcefield.cpp.o CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o CMakeFiles/Forcefield.dir/obmmenergy.cpp.o CMakeFiles/Forcefield.dir/scriptenergy.cpp.o CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Forcefield.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 68%] Built target Forcefield make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 68%] Building CXX object avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/mocs_compilation.cpp [ 68%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ScriptFileFormats.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -P CMakeFiles/ScriptFileFormats.dir/cmake_clean_target.cmake [ 69%] Building CXX object avogadro/qtplugins/force/CMakeFiles/Force.dir/force.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/force/CMakeFiles/Force.dir/force.cpp.o -MF CMakeFiles/Force.dir/force.cpp.o.d -o CMakeFiles/Force.dir/force.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force/force.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScriptFileFormats.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ScriptFileFormats.a CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ScriptFileFormats.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 69%] Built target ScriptFileFormats make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/depend [ 70%] Building CXX object avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/licorice.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/licorice.cpp.o -MF CMakeFiles/Licorice.dir/licorice.cpp.o.d -o CMakeFiles/Licorice.dir/licorice.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice/licorice.cpp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Building CXX object avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/mocs_compilation.cpp [ 70%] Building CXX object avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/meshes.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/meshes.cpp.o -MF CMakeFiles/Meshes.dir/meshes.cpp.o.d -o CMakeFiles/Meshes.dir/meshes.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes/meshes.cpp [ 70%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/ballandstick -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o -MF CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o.d -o CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp [ 70%] Building CXX object avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/closecontacts -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o -MF CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o.d -o CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp [ 70%] Building CXX object avogadro/qtplugins/force/CMakeFiles/Force.dir/ForcePlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/force -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/Force_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/force/CMakeFiles/Force.dir/ForcePlugin.cpp.o -MF CMakeFiles/Force.dir/ForcePlugin.cpp.o.d -o CMakeFiles/Force.dir/ForcePlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force/ForcePlugin.cpp [ 70%] Building CXX object avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/licorice -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/Licorice_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o -MF CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o.d -o CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice/LicoricePlugin.cpp [ 70%] Linking CXX static library ../../../lib/avogadro2/staticplugins/BallStick.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick && /usr/bin/cmake -P CMakeFiles/BallStick.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/ballandstick && /usr/bin/cmake -E cmake_link_script CMakeFiles/BallStick.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/BallStick.a CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o CMakeFiles/BallStick.dir/ballandstick.cpp.o CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/BallStick.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Built target BallStick make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o -MF CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/mocs_compilation.cpp [ 70%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Force.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force && /usr/bin/cmake -P CMakeFiles/Force.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/force && /usr/bin/cmake -E cmake_link_script CMakeFiles/Force.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Force.a CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o CMakeFiles/Force.dir/force.cpp.o CMakeFiles/Force.dir/ForcePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Force.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Built target Force make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Building CXX object avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o -MF CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/mocs_compilation.cpp [ 70%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Licorice.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice && /usr/bin/cmake -P CMakeFiles/Licorice.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/licorice && /usr/bin/cmake -E cmake_link_script CMakeFiles/Licorice.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Licorice.a CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o CMakeFiles/Licorice.dir/licorice.cpp.o CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Licorice.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Built target Licorice make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o -MF CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o.d -o CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader/zipextracter.cpp [ 70%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/mocs_compilation.cpp [ 70%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CloseContacts.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts && /usr/bin/cmake -P CMakeFiles/CloseContacts.dir/cmake_clean_target.cmake [ 70%] Building CXX object avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/meshes -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/Meshes_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o -MF CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o.d -o CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes/MeshesPlugin.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/closecontacts && /usr/bin/cmake -E cmake_link_script CMakeFiles/CloseContacts.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CloseContacts.a CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o CMakeFiles/CloseContacts.dir/closecontacts.cpp.o CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CloseContacts.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Built target CloseContacts make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Built target OverlayAxes_autogen_timestamp_deps make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Built target AlignTool_autogen_timestamp_deps make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 70%] Built target BondCentric_autogen_timestamp_deps make -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 71%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/noncovalent.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/noncovalent.cpp.o -MF CMakeFiles/NonCovalent.dir/noncovalent.cpp.o.d -o CMakeFiles/NonCovalent.dir/noncovalent.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent/noncovalent.cpp [ 72%] Automatic MOC for target Editor cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editor.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editortoolwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editor.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editortoolwidget.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/EditorPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/editor/editor.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor/editor.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/editor/editortoolwidget.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor/editortoolwidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/EditorPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/EditorPlugin.cpp [ 73%] Building CXX object avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o -MF CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o.d -o CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals/vanderwaals.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp.d" [ 74%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/plugindownloader -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o -MF CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o.d -o CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 74%] Built target Editor_autogen make -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 74%] Automatic MOC for target Focus cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/focus/focus.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/focus/focus.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/FocusPlugin.cpp" [ 75%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/wireframe.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/wireframe.cpp.o -MF CMakeFiles/Wireframe.dir/wireframe.cpp.o.d -o CMakeFiles/Wireframe.dir/wireframe.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe/wireframe.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/focus/focus.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus/focus.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/FocusPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/FocusPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 75%] Built target Focus_autogen make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 75%] Automatic MOC for target LabelEditor cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/label/labeleditor.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/label/labeleditor.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditorPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/label/labeleditor.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label/labeleditor.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditorPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditorPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 75%] Built target LabelEditor_autogen make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/DependInfo.cmake "--color=" [ 75%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PluginDownloader.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -P CMakeFiles/PluginDownloader.dir/cmake_clean_target.cmake make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 75%] Automatic MOC for target Manipulator cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -E cmake_link_script CMakeFiles/PluginDownloader.dir/link.txt --verbose=1 cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/AutogenInfo.json None /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PluginDownloader.a CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PluginDownloader.a AutoGen: Parsing "SRC:/avogadro/qtplugins/manipulator/manipulator.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/manipulator/manipulator.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/manipulator/manipulator.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator/manipulator.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp [ 75%] Built target PluginDownloader make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/DependInfo.cmake "--color=" [ 75%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Meshes.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes && /usr/bin/cmake -P CMakeFiles/Meshes.dir/cmake_clean_target.cmake make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 76%] Automatic MOC for target MeasureTool cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/AutogenInfo.json None cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/Meshes.dir/link.txt --verbose=1 AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Meshes.a CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o CMakeFiles/Meshes.dir/meshes.cpp.o CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o AutoGen: Parsing "SRC:/avogadro/qtplugins/measuretool/measuretool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/measuretool/measuretool.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/measuretool/measuretool.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool/measuretool.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Meshes.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 76%] Built target Meshes make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp.d" [ 77%] Automatic MOC for target Navigator cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/AutogenInfo.json None AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/timestamp AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc.d" AutoGen: Parsing "SRC:/avogadro/qtplugins/navigator/navigator.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/navigator/navigator.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/NavigatorPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/navigator/navigator.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator/navigator.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/NavigatorPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/NavigatorPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/deps" [ 77%] Built target Manipulator_autogen make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/DependInfo.cmake "--color=" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 77%] Automatic MOC for target PlayerTool cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/AutogenInfo.json None make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 77%] Built target MeasureTool_autogen make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/qtplugins/playertool/playertool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/playertool/playertool.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/playertool/playertool.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool/playertool.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 78%] Automatic MOC for target ResetView cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/resetview/resetview.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/resetview/resetview.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetViewPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/EWIEGA46WW/moc_resetview.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/resetview/resetview.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/EWIEGA46WW/moc_resetview.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview/resetview.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetViewPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetViewPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 78%] Built target Navigator_autogen make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/depend [ 78%] Built target PlayerTool_autogen make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/DependInfo.cmake "--color=" [ 78%] Building CXX object avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/vanderwaals -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o -MF CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o.d -o CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build [ 78%] Automatic MOC for target Surfaces cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenInfo.json None make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/i386-linux-gnu/qt5/QtConcurrent -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include [ 79%] Automatic MOC for target Selection cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenInfo.json None AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfacedialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfaces.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfacedialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfaces.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h" /usr/lib/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/i386-linux-gnu/qt5/QtConcurrent -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.h" /usr/lib/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/i386-linux-gnu/qt5/QtConcurrent -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/slatersetconcurrent.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/surfacedialog.h" /usr/lib/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/i386-linux-gnu/qt5/QtConcurrent -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/surfacedialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/surfaces.h" /usr/lib/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/i386-linux-gnu/qt5/QtConcurrent -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/surfaces.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/i386-linux-gnu/qt5/QtConcurrent -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontool.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/selectiontool/selectiontool.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool/selectiontool.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool/selectiontoolwidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/EWIEGA46WW/moc_resetview.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/timestamp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp.d" [ 79%] Built target ResetView_autogen make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 79%] Automatic MOC for target TemplateTool cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/AutogenInfo.json None [ 79%] Built target Surfaces_autogen AutoGen: Refreshing parse cache because it doesn't exist. make -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/depend AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetool.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp.d" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/templatetool/templatetool.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool/templatetool.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool/templatetoolwidget.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenUsed.txt" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/timestamp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 79%] Automatic MOC for target apbs cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenInfo.json None make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Refreshing parse cache because it doesn't exist. [ 79%] Built target Selection_autogen make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/depend AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbs.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/opendxreader.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbs.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/opendxreader.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbsPlugin.cpp" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbs.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/apbs.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbsdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/apbsdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/apbsoutputdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbsPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbsPlugin.cpp [ 79%] Automatic MOC for target Cp2kInput cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp.d" AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput/cp2kinput.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/AutogenUsed.txt" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/timestamp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 79%] Built target TemplateTool_autogen make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/depend [ 79%] Built target Cp2kInput_autogen make -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp.d" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/DependInfo.cmake "--color=" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/mocs_compilation.cpp" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/deps" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/DependInfo.cmake "--color=" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 79%] Built target apbs_autogen make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/depend [ 79%] Automatic MOC for target GamessInput cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenInfo.json None make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/DependInfo.cmake "--color=" [ 79%] Automatic MOC for target SVG cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 79%] Automatic MOC for target QuantumInput cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp" AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput/gamesshighlighter.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamessinput.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput/gamessinput.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput/gamessinputdialog.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/svg/svg.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/svg/svg.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVGPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/svg/svg.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg/svg.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVGPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVGPlugin.cpp AutoGen: Parsing "SRC:/avogadro/qtplugins/quantuminput/quantuminput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/quantuminput/quantuminput.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/quantuminput/quantuminput.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput/quantuminput.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/i386-linux-gnu/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/deps" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenUsed.txt" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/timestamp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 79%] Built target QuantumInput_autogen make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 79%] Automatic MOC for target OverlayAxes cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu [ 79%] Built target GamessInput_autogen make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/DependInfo.cmake "--color=" AutoGen: Parsing "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp" [ 79%] Linking CXX static library ../../../lib/avogadro2/staticplugins/VanDerWaals.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -P CMakeFiles/VanDerWaals.dir/cmake_clean_target.cmake AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes/overlayaxes.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E cmake_link_script CMakeFiles/VanDerWaals.dir/link.txt --verbose=1 [ 80%] Automatic MOC for target AlignTool cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/AutogenInfo.json None /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/VanDerWaals.a CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/VanDerWaals.a AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc.d" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' AutoGen: Parsing "SRC:/avogadro/qtplugins/aligntool/aligntool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/aligntool/aligntool.cpp" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/aligntool/aligntool.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool/aligntool.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/timestamp [ 80%] Built target VanDerWaals make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 80%] Built target SVG_autogen make -f avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 81%] Automatic MOC for target BondCentric [ 81%] Generating ui_editortoolwidget.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenInfo.json None cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/ui_editortoolwidget.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor/editortoolwidget.ui [ 81%] Generating qrc_editor.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/lib/qt5/bin/rcc --name editor --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/qrc_editor.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor/editor.qrc AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/CMakeFiles/Editor.dir/DependInfo.cmake "--color=" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/deps" AutoGen: Parsing "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.cpp" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/ParseCache.txt" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenUsed.txt" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool/bondcentrictool.h AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc", because it doesn't exist, from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 82%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/mocs_compilation.cpp [ 82%] Built target OverlayAxes_autogen make -f avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus.dir/depend AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/timestamp make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/CMakeFiles/Focus.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 82%] Built target AlignTool_autogen make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 82%] Generating qrc_label.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/lib/qt5/bin/rcc --name label --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/qrc_label.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label/label.qrc cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/DependInfo.cmake "--color=" [ 83%] Building CXX object avogadro/qtplugins/focus/CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/mocs_compilation.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 83%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/mocs_compilation.cpp AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc.d" AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 83%] Built target BondCentric_autogen make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 83%] Generating ui_manipulatewidget.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/ui_manipulatewidget.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator/manipulatewidget.ui [ 84%] Generating qrc_manipulator.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/lib/qt5/bin/rcc --name manipulator --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/qrc_manipulator.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator/manipulator.qrc cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 84%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/mocs_compilation.cpp [ 84%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/noncovalent -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o -MF CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o.d -o CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp [ 84%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/wireframe -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o -MF CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o.d -o CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe/WireframePlugin.cpp [ 84%] Building CXX object avogadro/qtplugins/focus/CMakeFiles/Focus.dir/focus.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/focus.cpp.o -MF CMakeFiles/Focus.dir/focus.cpp.o.d -o CMakeFiles/Focus.dir/focus.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus/focus.cpp [ 84%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Wireframe.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe && /usr/bin/cmake -P CMakeFiles/Wireframe.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/wireframe && /usr/bin/cmake -E cmake_link_script CMakeFiles/Wireframe.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Wireframe.a CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o CMakeFiles/Wireframe.dir/wireframe.cpp.o CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Wireframe.a [ 84%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editor.cpp.o -MF CMakeFiles/Editor.dir/editor.cpp.o.d -o CMakeFiles/Editor.dir/editor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor/editor.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 84%] Built target Wireframe make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 85%] Generating qrc_measuretool.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/lib/qt5/bin/rcc --name measuretool --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/qrc_measuretool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool/measuretool.qrc [ 85%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/labeleditor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io 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CMakeFiles/LabelEditor.dir/labeleditor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label/labeleditor.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/DependInfo.cmake "--color=" [ 85%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/manipulator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/manipulator.cpp.o -MF CMakeFiles/Manipulator.dir/manipulator.cpp.o.d -o CMakeFiles/Manipulator.dir/manipulator.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator/manipulator.cpp [ 85%] Linking CXX static library ../../../lib/avogadro2/staticplugins/NonCovalent.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent && /usr/bin/cmake -P CMakeFiles/NonCovalent.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E cmake_link_script CMakeFiles/NonCovalent.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/NonCovalent.a CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o CMakeFiles/NonCovalent.dir/noncovalent.cpp.o CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/NonCovalent.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 85%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/mocs_compilation.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 85%] Built target NonCovalent make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 86%] Generating qrc_navigator.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator && /usr/lib/qt5/bin/rcc --name navigator --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/qrc_navigator.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator/navigator.qrc cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 86%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/mocs_compilation.cpp [ 86%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/measuretool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/measuretool.cpp.o -MF CMakeFiles/MeasureTool.dir/measuretool.cpp.o.d -o CMakeFiles/MeasureTool.dir/measuretool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool/measuretool.cpp [ 86%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/navigator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/navigator.cpp.o -MF CMakeFiles/Navigator.dir/navigator.cpp.o.d -o CMakeFiles/Navigator.dir/navigator.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator/navigator.cpp [ 86%] Building CXX object avogadro/qtplugins/focus/CMakeFiles/Focus.dir/FocusPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/focus -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/Focus_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/FocusPlugin.cpp.o -MF CMakeFiles/Focus.dir/FocusPlugin.cpp.o.d -o CMakeFiles/Focus.dir/FocusPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus/FocusPlugin.cpp [ 86%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/qrc_label.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/qrc_label.cpp.o -MF CMakeFiles/LabelEditor.dir/qrc_label.cpp.o.d -o CMakeFiles/LabelEditor.dir/qrc_label.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/qrc_label.cpp [ 87%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/label -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o -MF CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o.d -o CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label/LabelEditorPlugin.cpp [ 87%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editortoolwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editortoolwidget.cpp.o -MF CMakeFiles/Editor.dir/editortoolwidget.cpp.o.d -o CMakeFiles/Editor.dir/editortoolwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor/editortoolwidget.cpp [ 87%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Focus.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus && /usr/bin/cmake -P CMakeFiles/Focus.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/focus && /usr/bin/cmake -E cmake_link_script CMakeFiles/Focus.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Focus.a CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o CMakeFiles/Focus.dir/focus.cpp.o CMakeFiles/Focus.dir/FocusPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Focus.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 87%] Built target Focus make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 87%] Generating qrc_playertool.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool && /usr/lib/qt5/bin/rcc --name playertool --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/qrc_playertool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool/playertool.qrc cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 87%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o [ 87%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/qrc_navigator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/mocs_compilation.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/navigator -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/Navigator_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core 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avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o -MF CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o.d -o CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator/NavigatorPlugin.cpp [ 87%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o -MF CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o.d -o CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/qrc_measuretool.cpp [ 87%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/measuretool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o -MF CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o.d -o CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp [ 87%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/qrc_editor.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/qrc_editor.cpp.o -MF CMakeFiles/Editor.dir/qrc_editor.cpp.o.d -o CMakeFiles/Editor.dir/qrc_editor.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/qrc_editor.cpp [ 87%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/EditorPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/editor -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/Editor_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/EditorPlugin.cpp.o -MF CMakeFiles/Editor.dir/EditorPlugin.cpp.o.d -o CMakeFiles/Editor.dir/EditorPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor/EditorPlugin.cpp [ 87%] Linking CXX static library ../../../lib/avogadro2/staticplugins/LabelEditor.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/label && /usr/bin/cmake -P CMakeFiles/LabelEditor.dir/cmake_clean_target.cmake [ 87%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC 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-I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/playertool.cpp.o -MF CMakeFiles/PlayerTool.dir/playertool.cpp.o.d -o CMakeFiles/PlayerTool.dir/playertool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool/playertool.cpp /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LabelEditor.a CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o CMakeFiles/LabelEditor.dir/labeleditor.cpp.o CMakeFiles/LabelEditor.dir/qrc_label.cpp.o CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o [ 87%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/manipulator -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o -MF CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o.d -o CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/LabelEditor.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 87%] Built target LabelEditor make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 87%] Building CXX object avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/mocs_compilation.cpp [ 87%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Navigator.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator && /usr/bin/cmake -P CMakeFiles/Navigator.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/navigator && /usr/bin/cmake -E cmake_link_script CMakeFiles/Navigator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Navigator.a CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o CMakeFiles/Navigator.dir/navigator.cpp.o CMakeFiles/Navigator.dir/qrc_navigator.cpp.o CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Navigator.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 87%] Built target Navigator make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 87%] Generating ui_selectiontoolwidget.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/ui_selectiontoolwidget.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool/selectiontoolwidget.ui /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool/selectiontoolwidget.ui: Warning: The name 'label' (QLabel) is already in use, defaulting to 'label1'. [ 87%] Generating qrc_selectiontool.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/lib/qt5/bin/rcc --name selectiontool --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/qrc_selectiontool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool/selectiontool.qrc cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 88%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/mocs_compilation.cpp [ 88%] Linking CXX static library ../../../lib/avogadro2/staticplugins/MeasureTool.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/bin/cmake -P CMakeFiles/MeasureTool.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/measuretool && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeasureTool.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/MeasureTool.a CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o CMakeFiles/MeasureTool.dir/measuretool.cpp.o CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/MeasureTool.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 88%] Built target MeasureTool make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 89%] Generating ui_surfacedialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/ui_surfacedialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/surfacedialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 89%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /usr/include/i386-linux-gnu/qt5/QtConcurrent -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp [ 89%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Editor.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/cmake -P CMakeFiles/Editor.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/editor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Editor.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Editor.a CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o CMakeFiles/Editor.dir/editor.cpp.o CMakeFiles/Editor.dir/editortoolwidget.cpp.o CMakeFiles/Editor.dir/qrc_editor.cpp.o CMakeFiles/Editor.dir/EditorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Editor.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 89%] Built target Editor make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 89%] Generating ui_templatetoolwidget.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/ui_templatetoolwidget.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool/templatetoolwidget.ui [ 89%] Building CXX object avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/resetview.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/resetview.cpp.o -MF CMakeFiles/ResetView.dir/resetview.cpp.o.d -o CMakeFiles/ResetView.dir/resetview.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview/resetview.cpp [ 89%] Generating qrc_template.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/lib/qt5/bin/rcc --name template --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/qrc_template.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool/template.qrc cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 89%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/mocs_compilation.cpp [ 89%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Manipulator.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/bin/cmake -P CMakeFiles/Manipulator.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/manipulator && /usr/bin/cmake -E cmake_link_script CMakeFiles/Manipulator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Manipulator.a CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o CMakeFiles/Manipulator.dir/manipulator.cpp.o CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Manipulator.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 89%] Built target Manipulator make -f avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 89%] Generating ui_apbsoutputdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/ui_apbsoutputdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/apbsoutputdialog.ui [ 89%] Generating ui_apbsdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/ui_apbsdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/apbsdialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 90%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o -MF CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/mocs_compilation.cpp [ 90%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontool.cpp.o -MF CMakeFiles/Selection.dir/selectiontool.cpp.o.d -o CMakeFiles/Selection.dir/selectiontool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool/selectiontool.cpp [ 90%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /usr/include/i386-linux-gnu/qt5/QtConcurrent -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o -MF CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o.d -o CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/gaussiansetconcurrent.cpp [ 90%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o -MF CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o.d -o CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/qrc_playertool.cpp [ 90%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/playertool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o -MF CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o.d -o CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp [ 91%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PlayerTool.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool && /usr/bin/cmake -P CMakeFiles/PlayerTool.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/playertool && /usr/bin/cmake -E cmake_link_script CMakeFiles/PlayerTool.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PlayerTool.a CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o CMakeFiles/PlayerTool.dir/playertool.cpp.o CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PlayerTool.a [ 91%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs.cpp.o -MF CMakeFiles/apbs.dir/apbs.cpp.o.d -o CMakeFiles/apbs.dir/apbs.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/apbs.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 91%] Built target PlayerTool make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 92%] Generating ui_cp2kinputdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/ui_cp2kinputdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput/cp2kinputdialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 92%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/mocs_compilation.cpp [ 92%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/templatetool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/templatetool.cpp.o -MF CMakeFiles/TemplateTool.dir/templatetool.cpp.o.d -o CMakeFiles/TemplateTool.dir/templatetool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool/templatetool.cpp [ 92%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /usr/include/i386-linux-gnu/qt5/QtConcurrent -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o -MF CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o.d -o CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/slatersetconcurrent.cpp [ 92%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o -MF CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o.d -o CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp [ 92%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o -MF CMakeFiles/apbs.dir/apbsdialog.cpp.o.d -o CMakeFiles/apbs.dir/apbsdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/apbsdialog.cpp [ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o -MF CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o.d -o CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp [ 92%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfacedialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /usr/include/i386-linux-gnu/qt5/QtConcurrent -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfacedialog.cpp.o -MF CMakeFiles/Surfaces.dir/surfacedialog.cpp.o.d -o CMakeFiles/Surfaces.dir/surfacedialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/surfacedialog.cpp [ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o -MF CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o.d -o CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/qrc_selectiontool.cpp [ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/selectiontool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o -MF CMakeFiles/Selection.dir/SelectionPlugin.cpp.o.d -o CMakeFiles/Selection.dir/SelectionPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp [ 92%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o -MF CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o.d -o CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/apbsoutputdialog.cpp [ 92%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o [ 92%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Selection.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /usr/include/i386-linux-gnu/qt5/QtConcurrent -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o -MF CMakeFiles/Surfaces.dir/surfaces.cpp.o.d -o CMakeFiles/Surfaces.dir/surfaces.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces/surfaces.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/cmake -P CMakeFiles/Selection.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Selection.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Selection.a CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o CMakeFiles/Selection.dir/selectiontool.cpp.o CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o CMakeFiles/Selection.dir/SelectionPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Selection.a [ 92%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o -MF CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o.d -o CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput/cp2kinput.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 92%] Built target Selection make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 93%] Generating ui_gamessinputdialog.h cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/lib/qt5/bin/uic -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/ui_gamessinputdialog.h /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput/gamessinputdialog.ui cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/DependInfo.cmake "--color=" [ 93%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o -MF CMakeFiles/apbs.dir/opendxreader.cpp.o.d -o CMakeFiles/apbs.dir/opendxreader.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs/opendxreader.cpp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 93%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/mocs_compilation.cpp [ 93%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o -MF CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o.d -o CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp [ 93%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/cp2kinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o -MF CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o.d -o CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp [ 93%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/apbs -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbs_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o -MF CMakeFiles/apbs.dir/apbsPlugin.cpp.o.d -o CMakeFiles/apbs.dir/apbsPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs/apbsPlugin.cpp [ 93%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Cp2kInput.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -P CMakeFiles/Cp2kInput.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cp2kInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Cp2kInput.a CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Cp2kInput.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 93%] Built target Cp2kInput make -f avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/CMakeFiles/SVG.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 93%] Building CXX object avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/mocs_compilation.cpp [ 94%] Linking CXX static library ../../../lib/avogadro2/staticplugins/apbs.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/cmake -P CMakeFiles/apbs.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/apbs && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/apbs.a CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o CMakeFiles/apbs.dir/apbs.cpp.o CMakeFiles/apbs.dir/apbsdialog.cpp.o CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o CMakeFiles/apbs.dir/opendxreader.cpp.o CMakeFiles/apbs.dir/apbsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/apbs.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 94%] Built target apbs make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 94%] Building CXX object avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/mocs_compilation.cpp [ 94%] Building CXX object avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/quantuminput.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/quantuminput.cpp.o -MF CMakeFiles/QuantumInput.dir/quantuminput.cpp.o.d -o CMakeFiles/QuantumInput.dir/quantuminput.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput/quantuminput.cpp [ 94%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/c++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/surfaces -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/quantumio -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -isystem /usr/include/i386-linux-gnu/qt5/QtConcurrent -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/gif-h -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty/tinycolormap/include -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o -MF CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o.d -o CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp [ 94%] Building CXX object avogadro/qtplugins/svg/CMakeFiles/SVG.dir/svg.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/svg/CMakeFiles/SVG.dir/svg.cpp.o -MF CMakeFiles/SVG.dir/svg.cpp.o.d -o CMakeFiles/SVG.dir/svg.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg/svg.cpp [ 94%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o -MF CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o.d -o CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput/gamesshighlighter.cpp [ 95%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Surfaces.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/cmake -P CMakeFiles/Surfaces.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/surfaces && /usr/bin/cmake -E cmake_link_script CMakeFiles/Surfaces.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Surfaces.a CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o CMakeFiles/Surfaces.dir/surfacedialog.cpp.o CMakeFiles/Surfaces.dir/surfaces.cpp.o CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Surfaces.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 95%] Built target Surfaces make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 95%] Building CXX object avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/mocs_compilation.cpp [ 95%] Building CXX object avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/resetview -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetView_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o -MF CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o.d -o CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview/ResetViewPlugin.cpp [ 95%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinput.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinput.cpp.o -MF CMakeFiles/GamessInput.dir/gamessinput.cpp.o.d -o CMakeFiles/GamessInput.dir/gamessinput.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput/gamessinput.cpp [ 95%] Building CXX object avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/quantuminput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o -MF CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o.d -o CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp [ 95%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ResetView.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview && /usr/bin/cmake -P CMakeFiles/ResetView.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/resetview && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResetView.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ResetView.a CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o CMakeFiles/ResetView.dir/resetview.cpp.o CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o [ 95%] Building CXX object avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o -MF CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o.d -o CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes/overlayaxes.cpp /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ResetView.a [ 96%] Linking CXX static library ../../../lib/avogadro2/staticplugins/QuantumInput.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput && /usr/bin/cmake -P CMakeFiles/QuantumInput.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/quantuminput && /usr/bin/cmake -E cmake_link_script CMakeFiles/QuantumInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/QuantumInput.a CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o CMakeFiles/QuantumInput.dir/quantuminput.cpp.o CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/QuantumInput.a [ 96%] Built target ResetView make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/depend make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 96%] Generating qrc_aligntool.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/lib/qt5/bin/rcc --name aligntool --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/qrc_aligntool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool/aligntool.qrc [ 96%] Built target QuantumInput make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/depend cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/DependInfo.cmake "--color=" make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 97%] Generating qrc_bondcentrictool.cpp [ 97%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool && /usr/lib/qt5/bin/rcc --name bondcentrictool --output /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/qrc_bondcentrictool.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool/bondcentrictool.qrc cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/mocs_compilation.cpp cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 97%] Building CXX object avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o -MF CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/mocs_compilation.cpp [ 98%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o -MF CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o.d -o CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool/templatetoolwidget.cpp [ 98%] Building CXX object avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVGPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/svg -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVG_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtSvg -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVGPlugin.cpp.o -MF CMakeFiles/SVG.dir/SVGPlugin.cpp.o.d -o CMakeFiles/SVG.dir/SVGPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg/SVGPlugin.cpp [ 98%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/gamessinput -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtNetwork -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o -MF CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o.d -o CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp [ 98%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/aligntool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/aligntool.cpp.o -MF CMakeFiles/AlignTool.dir/aligntool.cpp.o.d -o CMakeFiles/AlignTool.dir/aligntool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool/aligntool.cpp [ 99%] Linking CXX static library ../../../lib/avogadro2/staticplugins/GamessInput.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/cmake -P CMakeFiles/GamessInput.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/GamessInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/GamessInput.a CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o CMakeFiles/GamessInput.dir/gamessinput.cpp.o CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/GamessInput.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 99%] Built target GamessInput [ 99%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/aligntool 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/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o -MF CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o.d -o CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool/qrc_aligntool.cpp [ 99%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB 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/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool/bondcentrictool.cpp [ 99%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/qrc_template.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu 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avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/qrc_template.cpp.o -MF CMakeFiles/TemplateTool.dir/qrc_template.cpp.o.d -o CMakeFiles/TemplateTool.dir/qrc_template.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/qrc_template.cpp [ 99%] Linking CXX static library ../../../lib/avogadro2/staticplugins/SVG.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg && /usr/bin/cmake -P CMakeFiles/SVG.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/svg && /usr/bin/cmake -E cmake_link_script CMakeFiles/SVG.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/SVG.a CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o CMakeFiles/SVG.dir/svg.cpp.o CMakeFiles/SVG.dir/SVGPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/SVG.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [ 99%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/templatetool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateTool_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui 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CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o.d -o CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp [ 99%] Built target SVG [ 99%] Building CXX object avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro 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-fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o -MF CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o.d -o CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/qrc_bondcentrictool.cpp [ 99%] Building CXX object avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/bondcentrictool -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o -MF CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o.d -o CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp [100%] Building CXX object avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/overlayaxes -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/rendering -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtopengl -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o -MF CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o.d -o CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp [100%] Linking CXX static library ../../../lib/avogadro2/staticplugins/TemplateTool.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/cmake -P CMakeFiles/TemplateTool.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/templatetool && /usr/bin/cmake -E cmake_link_script CMakeFiles/TemplateTool.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/TemplateTool.a CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o CMakeFiles/TemplateTool.dir/templatetool.cpp.o CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o CMakeFiles/TemplateTool.dir/qrc_template.cpp.o CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/TemplateTool.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Built target TemplateTool [100%] Linking CXX static library ../../../lib/avogadro2/staticplugins/AlignTool.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/bin/cmake -P CMakeFiles/AlignTool.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/aligntool && /usr/bin/cmake -E cmake_link_script CMakeFiles/AlignTool.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/AlignTool.a CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o CMakeFiles/AlignTool.dir/aligntool.cpp.o CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/AlignTool.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Built target AlignTool [100%] Linking CXX static library ../../../lib/avogadro2/staticplugins/OverlayAxes.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -P CMakeFiles/OverlayAxes.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E cmake_link_script CMakeFiles/OverlayAxes.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/OverlayAxes.a CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/OverlayAxes.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Built target OverlayAxes [100%] Linking CXX static library ../../../lib/avogadro2/staticplugins/BondCentric.a cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -P CMakeFiles/BondCentric.dir/cmake_clean_target.cmake cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E cmake_link_script CMakeFiles/BondCentric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/BondCentric.a CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/BondCentric.a make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Built target BondCentric make -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen_timestamp_deps.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen_timestamp_deps.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen_timestamp_deps.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen_timestamp_deps.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[3]: Nothing to be done for 'avogadro/qtplugins/CMakeFiles/QtPlugins_autogen_timestamp_deps.dir/build'. make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Built target QtPlugins_autogen_timestamp_deps make -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Automatic MOC for target QtPlugins cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins && /usr/bin/cmake -E cmake_autogen /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/AutogenInfo.json None AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/c++ -std=c++17 -dM -E -c /usr/share/cmake-3.29/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/pluginfactory.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/pluginmanager.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/avogadroqtpluginsexport.h" AutoGen: Parsing "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/avogadrostaticqtplugins.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/pluginmanager.cpp" AutoMoc: Generating "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/EWIEGA46WW/moc_pluginmanager.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/pluginmanager.h" /usr/lib/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -I/usr/include/i386-linux-gnu/qt5 -I/usr/include/i386-linux-gnu/qt5/QtCore -I/usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -I/usr/include/eigen3 -I/usr/include/i386-linux-gnu/qt5/QtWidgets -I/usr/include/i386-linux-gnu/qt5/QtGui -I/build/reproducible-path/avogadrolibs-1.99.0/thirdparty -I/usr/include/c++/13 -I/usr/include/i386-linux-gnu/c++/13 -I/usr/include/c++/13/backward -I/usr/lib/gcc/i686-linux-gnu/13/include -I/usr/local/include -I/usr/include/i386-linux-gnu -I/usr/include --include /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/moc_predefs.h --output-dep-file -o /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/EWIEGA46WW/moc_pluginmanager.cpp /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/pluginmanager.h AutoMoc: Reading dependencies from "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/EWIEGA46WW/moc_pluginmanager.cpp.d" AutoMoc: Generating MOC compilation "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/mocs_compilation.cpp" AutoMoc: Merging MOC dependencies into "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/deps" AutoGen: Writing the parse cache file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/obj-i686-linux-gnu/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/AutogenUsed.txt" cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins && /usr/bin/cmake -E touch /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/timestamp make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Built target QtPlugins_autogen make -f avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins.dir/depend make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/avogadrolibs-1.99.0 /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/CMakeFiles/QtPlugins.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Building CXX object avogadro/qtplugins/CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o -MF CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o.d -o CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins/pluginmanager.cpp [100%] Building CXX object avogadro/qtplugins/CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins && /usr/bin/c++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/include -I/build/reproducible-path/avogadrolibs-1.99.0/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro -I/build/reproducible-path/avogadrolibs-1.99.0 -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtgui -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/io -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/core -I/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/calc -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /build/reproducible-path/avogadrolibs-1.99.0/thirdparty -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o -c /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins/QtPlugins_autogen/mocs_compilation.cpp [100%] Linking CXX shared library ../../lib/libAvogadroQtPlugins.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins && /usr/bin/cmake -E cmake_link_script CMakeFiles/QtPlugins.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -g -O2 -ffile-prefix-map=/build/reproducible-path/avogadrolibs-1.99.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Wno-deprecated-declarations -Wl,--fatal-warnings -Wl,--no-undefined -lc -fPIC -Wl,-z,relro -Wl,-z,now -Wl,-z,defs -Wl,--as-needed -shared -Wl,-soname,libAvogadroQtPlugins.so.1 -o ../../lib/libAvogadroQtPlugins.so.1.99.0 CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o ../../lib/avogadro2/staticplugins/ThreeDMol.a ../../lib/avogadro2/staticplugins/ApplyColors.a ../../lib/avogadro2/staticplugins/AlignTool.a ../../lib/avogadro2/staticplugins/BondCentric.a ../../lib/avogadro2/staticplugins/Bonding.a ../../lib/avogadro2/staticplugins/Cartoons.a ../../lib/avogadro2/staticplugins/Centroid.a ../../lib/avogadro2/staticplugins/ConfigurePython.a ../../lib/avogadro2/staticplugins/CopyPaste.a ../../lib/avogadro2/staticplugins/Crystal.a ../../lib/avogadro2/staticplugins/CrystalScene.a ../../lib/avogadro2/staticplugins/CustomElements.a ../../lib/avogadro2/staticplugins/Editor.a ../../lib/avogadro2/staticplugins/FetchPDB.a ../../lib/avogadro2/staticplugins/Focus.a ../../lib/avogadro2/staticplugins/Hydrogens.a ../../lib/avogadro2/staticplugins/ImportPQR.a ../../lib/avogadro2/staticplugins/NucleicInput.a ../../lib/avogadro2/staticplugins/Label.a ../../lib/avogadro2/staticplugins/LabelEditor.a ../../lib/avogadro2/staticplugins/LammpsInput.a ../../lib/avogadro2/staticplugins/LineFormatInput.a ../../lib/avogadro2/staticplugins/Manipulator.a ../../lib/avogadro2/staticplugins/MeasureTool.a ../../lib/avogadro2/staticplugins/Navigator.a ../../lib/avogadro2/staticplugins/NetworkDatabases.a ../../lib/avogadro2/staticplugins/OpenBabel.a ../../lib/avogadro2/staticplugins/OpenMMInput.a ../../lib/avogadro2/staticplugins/PlayerTool.a ../../lib/avogadro2/staticplugins/PLY.a ../../lib/avogadro2/staticplugins/POVRay.a ../../lib/avogadro2/staticplugins/PropertyTables.a ../../lib/avogadro2/staticplugins/ResetView.a ../../lib/avogadro2/staticplugins/Select.a ../../lib/avogadro2/staticplugins/Selection.a ../../lib/avogadro2/staticplugins/SpaceGroup.a ../../lib/avogadro2/staticplugins/Surfaces.a ../../lib/avogadro2/staticplugins/TemplateTool.a ../../lib/avogadro2/staticplugins/Vibrations.a ../../lib/avogadro2/staticplugins/VRML.a ../../lib/avogadro2/staticplugins/apbs.a ../../lib/avogadro2/staticplugins/CoordinateEditor.a ../../lib/avogadro2/staticplugins/Cp2kInput.a ../../lib/avogadro2/staticplugins/Forcefield.a ../../lib/avogadro2/staticplugins/GamessInput.a ../../lib/avogadro2/staticplugins/InsertFragment.a ../../lib/avogadro2/staticplugins/MolecularProperties.a ../../lib/avogadro2/staticplugins/SVG.a ../../lib/avogadro2/staticplugins/commands.a ../../lib/avogadro2/staticplugins/QuantumInput.a ../../lib/avogadro2/staticplugins/ScriptCharges.a ../../lib/avogadro2/staticplugins/ScriptFileFormats.a ../../lib/avogadro2/staticplugins/PluginDownloader.a ../../lib/avogadro2/staticplugins/BallStick.a ../../lib/avogadro2/staticplugins/CloseContacts.a ../../lib/avogadro2/staticplugins/Force.a ../../lib/avogadro2/staticplugins/Licorice.a ../../lib/avogadro2/staticplugins/Meshes.a ../../lib/avogadro2/staticplugins/NonCovalent.a ../../lib/avogadro2/staticplugins/VanDerWaals.a ../../lib/avogadro2/staticplugins/Wireframe.a ../../lib/avogadro2/staticplugins/OverlayAxes.a ../../lib/libAvogadroCalc.so.1.99.0 ../../thirdparty/libgwavi/libgwavi.a /usr/lib/i386-linux-gnu/libQt5Concurrent.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Svg.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 ../../lib/libAvogadroMoleQueue.so.1.99.0 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 ../../lib/libAvogadroQuantumIO.so.1.99.0 /usr/lib/i386-linux-gnu/libQt5Network.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libarchive.so ../../lib/libAvogadroQtOpenGL.so.1.99.0 ../../lib/libAvogadroQtGui.so.1.99.0 ../../lib/libAvogadroIO.so.1.99.0 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.15.10 /usr/lib/i386-linux-gnu/libQt5Core.so.5.15.10 ../../lib/libAvogadroRendering.so.1.99.0 ../../lib/libAvogadroCore.so.1.99.0 /usr/lib/i386-linux-gnu/libGLX.so /usr/lib/i386-linux-gnu/libOpenGL.so /usr/lib/i386-linux-gnu/libGLEW.so cd /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/avogadro/qtplugins && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtPlugins.so.1.99.0 ../../lib/libAvogadroQtPlugins.so.1 ../../lib/libAvogadroQtPlugins.so make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' [100%] Built target QtPlugins make[2]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' debian/rules execute_after_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0' cd obj-i686-linux-gnu; make documentation make[2]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/avogadrolibs-1.99.0 -B/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 documentation make[3]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/avogadrolibs-1.99.0 -B/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 docs/CMakeFiles/documentation.dir/all make[4]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make -f 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Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/icons Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/icons/fallback Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/icons/fallback/64x64 Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/icons/fallback/32x32 Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/icons/colormap Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtplugins Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/command Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc Searching for files in directory /build/reproducible-path/avogadrolibs-1.99.0/docs Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemanager.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemanager.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemodel.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemodel.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/defaultmodel.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/defaultmodel.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energycalculator.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energycalculator.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energymanager.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energymanager.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h... 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Parsing file /build/reproducible-path/build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:177: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:188: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.h:38: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.h:42: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.h:84: warning: unbalanced grouping commands /avogadrolibs-1.99.0/avogadro/core/atom.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper-inline.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper-inline.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomutilities.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomutilities.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/avogadrocore.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/avogadrocore.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/avospglib.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/avospglib.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/basisset.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/basisset.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/color3f.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/color3f.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elements.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elements.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussiansettools.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussiansettools.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/graph.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/graph.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layer.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layer.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/matrix.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/matrix.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/mdlvalence_p.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/mdlvalence_p.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/mesh.h... Parsing file /build/reproducible-path/avogadroli/build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h:90: warning: unbalanced grouping commands bs-1.99.0/avogadro/core/mesh.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/mutex.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/mutex.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/nameatomtyper.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/nameatomtyper.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuecolors.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuecolors.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ringperceiver.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ringperceiver.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/secondarystructure.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/secondarystructure.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/sharedmutex.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/sharedmutex.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slatersettools.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slatersettools.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroups.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroups.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/symbolatomtyper.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/symbolatomtyper.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/utilities.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/utilities.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variantmap.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variantmap.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/vector.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/vector.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cjsonformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cjsonformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cmlformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cmlformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cmsgpackformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cmsgpackformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/dcdformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/dcdformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformatmanager.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformatmanager.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/gromacsformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/gromacsformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/lammpsformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/lammpsformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/mdlformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/mdlformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/mmtfformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/mmtfformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/pdbformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/pdbformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/trrformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/trrformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/turbomoleformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/turbomoleformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/vaspformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/vaspformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/xyzformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/xyzformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/batchjob.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/batchjob.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jobobject.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jobobject.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jsonrpcclient.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jsonrpcclient.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgenerator.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgenerator.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratordialog.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratordialog.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratorwidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratorwidget.h... Preprocessing /build/reproduc/build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuewidget.h:128: warning: unbalanced grouping commands ible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuedialog.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuedialog.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuemanager.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuemanager.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuewidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuewidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/backgroundfileformat.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/backgroundfileformat.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/customelementdialog.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/customelementdialog.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementdetail_p.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementdetail_p.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementitem_p.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementitem_p.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementtranslator.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementtranslator.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/extensionplugin.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/extensionplugin.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/fileformatdialog.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/fileformatdialog.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/generichighlighter.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/generichighlighter.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/hydrogentools.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/hydrogentools.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacescript.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacescript.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacewidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacewidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictablescene_p.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictablescene_p.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictableview.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictableview.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/persistentatom.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/persistentatom.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/persistentbond.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/persistentbond.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pluginlayermanager.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pluginlayermanager.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scriptloader.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scriptloader.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sortfiltertreeproxymodel.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sortfiltertreeproxymodel.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/toolplugin.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/toolplugin.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/utilities.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/utilities.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/viewfactory.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/viewfactory.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/activeobjects.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/activeobjects.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/glwidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/glwidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/qttextrenderstrategy.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/qttextrenderstrategy.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessus.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessus.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gaussiancube.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gaussiancube.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gaussianfchk.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gaussianfchk.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/genericoutput.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/genericoutput.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/molden.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/molden.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/mopacaux.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/mopacaux.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/nwchemjson.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/nwchemjson.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/nwchemlog.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/nwchemlog.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/orca.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/orca.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/ambientocclusionspheregeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/ambientocclusionspheregeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arcsector.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arcsector.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arcstrip.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arcstrip.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arrowgeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arrowgeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/avogadrogl.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/avogadrogl.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/avogadrorendering.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/avogadrorendering.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/beziergeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/beziergeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bsplinegeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bsplinegeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bufferobject.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bufferobject.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/camera.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/camera.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometrynode.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometrynode.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/quad.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/quad.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/quadoutline.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/quadoutline.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/solidpipeline.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/solidpipeline.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h... Parsing file /bui/build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:77: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:84: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:91: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:103: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:110: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:117: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:124: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:131: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:138: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.h:116: warning: unbalanced grouping commands /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energycalculator.h:24: warning: Compound Avogadro::Calc::EnergyCalculator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:21: warning: Compound Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/angleiterator.h:23: warning: Compound Avogadro::Core::AngleIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:59: warning: Compound Avogadro::Core::ArraySet::Holder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:48: warning: Compound Avogadro::Core::ArraySet::PlaceHolder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:47: warning: Compound Avogadro::Core::AtomTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomutilities.h:20: warning: Compound Avogadro::Core::AtomUtilities is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:23: warning: Compound Avogadro::Core::BondTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h:23: warning: Compound Avogadro::Core::DihedralIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:88: warning: Compound Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:11: warning: Compound Avogadro::Core::ResidueData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ringperceiver.h:19: warning: Compound Avogadro::Core::RingPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/secondarystructure.h:36: warning: Compound Avogadro::Core::SecondaryStructureAssigner is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/secondarystructure.h:22: warning: Compound Avogadro::Core::hBondRecord is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:22: warning: Compound Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformatmanager.h:32: warning: Compound Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/lammpsformat.h:57: warning: Compound Avogadro::Io::LammpsDataFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/vaspformat.h:51: warning: Compound Avogadro::Io::OutcarFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementdetail_p.h:24: warning: Compound Avogadro::QtGui::ElementDetail is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/elementitem_p.h:24: warning: Compound Avogadro::QtGui::ElementItem is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:20: warning: Compound Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/hydrogentools.h:21: warning: Compound Avogadro::QtGui::HydrogenTools is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:19: warning: Compound Avogadro::QtGui::MoleculeSystem is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/periodictablescene_p.h:25: warning: Compound Avogadro::QtGui::PeriodicTableScene is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:671: warning: Compound Avogadro::QtGui::RWAtom is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:678: warning: Compound Avogadro::QtGui::RWBond is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h:27: warning: Compound Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h:37: warning: Compound Avogadro::QtGui::ScenePlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sortfiltertreeproxymodel.h:15: warning: Compound Avogadro::QtGui::SortFilterTreeProxyModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessus.h:18: warning: Compound Avogadro::QuantumIO::GAMESSUSOutput is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:77: warning: Compound Avogadro::QuantumIO::GamessukOut is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gaussiancube.h:17: warning: Compound Avogadro::QuantumIO::GaussianCube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gaussianfchk.h:20: warning: Compound Avogadro::QuantumIO::GaussianFchk is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/genericoutput.h:18: warning: Compound Avogadro::QuantumIO::GenericOutput is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/molden.h:18: warning: Compound Avogadro::QuantumIO::MoldenFile is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/mopacaux.h:19: warning: Compound Avogadro::QuantumIO::MopacAux is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/nwchemlog.h:19: warning: Compound Avogadro::QuantumIO::NWChemLog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/orca.h:20: warning: Compound Avogadro::QuantumIO::ORCAOutput is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bsplinegeometry.h:14: warning: Compound Avogadro::Rendering::BSplineGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/beziergeometry.h:14: warning: Compound Avogadro::Rendering::BezierGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:25: warning: Compound Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:64: warning: Compound Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:112: warning: Compound Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:16: warning: Compound Avogadro::Rendering::CylinderColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:25: warning: Compound Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/camera.h:26: warning: Compound Avogadro::Rendering::EigenData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:35: warning: Compound Avogadro::Rendering::GroupNode::NodeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:38: warning: Compound Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:25: warning: Compound Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:25: warning: Compound Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:28: warning: Compound Avogadro::Rendering::Point is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:42: warning: Compound Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:21: warning: Compound Avogadro::Rendering::ShaderInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/solidpipeline.h:12: warning: Compound Avogadro::Rendering::SolidPipeline is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:92: warning: Compound Avogadro::Rendering::Sphere is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h:17: warning: Compound Avogadro::Rendering::SphereColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:26: warning: Compound Avogadro::TypeTraits is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:37: warning: Compound Avogadro::TypeTraits< char > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:114: warning: Compound Avogadro::TypeTraits< double > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:103: warning: Compound Avogadro::TypeTraits< float > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:81: warning: Compound Avogadro::TypeTraits< int > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:59: warning: Compound Avogadro::TypeTraits< short > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:48: warning: Compound Avogadro::TypeTraits< unsigned char > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:92: warning: Compound Avogadro::TypeTraits< unsigned int > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:70: warning: Compound Avogadro::TypeTraits< unsigned short > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartdialog.h:14: warning: Compound Avogadro::VTK::ChartDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:26: warning: Compound Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/qvtkwidget.h:14: warning: Compound Avogadro::VTK::QVTKWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkglwidget.h:38: warning: Compound Avogadro::VTK::vtkGLWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:217: warning: no matching class member found for template < Molecule_T > BondTemplate< Molecule_T >::AtomType getOtherAtom(Avogadro::Core::BondTemplate< Molecule_T >::Molecule_T::AtomType atom) const Possible candidates: 'AtomType BondTemplate< Molecule_T >::getOtherAtom(Index index) const' at line 99 of file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h 'AtomType BondTemplate< Molecule_T >::getOtherAtom(AtomType atom) const' at line 104 of file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h ld/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabel2d.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabel2d.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabel3d.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabel3d.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textrenderstrategy.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textrenderstrategy.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/transformnode.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/transformnode.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/volumegeometry.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/volumegeometry.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartdialog.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartdialog.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/qvtkwidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/qvtkwidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkAvogadroActor.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkAvogadroActor.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkglwidget.h... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkglwidget.h... Preprocessing /build/reproducible-path/avogadrolibs-1.99.0/docs/mainpage.dox... Parsing file /build/reproducible-path/avogadrolibs-1.99.0/docs/mainpage.dox... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relat/build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkAvogadroActor.h:35: warning: Member override (variable) of class vtkAvogadroActor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkAvogadroActor.h:62: warning: Member m_scene (variable) of class vtkAvogadroActor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkAvogadroActor.h:63: warning: Member m_bounds[6] (variable) of class vtkAvogadroActor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkAvogadroActor.h:65: warning: Member m_initialized (variable) of class vtkAvogadroActor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/vector.h:32: warning: Member points[8] (variable) of struct Avogadro::Frustrum is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/vector.h:33: warning: Member planes[4] (variable) of struct Avogadro::Frustrum is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:33: warning: Member name() (function) of class Avogadro::TypeTraits is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:44: warning: Member name() (function) of class Avogadro::TypeTraits< char > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:121: warning: Member name() (function) of class Avogadro::TypeTraits< double > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:110: warning: Member name() (function) of class Avogadro::TypeTraits< float > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:88: warning: Member name() (function) of class Avogadro::TypeTraits< int > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:66: warning: Member name() (function) of class Avogadro::TypeTraits< short > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:55: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned char > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:99: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned int > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/types.h:77: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned short > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemanager.h:97: warning: Member nameForModel(const std::string &identifier) const (function) of class Avogadro::Calc::ChargeManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemodel.h:83: warning: Member partialCharges(Core::Molecule &mol) const =0 (function) of class Avogadro::Calc::ChargeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemodel.h:96: warning: argument 'array' of command @param is not found in the argument list of ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemodel.h:96: warning: The following parameter of Avogadro::Calc::ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const is not documented: parameter 'points' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/defaultmodel.h:35: warning: Member DefaultModel(const std::string &identifier="") (function) of class Avogadro::Calc::DefaultModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/defaultmodel.h:80: warning: Member m_identifier (variable) of class Avogadro::Calc::DefaultModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/defaultmodel.h:81: warning: Member m_elements (variable) of class Avogadro::Calc::DefaultModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energycalculator.h:118: warning: Member m_mask (variable) of class Avogadro::Calc::EnergyCalculator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:42: warning: Member value(const Eigen::VectorXd &x) override (function) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:43: warning: Member gradient(const Eigen::VectorXd &x, Eigen::VectorXd &grad) override (function) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:51: warning: Member m_molecule (variable) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:52: warning: Member m_cell (variable) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:53: warning: Member m_radii (variable) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:54: warning: Member m_vdw (variable) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:55: warning: Member m_depth (variable) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:56: warning: Member m_exponent (variable) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/lennardjones.h:58: warning: Member m_elements (variable) of class Avogadro::Calc::LennardJones is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/energycalculator.h:118: warning: Member m_mask (variable) of class Avogadro::Calc::EnergyCalculator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/angleiterator.h:21: warning: Member Angle (typedef) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h:21: warning: Member Dihedral (typedef) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:15: warning: Member AtomHybridization (enumeration) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:32: warning: Member AtomicNumber (enumeration) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:381: warning: Member operator==(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:388: warning: Member operator!=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:394: warning: Member operator<(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:401: warning: Member operator>(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:407: warning: Member operator<=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:413: warning: Member operator>=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:419: warning: Member swap(Array< T > &lhs, Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/avogadrocore.h:63: warning: Member isCustomElement(unsigned char atomicNumber) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:59: warning: Member ALAData("ALA", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HB3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:88: warning: Member CYSData("CYS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "SG", 16 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HG", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "SG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "SG", "HG" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:119: warning: Member ASPData("ASP", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OD1", 8 }, { "OD2", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD2", 1 }, { "HD2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "OD2" }, { "OD2", "HD2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "OD1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:153: warning: Member GLUData("GLU", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE1", 8 }, { "OE2", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "OE2" }, { "OE2", "HE2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CD", "OE1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:193: warning: Member PHEData("PHE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HZ", 1 }, { "HZ", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "HZ" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:223: warning: Member GLYData("GLY", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA2", 1 }, { "HA3", 1 }, { "HA3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "HA2" }, { "CA", "HA3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:246: warning: Member HISData("HIS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "ND1", 7 }, { "CD2", 6 }, { "CE1", 6 }, { "NE2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "ND1" }, { "ND1", "HD1" }, { "CD2", "NE2" }, { "CD2", "HD2" }, { "CE1", "NE2" }, { "CE1", "HE1" }, { "NE2", "HE2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD2" }, { "ND1", "CE1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:275: warning: Member ILEData("ILE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG1", 6 }, { "CG2", 6 }, { "CD1", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG12", 1 }, { "HG13", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HD11", 1 }, { "HD12", 1 }, { "HD13", 1 }, { "HD13", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "CG1", "CD1" }, { "CG1", "HG12" }, { "CG1", "HG13" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "CD1", "HD11" }, { "CD1", "HD12" }, { "CD1", "HD13" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:291: warning: Member LYSData("LYS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "CE", 6 }, { "NZ", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HZ1", 1 }, { "HZ2", 1 }, { "HZ3", 1 }, { "HZ3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "CE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "CE", "NZ" }, { "CE", "HE2" }, { "CE", "HE3" }, { "NZ", "HZ1" }, { "NZ", "HZ2" }, { "NZ", "HZ3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:308: warning: Member LEUData("LEU", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HD11", 1 }, { "HD12", 1 }, { "HD13", 1 }, { "HD21", 1 }, { "HD22", 1 }, { "HD23", 1 }, { "HD23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD1" }, { "CG", "CD2" }, { "CG", "HG" }, { "CD1", "HD11" }, { "CD1", "HD12" }, { "CD1", "HD13" }, { "CD2", "HD21" }, { "CD2", "HD22" }, { "CD2", "HD23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:324: warning: Member METData("MET", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "CE", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HE3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "SD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "SD", "CE" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:352: warning: Member ASNData("ASN", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OD1", 8 }, { "ND2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD21", 1 }, { "HD22", 1 }, { "HD22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "ND2" }, { "ND2", "HD21" }, { "ND2", "HD22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "OD1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:388: warning: Member PROData("PRO", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OXT", 8 }, { "H", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HD3", 1 } }, { { "N", "CA" }, { "N", "CD" }, { "N", "H" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "HD2" }, { "CD", "HD3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:426: warning: Member GLNData("GLN", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE1", 8 }, { "NE2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE21", 1 }, { "HE22", 1 }, { "HE22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "NE2" }, { "NE2", "HE21" }, { "NE2", "HE22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CD", "OE1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:453: warning: Member ARGData("ARG", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "NE", 7 }, { "CZ", 6 }, { "NH1", 7 }, { "NH2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE", 1 }, { "HH11", 1 }, { "HH12", 1 }, { "HH21", 1 }, { "HH22", 1 }, { "HH22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "NE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "NE", "CZ" }, { "NE", "HE" }, { "CZ", "NH1" }, { "NH1", "HH11" }, { "NH1", "HH12" }, { "NH2", "HH21" }, { "NH2", "HH22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CZ", "NH2" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:471: warning: Member SERData("SER", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OG", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HG", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "OG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OG", "HG" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:502: warning: Member THRData("THR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OG1", 8 }, { "CG2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG1", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HG23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "OG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "OG1", "HG1" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:539: warning: Member VALData("VAL", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG1", 6 }, { "CG2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG11", 1 }, { "HG12", 1 }, { "HG13", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HG23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "CG1", "HG11" }, { "CG1", "HG12" }, { "CG1", "HG13" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:580: warning: Member TRPData("TRP", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "NE1", 7 }, { "CE2", 6 }, { "CE3", 6 }, { "CZ2", 6 }, { "CZ3", 6 }, { "CH2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HE1", 1 }, { "HE3", 1 }, { "HZ2", 1 }, { "HZ3", 1 }, { "HH2", 1 }, { "HH2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "NE1" }, { "CD1", "HD1" }, { "CD2", "CE3" }, { "NE1", "CE2" }, { "NE1", "HE1" }, { "CE2", "CZ2" }, { "CE3", "HE3" }, { "CZ2", "HZ2" }, { "CZ3", "CH2" }, { "CZ3", "HZ3" }, { "CH2", "HH2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE3", "CZ3" }, { "CZ2", "CH2" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:602: warning: Member TYRData("TYR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OH", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HH", 1 }, { "HH", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "OH" }, { "OH", "HH" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:618: warning: Member DAData("DA", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H61", 1 }, { "H62", 1 }, { "H62", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "H61" }, { "N6", "H62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:645: warning: Member DCData("DC", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H41", 1 }, { "H42", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "C4", "N4" }, { "C4", "C5" }, { "N4", "H41" }, { "N4", "H42" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "N3", "C4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:666: warning: Member DGData("DG", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H21", 1 }, { "H21", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "N2" }, { "N2", "H21" }, { "N2", "H22" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:693: warning: Member DTData("DT", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "C7", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H3", 1 }, { "H71", 1 }, { "H72", 1 }, { "H73", 1 }, { "H73", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "H3" }, { "C4", "C5" }, { "C5", "C7" }, { "C7", "H71" }, { "C7", "H72" }, { "C7", "H73" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "C4", "O4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:716: warning: Member DIData("DI", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H1", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:741: warning: Member AData("A", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H61", 1 }, { "H62", 1 }, { "H62", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "H61" }, { "N6", "H62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:768: warning: Member CData("C", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H41", 1 }, { "H42", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "C4", "N4" }, { "C4", "C5" }, { "N4", "H41" }, { "N4", "H42" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "N3", "C4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:789: warning: Member GData("G", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H21", 1 }, { "H21", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "N2" }, { "N2", "H21" }, { "N2", "H22" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:816: warning: Member UData("U", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H3", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "H3" }, { "C4", "C5" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "C4", "O4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:837: warning: Member IData("I", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H1", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:864: warning: Member HEMData("HEM", { { "CHA", 6 }, { "CHB", 6 }, { "CHC", 6 }, { "CHD", 6 }, { "C1A", 6 }, { "C2A", 6 }, { "C3A", 6 }, { "C4A", 6 }, { "CMA", 6 }, { "CAA", 6 }, { "CBA", 6 }, { "CGA", 6 }, { "O1A", 8 }, { "O2A", 8 }, { "C1B", 6 }, { "C2B", 6 }, { "C3B", 6 }, { "C4B", 6 }, { "CMB", 6 }, { "CAB", 6 }, { "CBB", 6 }, { "C1C", 6 }, { "C2C", 6 }, { "C3C", 6 }, { "C4C", 6 }, { "CMC", 6 }, { "CAC", 6 }, { "CBC", 6 }, { "C1D", 6 }, { "C2D", 6 }, { "C3D", 6 }, { "C4D", 6 }, { "CMD", 6 }, { "CAD", 6 }, { "CBD", 6 }, { "CGD", 6 }, { "O1D", 8 }, { "O2D", 8 }, { "NA", 7 }, { "NB", 7 }, { "NC", 7 }, { "ND", 7 }, { "FE", 26 }, { "HHB", 1 }, { "HHC", 1 }, { "HHD", 1 }, { "HMA", 1 }, { "HMAA", 1 }, { "HMAB", 1 }, { "HAA", 1 }, { "HAAA", 1 }, { "HBA", 1 }, { "HBAA", 1 }, { "HMB", 1 }, { "HMBA", 1 }, { "HMBB", 1 }, { "HAB", 1 }, { "HBB", 1 }, { "HBBA", 1 }, { "HMC", 1 }, { "HMCA", 1 }, { "HMCB", 1 }, { "HAC", 1 }, { "HBC", 1 }, { "HBCA", 1 }, { "HMD", 1 }, { "HMDA", 1 }, { "HMDB", 1 }, { "HAD", 1 }, { "HADA", 1 }, { "HBD", 1 }, { "HBDA", 1 }, { "H2A", 1 }, { "H2D", 1 }, { "H2D", 1 } }, { { "CHA", "C1A" }, { "CHA", "HHA" }, { "CHB", "C4A" }, { "CHB", "HHB" }, { "CHC", "C4B" }, { "CHC", "HHC" }, { "CHD", "C1D" }, { "CHD", "HHD" }, { "C1A", "NA" }, { "C2A", "C3A" }, { "C2A", "CAA" }, { "C3A", "CMA" }, { "C4A", "NA" }, { "CMA", "HMA" }, { "CMA", "HMAA" }, { "CMA", "HMAB" }, { "CAA", "CBA" }, { "CAA", "HAA" }, { "CAA", "HAAA" }, { "CBA", "CGA" }, { "CBA", "HBA" }, { "CBA", "HBAA" }, { "CGA", "O2A" }, { "O2A", "H2A" }, { "C1B", "C2B" }, { "C1B", "NB" }, { "C2B", "CMB" }, { "C3B", "C4B" }, { "C3B", "CAB" }, { "CMB", "HMB" }, { "CMB", "HMBA" }, { "CMB", "HMBB" }, { "CAB", "HAB" }, { "CBB", "HBB" }, { "CBB", "HBBA" }, { "C1C", "C2C" }, { "C1C", "NC" }, { "C2C", "CMC" }, { "C3C", "C4C" }, { "C3C", "CAC" }, { "C4C", "NC" }, { "CMC", "HMC" }, { "CMC", "HMCA" }, { "CMC", "HMCB" }, { "CAC", "HAC" }, { "CBC", "HBC" }, { "CBC", "HBCA" }, { "C1D", "C2D" }, { "C2D", "CMD" }, { "C3D", "C4D" }, { "C3D", "CAD" }, { "C4D", "ND" }, { "CMD", "HMD" }, { "CMD", "HMDA" }, { "CMD", "HMDB" }, { "CAD", "CBD" }, { "CAD", "HAD" }, { "CAD", "HADA" }, { "CBD", "CGD" }, { "CBD", "HBD" }, { "CBD", "HBDA" }, { "CGD", "O2D" }, { "O2D", "H2D" }, { "FE", "NA" }, { "FE", "NB" }, { "FE", "NC" }, { "FE", "ND" } }, { { "CHA", "C4D" }, { "CHB", "C1B" }, { "CHC", "C1C" }, { "CHD", "C4C" }, { "C1A", "C2A" }, { "C3A", "C4A" }, { "CGA", "O1A" }, { "C2B", "C3B" }, { "C4B", "NB" }, { "CAB", "CBB" }, { "C2C", "C3C" }, { "CAC", "CBC" }, { "C1D", "ND" }, { "C2D", "C3D" }, { "CGD", "O1D" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:916: warning: Member HOHData("HOH", { { "O", 8 }, { "H1", 1 }, { "H1", 1 } }, { { "O", "H1" }, { "O", "H2" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:923: warning: Member SO4Data("SO4", { { "S", 16 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O3", 8 } }, { { "S", "O3" }, { "S", "O4" } }, { { "S", "O1" }, { "S", "O2" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:931: warning: Member GOLData("GOL", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "O3", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H2", 1 }, { "HO2", 1 }, { "H31", 1 }, { "H32", 1 }, { "H32", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "C3" }, { "C2", "H2" }, { "O2", "HO2" }, { "C3", "O3" }, { "C3", "H31" }, { "C3", "H32" }, { "O3", "HO3" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:963: warning: Member EDOData("EDO", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "HO2" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:987: warning: Member MSEData("MSE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "SE", 34 }, { "CE", 6 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HXT", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "OXT", "HXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "SE" }, { "CG", "HG2" }, { "CG", "HG3" }, { "SE", "CE" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1015: warning: Member NAGData("NAG", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "N2", 7 }, { "O1", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "O7", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H81", 1 }, { "H82", 1 }, { "H83", 1 }, { "HN2", 1 }, { "HO1", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "N2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "N2" }, { "C8", "H81" }, { "C8", "H82" }, { "C8", "H83" }, { "N2", "HN2" }, { "O1", "HO1" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, { { "C7", "O7" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1035: warning: Member PO4Data("PO4", { { "P", 15 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O3", 8 } }, { { "P", "O2" }, { "P", "O3" }, { "P", "O4" } }, { { "P", "O1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1043: warning: Member ACTData("ACT", { { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CH3", 6 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "OXT" }, { "C", "CH3" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1060: warning: Member PEGData("PEG", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H41", 1 }, { "H42", 1 }, { "H42", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O4" }, { "C4", "H41" }, { "C4", "H42" }, { "O4", "HO4" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1098: warning: Member BMAData("BMA", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1115: warning: Member MANData("MAN", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1132: warning: Member DMSData("DMS", { { "S", 16 }, { "O", 8 }, { "C1", 6 }, { "C2", 6 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "S", "C1" }, { "S", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "H21" }, { "C2", "H22" }, { "C2", "H23" } }, { { "S", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1155: warning: Member ADPData("ADP", { { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOB2", 1 }, { "HOB3", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3B", "HOB3" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1185: warning: Member FADData("FAD", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4X", 6 }, { "N5", 7 }, { "C5X", 6 }, { "C6", 6 }, { "C7", 6 }, { "C7M", 6 }, { "C8", 6 }, { "C8M", 6 }, { "C9", 6 }, { "C9A", 6 }, { "N10", 7 }, { "C10", 6 }, { "C1'", 6 }, { "C2'", 6 }, { "O2'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C4'", 6 }, { "O4'", 8 }, { "C5'", 6 }, { "O5'", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "HN3", 1 }, { "H6", 1 }, { "HM71", 1 }, { "HM72", 1 }, { "HM73", 1 }, { "HM81", 1 }, { "HM82", 1 }, { "HM83", 1 }, { "H9", 1 }, { "H1'1", 1 }, { "H1'2", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H4'", 1 }, { "HO4'", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H5'2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3P" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "N1", "C2" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4X" }, { "C4X", "C10" }, { "N5", "C5X" }, { "C5X", "C9A" }, { "C6", "C7" }, { "C6", "H6" }, { "C7", "C7M" }, { "C7M", "HM71" }, { "C7M", "HM72" }, { "C7M", "HM73" }, { "C8", "C8M" }, { "C8", "C9" }, { "C8M", "HM81" }, { "C8M", "HM82" }, { "C8M", "HM83" }, { "C9", "H9" }, { "C9A", "N10" }, { "N10", "C10" }, { "N10", "C1'" }, { "C1'", "C2'" }, { "C1'", "H1'1" }, { "C1'", "H1'2" }, { "C2'", "O2'" }, { "C2'", "C3'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C3'", "O3'" }, { "C3'", "C4'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C4'", "O4'" }, { "C4'", "C5'" }, { "C4'", "H4'" }, { "O4'", "HO4'" }, { "C5'", "O5'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "O5'", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "N1", "C10" }, { "C2", "O2" }, { "C4", "O4" }, { "C4X", "N5" }, { "C5X", "C6" }, { "C7", "C8" }, { "C9", "C9A" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1241: warning: Member ACEData("ACE", { { "C", 6 }, { "O", 8 }, { "CH3", 6 }, { "H", 1 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "CH3" }, { "C", "H" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1258: warning: Member MPDData("MPD", { { "C1", 6 }, { "C2", 6 }, { "O2", 8 }, { "CM", 6 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "HO2", 1 }, { "HM1", 1 }, { "HM2", 1 }, { "HM3", 1 }, { "H31", 1 }, { "H32", 1 }, { "H4", 1 }, { "HO4", 1 }, { "H51", 1 }, { "H52", 1 }, { "H52", 1 } }, { { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "O2" }, { "C2", "CM" }, { "C2", "C3" }, { "O2", "HO2" }, { "CM", "HM1" }, { "CM", "HM2" }, { "CM", "HM3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O4" }, { "C4", "C5" }, { "C4", "H4" }, { "O4", "HO4" }, { "C5", "H51" }, { "C5", "H52" }, { "C5", "H53" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1276: warning: Member GLCData("GLC", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1293: warning: Member ATPData("ATP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "O3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1326: warning: Member MESData("MES", { { "O1", 8 }, { "C2", 6 }, { "C3", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "S", 16 }, { "O1S", 8 }, { "O2S", 8 }, { "O3S", 8 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "HN4", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H81", 1 } }, { { "O1", "C2" }, { "O1", "C6" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "N4" }, { "C3", "H31" }, { "C3", "H32" }, { "N4", "C5" }, { "N4", "C7" }, { "N4", "HN4" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "S" }, { "C8", "H81" }, { "C8", "H82" }, { "S", "O3S" } }, { { "S", "O1S" }, { "S", "O2S" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1343: warning: Member TRSData("TRS", { { "C", 6 }, { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "N", 7 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "HN1", 1 }, { "HN2", 1 }, { "HN3", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO2", 1 } }, { { "C", "C1" }, { "C", "C2" }, { "C", "C3" }, { "C", "N" }, { "C1", "O1" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "O3" }, { "C3", "H31" }, { "C3", "H32" }, { "N", "HN1" }, { "N", "HN2" }, { "N", "HN3" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1372: warning: Member PG4Data("PG4", { { "O1", 8 }, { "C1", 6 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O3", 8 }, { "C5", 6 }, { "C6", 6 }, { "O4", 8 }, { "C7", 6 }, { "C8", 6 }, { "O5", 8 }, { "HO1", 1 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H41", 1 }, { "H42", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H82", 1 }, { "H82", 1 } }, { { "O1", "C1" }, { "O1", "HO1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O3" }, { "C4", "H41" }, { "C4", "H42" }, { "O3", "C5" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "O4" }, { "C6", "H61" }, { "C6", "H62" }, { "O4", "C7" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "O5" }, { "C8", "H81" }, { "C8", "H82" }, { "O5", "HO5" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1393: warning: Member PGEData("PGE", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "C6", 6 }, { "C5", 6 }, { "O3", 8 }, { "H1", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H2", 1 }, { "H22", 1 }, { "H3", 1 }, { "H32", 1 }, { "H4", 1 }, { "H42", 1 }, { "HO4", 1 }, { "H6", 1 }, { "H62", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H1" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H2" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H3" }, { "C3", "H32" }, { "C4", "O3" }, { "C4", "H4" }, { "C4", "H42" }, { "O4", "C6" }, { "O4", "HO4" }, { "C6", "C5" }, { "C6", "H6" }, { "C6", "H62" }, { "C5", "O3" }, { "C5", "H5" }, { "C5", "H52" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1410: warning: Member NADData("NAD", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H4N", 1 }, { "H5N", 1 }, { "H5N", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "H4N" }, { "C5N", "C6N" }, { "C5N", "H5N" }, { "C6N", "H6N" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "N1N", "C6N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C4N", "C5N" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1457: warning: Member FUCData("FUC", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H63", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO3", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "H61" }, { "C6", "H62" }, { "C6", "H63" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1474: warning: Member NH2Data("NH2", { { "N", 7 }, { "HN1", 1 }, { "HN1", 1 } }, { { "N", "HN1" }, { "N", "HN2" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1481: warning: Member FMTData("FMT", { { "C", 6 }, { "O1", 8 }, { "O2", 8 }, { "H", 1 }, { "H", 1 } }, { { "C", "O2" }, { "C", "H" }, { "O2", "HO2" } }, { { "C", "O1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1489: warning: Member NAPData("NAP", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "P2B", 15 }, { "O1X", 8 }, { "O2X", 8 }, { "O3X", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H4N", 1 }, { "H5N", 1 }, { "H6N", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "P2B" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "H4N" }, { "C5N", "C6N" }, { "C5N", "H5N" }, { "C6N", "H6N" }, { "P2B", "O2X" }, { "P2B", "O3X" }, { "O2X", "HOP2" }, { "O3X", "HOP3" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "N1N", "C6N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C4N", "C5N" }, { "P2B", "O1X" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1539: warning: Member SEPData("SEP", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "OG", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HXT", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "OG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OG", "P" }, { "C", "OXT" }, { "OXT", "HXT" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "C", "O" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1579: warning: Member GDPData("GDP", { { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOB2", 1 }, { "HOB3", 1 }, { "HOA2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3B", "HOB3" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1609: warning: Member GALData("GAL", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1626: warning: Member SF4Data("SF4", { { "FE1", 26 }, { "FE2", 26 }, { "FE3", 26 }, { "FE4", 26 }, { "S1", 16 }, { "S2", 16 }, { "S3", 16 }, { "S3", 16 } }, { { "FE1", "S2" }, { "FE1", "S3" }, { "FE1", "S4" }, { "FE2", "S1" }, { "FE2", "S3" }, { "FE2", "S4" }, { "FE3", "S1" }, { "FE3", "S2" }, { "FE3", "S4" }, { "FE4", "S1" }, { "FE4", "S2" }, { "FE4", "S3" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1651: warning: Member BGCData("BGC", { { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "C1", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H1", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C2", "C3" }, { "C2", "C1" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1668: warning: Member FMNData("FMN", { { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4A", 6 }, { "N5", 7 }, { "C5A", 6 }, { "C6", 6 }, { "C7", 6 }, { "C7M", 6 }, { "C8", 6 }, { "C8M", 6 }, { "C9", 6 }, { "C9A", 6 }, { "N10", 7 }, { "C10", 6 }, { "C1'", 6 }, { "C2'", 6 }, { "O2'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C4'", 6 }, { "O4'", 8 }, { "C5'", 6 }, { "O5'", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "HN3", 1 }, { "H6", 1 }, { "HM71", 1 }, { "HM72", 1 }, { "HM73", 1 }, { "HM81", 1 }, { "HM82", 1 }, { "HM83", 1 }, { "H9", 1 }, { "H1'1", 1 }, { "H1'2", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H4'", 1 }, { "HO4'", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N1", "C2" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4A" }, { "C4A", "C10" }, { "N5", "C5A" }, { "C5A", "C9A" }, { "C6", "C7" }, { "C6", "H6" }, { "C7", "C7M" }, { "C7M", "HM71" }, { "C7M", "HM72" }, { "C7M", "HM73" }, { "C8", "C8M" }, { "C8", "C9" }, { "C8M", "HM81" }, { "C8M", "HM82" }, { "C8M", "HM83" }, { "C9", "H9" }, { "C9A", "N10" }, { "N10", "C10" }, { "N10", "C1'" }, { "C1'", "C2'" }, { "C1'", "H1'1" }, { "C1'", "H1'2" }, { "C2'", "O2'" }, { "C2'", "C3'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C3'", "O3'" }, { "C3'", "C4'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C4'", "O4'" }, { "C4'", "C5'" }, { "C4'", "H4'" }, { "O4'", "HO4'" }, { "C5'", "O5'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "O5'", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "N1", "C10" }, { "C2", "O2" }, { "C4", "O4" }, { "C4A", "N5" }, { "C5A", "C6" }, { "C7", "C8" }, { "C9", "C9A" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1704: warning: Member UNKData("UNK", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HG3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "HG1" }, { "CG", "HG2" }, { "CG", "HG3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1739: warning: Member CITData("CIT", { { "C1", 6 }, { "O1", 8 }, { "O2", 8 }, { "C2", 6 }, { "C3", 6 }, { "O7", 8 }, { "C4", 6 }, { "C5", 6 }, { "O3", 8 }, { "O4", 8 }, { "C6", 6 }, { "O5", 8 }, { "O6", 8 }, { "HO2", 1 }, { "H21", 1 }, { "H22", 1 }, { "HO7", 1 }, { "H41", 1 }, { "H42", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "O2" }, { "C1", "C2" }, { "O2", "HO2" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "O7" }, { "C3", "C4" }, { "C3", "C6" }, { "O7", "HO7" }, { "C4", "C5" }, { "C4", "H41" }, { "C4", "H42" }, { "C5", "O4" }, { "O4", "HO4" }, { "C6", "O6" }, { "O6", "HO6" } }, { { "C1", "O1" }, { "C5", "O3" }, { "C6", "O5" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1767: warning: Member EPEData("EPE", { { "N1", 7 }, { "C2", 6 }, { "C3", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "O8", 8 }, { "C9", 6 }, { "C10", 6 }, { "S", 16 }, { "O1S", 8 }, { "O2S", 8 }, { "O3S", 8 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H82", 1 }, { "HO8", 1 }, { "H91", 1 }, { "H92", 1 }, { "H101", 1 }, { "H102", 1 }, { "H102", 1 } }, { { "N1", "C2" }, { "N1", "C6" }, { "N1", "C9" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "N4" }, { "C3", "H31" }, { "C3", "H32" }, { "N4", "C5" }, { "N4", "C7" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "O8" }, { "C8", "H81" }, { "C8", "H82" }, { "O8", "HO8" }, { "C9", "C10" }, { "C9", "H91" }, { "C9", "H92" }, { "C10", "S" }, { "C10", "H101" }, { "C10", "H102" }, { "S", "O3S" }, { "O3S", "HOS3" } }, { { "S", "O1S" }, { "S", "O2S" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1788: warning: Member TPOData("TPO", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG2", 6 }, { "OG1", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HOP2", 1 }, { "HOP3", 1 }, { "HOP3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG2" }, { "CB", "OG1" }, { "CB", "HB" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OG1", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "P", "O1P" }, { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1818: warning: Member PLPData("PLP", { { "N1", 7 }, { "C2", 6 }, { "C2A", 6 }, { "C3", 6 }, { "O3", 8 }, { "C4", 6 }, { "C4A", 6 }, { "O4A", 8 }, { "C5", 6 }, { "C6", 6 }, { "C5A", 6 }, { "O4P", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H2A1", 1 }, { "H2A2", 1 }, { "H2A3", 1 }, { "HO3", 1 }, { "H4A", 1 }, { "H6", 1 }, { "H5A1", 1 }, { "H5A2", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N1", "C6" }, { "C2", "C2A" }, { "C2", "C3" }, { "C2A", "H2A1" }, { "C2A", "H2A2" }, { "C2A", "H2A3" }, { "C3", "O3" }, { "O3", "HO3" }, { "C4", "C4A" }, { "C4", "C5" }, { "C4A", "H4A" }, { "C5", "C5A" }, { "C6", "H6" }, { "C5A", "O4P" }, { "C5A", "H5A1" }, { "C5A", "H5A2" }, { "O4P", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "N1", "C2" }, { "C3", "C4" }, { "C4A", "O4A" }, { "C5", "C6" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1840: warning: Member GTPData("GTP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "O3B", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "O3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "O3B", "PB" }, { "PB", "O2B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1873: warning: Member SAHData("SAH", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HN1", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HXT", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "N", "CA" }, { "N", "HN1" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "SD" }, { "CG", "HG1" }, { "CG", "HG2" }, { "SD", "C5'" }, { "C", "OXT" }, { "OXT", "HXT" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "C", "O" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1904: warning: Member BMEData("BME", { { "C1", 6 }, { "C2", 6 }, { "O1", 8 }, { "S2", 16 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "HO1", 1 }, { "HO1", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "S2" }, { "C2", "H21" }, { "C2", "H22" }, { "O1", "HO1" }, { "S2", "HS2" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1928: warning: Member ACYData("ACY", { { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CH3", 6 }, { "HXT", 1 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "OXT" }, { "C", "CH3" }, { "OXT", "HXT" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1947: warning: Member ANPData("ANP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "N3B", 7 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HNB1", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "N3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "PB", "O2B" }, { "PB", "N3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "N3B", "HNB1" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:1980: warning: Member IMDData("IMD", { { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "C5", 6 }, { "HN1", 1 }, { "H2", 1 }, { "HN3", 1 }, { "H4", 1 }, { "H4", 1 } }, { { "N1", "C2" }, { "N1", "C5" }, { "N1", "HN1" }, { "C2", "H2" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "H4" }, { "C5", "H5" } }, { { "C2", "N3" }, { "C4", "C5" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2003: warning: Member PCAData("PCA", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HG3", 1 } }, { { "N", "CA" }, { "N", "CD" }, { "N", "H" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "CD", "OE" }, { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2038: warning: Member CSOData("CSO", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "SG", 16 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "OD", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HXT", 1 }, { "HXT", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "SG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "SG", "OD" }, { "C", "OXT" }, { "OXT", "HXT" }, { "OD", "HD" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2071: warning: Member MLIData("MLI", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "O6", 8 }, { "O7", 8 }, { "O8", 8 }, { "O9", 8 }, { "H11", 1 }, { "H11", 1 } }, { { "C1", "C2" }, { "C1", "C3" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O7" }, { "C3", "O9" } }, { { "C2", "O6" }, { "C3", "O8" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2091: warning: Member FESData("FES", { { "FE1", 26 }, { "FE2", 26 }, { "S1", 16 }, { "S1", 16 } }, { { "FE1", "S1" }, { "FE1", "S2" }, { "FE2", "S1" }, { "FE2", "S2" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2100: warning: Member NDPData("NDP", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "P2B", 15 }, { "O1X", 8 }, { "O2X", 8 }, { "O3X", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H21N", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H41N", 1 }, { "H42N", 1 }, { "H5N", 1 }, { "H6N", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "P2B" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O2N", "H21N" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "N1N", "C6N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "C5N" }, { "C4N", "H41N" }, { "C4N", "H42N" }, { "C5N", "H5N" }, { "C6N", "H6N" }, { "P2B", "O2X" }, { "P2B", "O3X" }, { "O2X", "HOP2" }, { "O3X", "HOP3" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C5N", "C6N" }, { "P2B", "O1X" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2155: warning: Member AMPData("AMP", { { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP2", 1 }, { "HOP3", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "P", "O2P" }, { "P", "O3P" }, { "P", "O5'" }, { "O2P", "HOP2" }, { "O3P", "HOP3" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "O1P" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2182: warning: Member NO3Data("NO3", { { "N", 7 }, { "O1", 8 }, { "O2", 8 }, { "O2", 8 } }, { { "N", "O2" }, { "N", "O3" } }, { { "N", "O1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2189: warning: Member PTRData("PTR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OH", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HXT", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HO2P", 1 }, { "HO2P", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "OXT", "HXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "OH" }, { "OH", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HO2P" }, { "O3P", "HO3P" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2211: warning: Member IPAData("IPA", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "O2", 8 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "H2", 1 }, { "H31", 1 }, { "H32", 1 }, { "H33", 1 }, { "H33", 1 } }, { { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "H31" }, { "C3", "H32" }, { "C3", "H33" }, { "O2", "HO2" } }, {}) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2239: warning: Member COAData("COA", { { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N7A", 7 }, { "C8A", 6 }, { "N9A", 7 }, { "C1B", 6 }, { "C2B", 6 }, { "O2B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "P3B", 15 }, { "O7A", 8 }, { "O8A", 8 }, { "O9A", 8 }, { "C4B", 6 }, { "O4B", 8 }, { "C5B", 6 }, { "O5B", 8 }, { "P1A", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "P2A", 15 }, { "O4A", 8 }, { "O5A", 8 }, { "O6A", 8 }, { "CBP", 6 }, { "CCP", 6 }, { "CDP", 6 }, { "CEP", 6 }, { "CAP", 6 }, { "OAP", 8 }, { "C9P", 6 }, { "O9P", 8 }, { "N8P", 7 }, { "C7P", 6 }, { "C6P", 6 }, { "C5P", 6 }, { "O5P", 8 }, { "N4P", 7 }, { "C3P", 6 }, { "C2P", 6 }, { "S1P", 16 }, { "H2A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H8A", 1 }, { "H1B", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H3B", 1 }, { "HOA8", 1 }, { "HOA9", 1 }, { "H4B", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "HOA2", 1 }, { "HOA5", 1 }, { "H121", 1 }, { "H122", 1 }, { "H131", 1 }, { "H132", 1 }, { "H133", 1 }, { "H141", 1 }, { "H142", 1 }, { "H143", 1 }, { "H10", 1 }, { "HO1", 1 }, { "HN8", 1 }, { "H71", 1 }, { "H72", 1 }, { "H61", 1 }, { "H62", 1 }, { "HN4", 1 }, { "H31", 1 }, { "H32", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "C4A", "N9A" }, { "C5A", "C6A" }, { "C5A", "N7A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "C8A", "N9A" }, { "C8A", "H8A" }, { "N9A", "C1B" }, { "C1B", "C2B" }, { "C1B", "O4B" }, { "C1B", "H1B" }, { "C2B", "O2B" }, { "C2B", "C3B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C3B", "O3B" }, { "C3B", "C4B" }, { "C3B", "H3B" }, { "O3B", "P3B" }, { "P3B", "O8A" }, { "P3B", "O9A" }, { "O8A", "HOA8" }, { "O9A", "HOA9" }, { "C4B", "O4B" }, { "C4B", "C5B" }, { "C4B", "H4B" }, { "C5B", "O5B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "O5B", "P1A" }, { "P1A", "O2A" }, { "P1A", "O3A" }, { "O2A", "HOA2" }, { "O3A", "P2A" }, { "P2A", "O5A" }, { "P2A", "O6A" }, { "O5A", "HOA5" }, { "O6A", "CCP" }, { "CBP", "CCP" }, { "CBP", "CDP" }, { "CBP", "CEP" }, { "CBP", "CAP" }, { "CCP", "H121" }, { "CCP", "H122" }, { "CDP", "H131" }, { "CDP", "H132" }, { "CDP", "H133" }, { "CEP", "H141" }, { "CEP", "H142" }, { "CEP", "H143" }, { "CAP", "OAP" }, { "CAP", "C9P" }, { "CAP", "H10" }, { "OAP", "HO1" }, { "C9P", "N8P" }, { "N8P", "C7P" }, { "N8P", "HN8" }, { "C7P", "C6P" }, { "C7P", "H71" }, { "C7P", "H72" }, { "C6P", "C5P" }, { "C6P", "H61" }, { "C6P", "H62" }, { "C5P", "N4P" }, { "N4P", "C3P" }, { "N4P", "HN4" }, { "C3P", "C2P" }, { "C3P", "H31" }, { "C3P", "H32" }, { "C2P", "S1P" }, { "C2P", "H21" }, { "C2P", "H22" }, { "S1P", "HS1" } }, { { "N1A", "C6A" }, { "C2A", "N3A" }, { "C4A", "C5A" }, { "N7A", "C8A" }, { "P3B", "O7A" }, { "P1A", "O1A" }, { "P2A", "O4A" }, { "C9P", "O9P" }, { "C5P", "O5P" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2290: warning: Member KCXData("KCX", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "CE", 6 }, { "NZ", 7 }, { "C", 6 }, { "O", 8 }, { "CX", 6 }, { "OXT", 8 }, { "OQ1", 8 }, { "OQ2", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HZ", 1 }, { "HXT", 1 }, { "HXT", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "CE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "CE", "NZ" }, { "CE", "HE2" }, { "CE", "HE3" }, { "NZ", "CX" }, { "NZ", "HZ" }, { "C", "OXT" }, { "CX", "OQ2" }, { "OXT", "HXT" }, { "OQ2", "HQ2" } }, { { "C", "O" }, { "CX", "OQ1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2308: warning: Member H4BData("H4B", { { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4A", 6 }, { "C8A", 6 }, { "N5", 7 }, { "N8", 7 }, { "C6", 6 }, { "C7", 6 }, { "C9", 6 }, { "O9", 8 }, { "C10", 6 }, { "C11", 6 }, { "O10", 8 }, { "HN21", 1 }, { "HN22", 1 }, { "HN3", 1 }, { "HN5", 1 }, { "HN8", 1 }, { "H6", 1 }, { "H71", 1 }, { "H72", 1 }, { "H9", 1 }, { "HO9", 1 }, { "H10", 1 }, { "H111", 1 }, { "H112", 1 }, { "H113", 1 }, { "H113", 1 } }, { { "N1", "C8A" }, { "C2", "N2" }, { "C2", "N3" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4A" }, { "C4A", "N5" }, { "C8A", "N8" }, { "N5", "C6" }, { "N5", "HN5" }, { "N8", "C7" }, { "N8", "HN8" }, { "C6", "C7" }, { "C6", "C9" }, { "C6", "H6" }, { "C7", "H71" }, { "C7", "H72" }, { "C9", "O9" }, { "C9", "C10" }, { "C9", "H9" }, { "O9", "HO9" }, { "C10", "C11" }, { "C10", "O10" }, { "C10", "H10" }, { "C11", "H111" }, { "C11", "H112" }, { "C11", "H113" }, { "O10", "HO0" } }, { { "N1", "C2" }, { "C4", "O4" }, { "C4A", "C8A" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2329: warning: Member SAMData("SAM", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "CE", 6 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HN1", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "N", "CA" }, { "N", "HN1" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "SD" }, { "CG", "HG1" }, { "CG", "HG2" }, { "SD", "CE" }, { "SD", "C5'" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "C", "O" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2361: warning: Member GNPData("GNP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "N3B", 7 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HNB3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'2", 1 }, { "H5'1", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "N3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "N3B", "PB" }, { "N3B", "HNB3" }, { "PB", "O2B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'2" }, { "C5'", "H5'1" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2394: warning: Member FLCData("FLC", { { "CAC", 6 }, { "CA", 6 }, { "CB", 6 }, { "CBC", 6 }, { "CG", 6 }, { "CGC", 6 }, { "OA1", 8 }, { "OA2", 8 }, { "OB1", 8 }, { "OB2", 8 }, { "OG1", 8 }, { "OG2", 8 }, { "OHB", 8 }, { "HA1", 1 }, { "HA2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HG2", 1 } }, { { "CAC", "CA" }, { "CAC", "OA2" }, { "CA", "CB" }, { "CA", "HA1" }, { "CA", "HA2" }, { "CB", "CBC" }, { "CB", "CG" }, { "CB", "OHB" }, { "CBC", "OB2" }, { "CG", "CGC" }, { "CG", "HG1" }, { "CG", "HG2" }, { "CGC", "OG2" }, { "OHB", "HOB" } }, { { "CAC", "OA1" }, { "CBC", "OB1" }, { "CGC", "OG1" } }) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h:194: warning: Member swap(UnitCell &lhs, UnitCell &rhs) (function) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h:7: warning: Member element_symbols[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h:20: warning: Member element_names[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h:47: warning: Member element_masses[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h:71: warning: Member valence_electrons[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h:83: warning: Member element_VDW[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h:226: warning: Member element_covalent[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/elementdata.h:267: warning: Member element_color[][3] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuecolors.h:7: warning: Member chain_color[][3] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuecolors.h:25: warning: Member amino_color[][3] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuecolors.h:41: warning: Member shapely_color[][3] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuecolors.h:57: warning: Member secondary_color[][3] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:2431: warning: Member residueDict (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h:16: warning: Member space_group_international_number[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h:55: warning: Member space_group_schoenflies[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h:134: warning: Member space_group_hall_symbol[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h:666: warning: Member space_group_international[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h:1198: warning: Member space_group_international_full[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h:1730: warning: Member space_group_international_short[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h:1822: warning: Member space_group_setting[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/spacegroupdata.h:1884: warning: Member space_group_transforms[] (variable) of namespace Avogadro::Core is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/angleiterator.h:33: warning: Member operator*() (function) of class Avogadro::Core::AngleIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/angleiterator.h:37: warning: Member begin() (function) of class Avogadro::Core::AngleIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/angleiterator.h:39: warning: Member end() const (function) of class Avogadro::Core::AngleIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/angleiterator.h:43: warning: Member operator++() (function) of class Avogadro::Core::AngleIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/angleiterator.h:45: warning: Member operator!=(const AngleIterator &other) (function) of class Avogadro::Core::AngleIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:96: warning: Member Container (typedef) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:99: warning: Member ValueType (typedef) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:119: warning: Member Array(const size_t n, const ValueType &value=ValueType()) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:124: warning: Member Array(InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:156: warning: Member data() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:158: warning: Member constData() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:160: warning: Member size() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:162: warning: Member max_size() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:164: warning: Member empty() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:166: warning: Member capacity() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:168: warning: Member reserve(const size_t &sz) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:174: warning: Member resize(const size_t &sz, const ValueType &t=ValueType()) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:180: warning: Member clear() (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:186: warning: Member begin() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:188: warning: Member end() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:190: warning: Member begin() (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:196: warning: Member end() (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:202: warning: Member rbegin() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:204: warning: Member rend() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:206: warning: Member rbegin() (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:212: warning: Member rend() (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:218: warning: Member front() (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:224: warning: Member front() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:226: warning: Member back() (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:232: warning: Member back() const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:235: warning: Member assign(InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:241: warning: Member assign(size_type n, const value_type &val) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:247: warning: Member push_back(const ValueType &v) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:253: warning: Member pop_back() (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:259: warning: Member insert(iterator position, const value_type &val) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:265: warning: Member insert(iterator position, size_type n, const value_type &val) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:272: warning: Member insert(iterator position, InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:278: warning: Member erase(iterator position) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:284: warning: Member erase(iterator first, iterator last) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:290: warning: Member operator[](const std::size_t &idx) const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:295: warning: Member operator[](const std::size_t &idx) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:301: warning: Member at(const std::size_t &idx) const (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:304: warning: Member operator=(const std::vector< OtherT > &v) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:312: warning: Member operator=(const Array< OtherT > &v) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:319: warning: Member operator=(const Array &v) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:328: warning: Member swap(Array< ValueType > &other) (function) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:351: warning: Member d (variable) of class Avogadro::Core::Array is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:71: warning: Member m_content (variable) of class Avogadro::Core::ArraySet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:72: warning: Member m_data (variable) of class Avogadro::Core::ArraySet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:62: warning: Member Holder(const ValueType &value) (function) of class Avogadro::Core::ArraySet::Holder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:64: warning: Member type() const (function) of class Avogadro::Core::ArraySet::Holder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:66: warning: Member clone() const (function) of class Avogadro::Core::ArraySet::Holder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:68: warning: Member m_content (variable) of class Avogadro::Core::ArraySet::Holder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:53: warning: Member type() const =0 (function) of class Avogadro::Core::ArraySet::PlaceHolder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:55: warning: Member clone() const =0 (function) of class Avogadro::Core::ArraySet::PlaceHolder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:865: warning: Member Atom(Molecule *m, Index i) (function) of class Avogadro::Core::Atom is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:176: warning: Member selected() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:187: warning: Member label() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:117: warning: Member atomicNumber() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:128: warning: Member position2d() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:136: warning: Member position3d() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:144: warning: Member hybridization() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:152: warning: Member formalCharge() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:160: warning: Member color() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:168: warning: Member layer() const (function) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class AtomTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:44: warning: explicit link request to 'AtomType' could not be resolved /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class Avogadro::Core::AtomTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:176: warning: Member selected() const (function) of class Avogadro::Core::AtomTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class Avogadro::Core::AtomTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class Avogadro::Core::AtomTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:187: warning: Member label() const (function) of class Avogadro::Core::AtomTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class Avogadro::Core::AtomTyper is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::AtomTyper is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:872: warning: Member Bond(Molecule *m, Index i) (function) of class Avogadro::Core::Bond is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:93: warning: Member atom2() const (function) of class BondTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:111: warning: Member order() const (function) of class BondTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class BondTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class BondTemplate< Molecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:20: warning: explicit link request to 'BondType' could not be resolved /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class Avogadro::Core::BondTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class Avogadro::Core::BondTemplate is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/color3f.h:84: warning: Member m_data[3] (variable) of class Avogadro::Core::Color3f is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.h:40: warning: Member setMolecule(const Molecule *mol) (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.h:41: warning: Member molecule() const (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateblockgenerator.h:83: warning: Member specification() const (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:92: warning: Member resize(Index _size) (function) of class Avogadro::Core::CoordinateSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:93: warning: Member size() const (function) of class Avogadro::Core::CoordinateSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:94: warning: Member coordinates() (function) of class Avogadro::Core::CoordinateSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:95: warning: Member coordinates() const (function) of class Avogadro::Core::CoordinateSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:100: warning: Member operator[](Index _index) (function) of class Avogadro::Core::CoordinateSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:101: warning: Member operator[](Index _index) const (function) of class Avogadro::Core::CoordinateSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:71: warning: Member m_content (variable) of class Avogadro::Core::ArraySet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:72: warning: Member m_data (variable) of class Avogadro::Core::ArraySet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:98: warning: Found unknown command '\index' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:40: warning: Member Options (typedef) of class Avogadro::Core::CrystalTools is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:50: warning: The following parameter of Avogadro::Core::CrystalTools::rotateToStandardOrientation(Molecule &molecule, Options opts=None) is not documented: parameter 'molecule' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:65: warning: The following parameters of Avogadro::Core::CrystalTools::setVolume(Molecule &molecule, Real newVolume, Options opts=None) are not documented: parameter 'molecule' parameter 'newVolume' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:75: warning: The following parameter of Avogadro::Core::CrystalTools::niggliReduce(Molecule &molecule, Options opts=None) is not documented: parameter 'molecule' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:97: warning: The following parameter of Avogadro::Core::CrystalTools::buildSupercell(Molecule &molecule, unsigned int a, unsigned int b, unsigned int c) is not documented: parameter 'molecule' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:109: warning: The following parameters of Avogadro::Core::CrystalTools::setCellMatrix(Molecule &molecule, const Matrix3 &newCellColMatrix, Options opt=None) are not documented: parameter 'molecule' parameter 'newCellColMatrix' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:124: warning: Member data() const (function) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:227: warning: Member setName(const std::string &name_) (function) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:228: warning: Member name() const (function) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:230: warning: Member setCubeType(Type type) (function) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:231: warning: Member cubeType() const (function) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:239: warning: Member m_data (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:240: warning: Member m_min (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:240: warning: Member m_max (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:240: warning: Member m_spacing (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:241: warning: Member m_points (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:242: warning: Member m_minValue (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:242: warning: Member m_maxValue (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:243: warning: Member m_name (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:244: warning: Member m_cubeType (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:245: warning: Member m_lock (variable) of class Avogadro::Core::Cube is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:194: warning: The following parameter of Avogadro::Core::Cube::setValue(unsigned int i, float value) is not documented: parameter 'value' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h:33: warning: Member operator*() (function) of class Avogadro::Core::DihedralIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h:37: warning: Member begin() (function) of class Avogadro::Core::DihedralIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h:39: warning: Member end() const (function) of class Avogadro::Core::DihedralIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h:43: warning: Member operator++() (function) of class Avogadro::Core::DihedralIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/dihedraliterator.h:45: warning: Member operator!=(const DihedralIterator &other) (function) of class Avogadro::Core::DihedralIterator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:229: warning: Member symmetry() const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:230: warning: Member atomIndices() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:231: warning: Member atomIndices() const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:232: warning: Member moIndices() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:233: warning: Member moIndices() const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:234: warning: Member gtoIndices() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:235: warning: Member gtoIndices() const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:236: warning: Member cIndices() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:237: warning: Member cIndices() const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:238: warning: Member gtoA() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:239: warning: Member gtoA() const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:240: warning: Member gtoC() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:241: warning: Member gtoC() const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:242: warning: Member gtoCN() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:248: warning: Member moMatrix(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:256: warning: Member moMatrix(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:264: warning: Member moEnergy(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:272: warning: Member moEnergy(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:280: warning: Member moOccupancy(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:288: warning: Member moOccupancy(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:296: warning: Member moNumber(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:304: warning: Member moNumber(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:312: warning: Member densityMatrix() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussianset.h:313: warning: Member spinDensityMatrix() (function) of class Avogadro::Core::GaussianSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/gaussiansettools.h:35: warning: Member GaussianSetTools(Molecule *mol=nullptr) (function) of class Avogadro::Core::GaussianSetTools is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layer.h:31: warning: Member addAtom(size_t layer) (function) of class Avogadro::Core::Layer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layer.h:32: warning: Member addAtom(size_t layer, Index atom) (function) of class Avogadro::Core::Layer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layer.h:33: warning: Member addAtomToActiveLayer(Index atom) (function) of class Avogadro::Core::Layer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layer.h:34: warning: Member removeAtom(Index atom) (function) of class Avogadro::Core::Layer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layer.h:35: warning: Member removeLayer(size_t layer) (function) of class Avogadro::Core::Layer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:34: warning: Member LayerData(std::string save="") (function) of class Avogadro::Core::LayerData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:49: warning: Member boolToString(bool b) (function) of class Avogadro::Core::LayerData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:50: warning: Member stringToBool(std::string b) (function) of class Avogadro::Core::LayerData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:51: warning: Member m_save (variable) of class Avogadro::Core::LayerData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:229: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:230: warning: Member layer(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:303: warning: Member atomLabels() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:343: warning: Member addAtom(unsigned char atomicNumber, Vector3 position3d) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:438: warning: Member bondLabels() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:463: warning: Member mesh(Index index) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:464: warning: Member mesh(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:466: warning: Member meshCount() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:468: warning: Member clearMeshes() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:476: warning: Member cube(Index index) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:477: warning: Member cube(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:479: warning: Member cubeCount() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:481: warning: Member clearCubes() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:488: warning: Member cubes() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:543: warning: Member basisSet() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:564: warning: Member vibrationFrequencies() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:565: warning: Member setVibrationFrequencies(const Array< double > &freq) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:566: warning: Member vibrationIRIntensities() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:567: warning: Member setVibrationIRIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:568: warning: Member vibrationRamanIntensities() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:569: warning: Member setVibrationRamanIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:570: warning: Member vibrationLx(int mode) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:571: warning: Member setVibrationLx(const Array< Array< Vector3 > > &lx) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:592: warning: Member perceiveBondOrders() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:600: warning: Member coordinate3dCount() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:601: warning: Member setCoordinate3d(int coord) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:602: warning: Member coordinate3d(int index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:603: warning: Member setCoordinate3d(const Array< Vector3 > &coords, int index) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:614: warning: Member timeStep(int index, bool &status) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:645: warning: Member addResidue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:646: warning: Member addResidue(Residue &residue) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:647: warning: Member residue(Index index) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:649: warning: Member residues() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:650: warning: Member residues() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:775: warning: Member frozenAtomMask() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:782: warning: Member getAtomBonds(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:783: warning: Member getAtomOrders(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:787: warning: Member removeBonds(Index atom) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:789: warning: Member addBonds(const Array< std::pair< Index, Index > > &bonds, const Array< unsigned char > &orders) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:793: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:795: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:797: warning: Member getAtomsAtLayer(size_t layer) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:799: warning: Member layer() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:800: warning: Member layer() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:785: warning: Member makeBondPair(const Index &a, const Index &b) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:813: warning: Member m_data (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:818: warning: Member m_customElementMap (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:821: warning: Member m_positions2d (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:822: warning: Member m_positions3d (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:823: warning: Member m_atomLabels (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:824: warning: Member m_bondLabels (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:826: warning: Member m_timesteps (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:827: warning: Member m_hybridizations (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:828: warning: Member m_formalCharges (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:829: warning: Member m_forceVectors (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:830: warning: Member m_colors (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:832: warning: Member m_vibrationFrequencies (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:833: warning: Member m_vibrationIRIntensities (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:834: warning: Member m_vibrationRamanIntensities (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:835: warning: Member m_vibrationLx (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:838: warning: Member m_selectedAtoms (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:840: warning: Member m_meshes (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:841: warning: Member m_cubes (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:843: warning: Member m_basisSet (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:844: warning: Member m_unitCell (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:845: warning: Member m_residues (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:848: warning: Member m_hallNumber (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:850: warning: Member m_frozenAtomMask (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:70: warning: Member MoleculeInfo(const Molecule *m) (function) of class Avogadro::Core::MoleculeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:76: warning: Member clear() (function) of class Avogadro::Core::MoleculeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:62: warning: Member mol (variable) of class Avogadro::Core::MoleculeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:63: warning: Member visible (variable) of class Avogadro::Core::MoleculeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:64: warning: Member locked (variable) of class Avogadro::Core::MoleculeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:65: warning: Member enable (variable) of class Avogadro::Core::MoleculeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:66: warning: Member settings (variable) of class Avogadro::Core::MoleculeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:67: warning: Member layer (variable) of class Avogadro::Core::MoleculeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:68: warning: Member loaded (variable) of class Avogadro::Core::MoleculeInfo is not documented. ions... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Distributing member group documentation. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating file documentation... Generating page documentation... Generating group documentation... Generating class documentation... Generating docs for compound vtkAvogadroActor... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for compound Avogadro::Frustrum... Generating docs for compound Avogadro::TypeTraits... Generating docs for compound Avogadro::TypeTraits< char >... Generating docs for compound Avogadro::TypeTraits< double >... Generating docs for compound Avogadro::TypeTraits< float >... Generating docs for compound Avogadro::TypeTraits< int >... Generating docs for compound Avogadro::TypeTraits< short >... Generating docs for compound Avogadro::TypeTraits< unsigned char >... Generating docs for compound Avogadro::TypeTraits< unsigned int >... Generating docs for compound Avogadro::TypeTraits< unsigned short >... Generating docs for compound Avogadro::Calc::ChargeManager... Generating docs for compound Avogadro::Calc::ChargeModel... Generating docs for compound Avogadro::Calc::DefaultModel... Generating docs for compound Avogadro::Calc::EnergyCalculator... Generating docs for compound Avogadro::Calc::EnergyManager... Generating docs for compound Avogadro::Calc::LennardJones... Generating docs for namespace Avogadro::Core Generating docs for compound Avogadro::Core::AngleIterator... Generating docs for compound Avogadro::Core::Array... Generating docs for compound Avogadro::Core::ArraySet... Generating docs for nested compound Avogadro::Core::ArraySet::Holder... Generating docs for nested compound Avogadro::Core::ArraySet::PlaceHolder... Generating docs for compound Avogadro::Core::Atom... Generating docs for compound Avogadro::Core::AtomTemplate... Generating docs for compound Avogadro::Core::AtomTyper... Generating docs for compound Avogadro::Core::AtomUtilities... Generating docs for compound Avogadro::Core::AvoSpglib... Generating docs for compound Avogadro::Core::BasisSet... Generating docs for compound Avogadro::Core::Bond... Generating docs for compound Avogadro::Core::BondTemplate... Generating docs for compound Avogadro::Core::Color3f... Generating docs for compound Avogadro::Core::CoordinateBlockGenerator... Generating docs for compound Avogadro::Core::CoordinateSet... Generating docs for compound Avogadro::Core::CrystalTools... Generating docs for compound Avogadro::Core::Cube... Generating docs for compound Avogadro::Core::DihedralIterator... Generating docs for compound Avogadro::Core::Elements... Generating docs for compound Avogadro::Core::GaussianSet... Generating docs for compound Avogadro::Core::GaussianSetTools... Generating docs for compound Avogadro::Core::Graph... Generating docs for compound Avogadro::Core::hBondRecord... Generating docs for compound Avogadro::Core::Layer... Generating docs for compound Avogadro::Core::LayerData... Generating docs for compound Avogadro::Core::LayerManager... Generating docs for compound Avogadro::Core::Mesh... Generating docs for compound Avogadro::Core::Molecule... Generating docs for compound Avogadro::Core::MoleculeInfo... Generating docs for co/build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/nameatomtyper.h:26: warning: Member NameAtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::NameAtomTyper is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class AtomTyper< std::string > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class AtomTyper< std::string > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h:60: warning: Member m_maxDistance (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h:61: warning: Member m_binCount (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h:62: warning: Member m_bins (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h:63: warning: Member m_minPos (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h:64: warning: Member m_maxPos (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h:65: warning: Member m_cachedArray (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/neighborperceiver.h:66: warning: Member m_cachedIndex (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:39: warning: Member SecondaryStructure (enumeration) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:55: warning: Member Residue(std::string &name) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:56: warning: Member Residue(std::string &name, Index &number) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:57: warning: Member Residue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:59: warning: Member Residue(const Residue &other) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:61: warning: Member operator=(Residue other) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:65: warning: Member residueName() const (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:67: warning: Member setResidueName(std::string &name) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:69: warning: Member residueId() const (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:71: warning: Member setResidueId(Index &number) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:73: warning: Member chainId() const (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:75: warning: Member setChainId(const char &id) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:77: warning: Member secondaryStructure() const (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:82: warning: Member setSecondaryStructure(const SecondaryStructure &ss) (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:120: warning: Member hasAtomByIndex(Index index) const (function) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:138: warning: Member m_residueName (variable) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:139: warning: Member m_residueId (variable) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:140: warning: Member m_chainId (variable) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:141: warning: Member m_atomNameMap (variable) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:142: warning: Member m_heterogen (variable) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:143: warning: Member m_color (variable) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:144: warning: Member m_customColorSet (variable) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residue.h:145: warning: Member m_secondaryStructure (variable) of class Avogadro::Core::Residue is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:21: warning: Member ResidueData(std::string name, std::map< std::string, int > atomNames, std::vector< std::pair< std::string, std::string > > singleBonds, std::vector< std::pair< std::string, std::string > > doubleBonds) (function) of class Avogadro::Core::ResidueData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:31: warning: Member ResidueData(const ResidueData &other) (function) of class Avogadro::Core::ResidueData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:39: warning: Member operator=(ResidueData other) (function) of class Avogadro::Core::ResidueData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:46: warning: Member residueAtoms() (function) of class Avogadro::Core::ResidueData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:48: warning: Member residueSingleBonds() (function) of class Avogadro::Core::ResidueData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/residuedata.h:53: warning: Member residueDoubleBonds() (function) of class Avogadro::Core::ResidueData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ringperceiver.h:23: warning: Member RingPerceiver(const Molecule *m=nullptr) (function) of class Avogadro::Core::RingPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ringperceiver.h:27: warning: Member setMolecule(const Molecule *m) (function) of class Avogadro::Core::RingPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ringperceiver.h:28: warning: Member molecule() const (function) of class Avogadro::Core::RingPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ringperceiver.h:31: warning: Member rings() (function) of class Avogadro::Core::RingPerceiver is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/secondarystructure.h:40: warning: Member SecondaryStructureAssigner(Molecule *m=nullptr) (function) of class Avogadro::Core::SecondaryStructureAssigner is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/secondarystructure.h:43: warning: Member assign(Molecule *mol) (function) of class Avogadro::Core::SecondaryStructureAssigner is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h:137: warning: Member slaterTypes() (function) of class Avogadro::Core::SlaterSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h:138: warning: Member zetas() (function) of class Avogadro::Core::SlaterSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h:139: warning: Member factors() (function) of class Avogadro::Core::SlaterSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h:140: warning: Member PQNs() (function) of class Avogadro::Core::SlaterSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h:141: warning: Member normalizedMatrix() (function) of class Avogadro::Core::SlaterSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h:142: warning: Member densityMatrix() (function) of class Avogadro::Core::SlaterSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slaterset.h:144: warning: Member outputAll() (function) of class Avogadro::Core::SlaterSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/slatersettools.h:33: warning: Member SlaterSetTools(Molecule *mol=nullptr) (function) of class Avogadro::Core::SlaterSetTools is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/symbolatomtyper.h:26: warning: Member SymbolAtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::SymbolAtomTyper is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class AtomTyper< std::string > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class AtomTyper< std::string > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h:27: warning: Member UnitCell(Real a, Real b, Real c, Real alpha, Real beta, Real gamma) (function) of class Avogadro::Core::UnitCell is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h:28: warning: Member UnitCell(const Vector3 &a, const Vector3 &b, const Vector3 &c) (function) of class Avogadro::Core::UnitCell is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h:29: warning: Member UnitCell(const Matrix3 &cellMatrix) (function) of class Avogadro::Core::UnitCell is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h:30: warning: Member UnitCell(const UnitCell &other) (function) of class Avogadro::Core::UnitCell is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h:32: warning: Member operator=(UnitCell other) (function) of class Avogadro::Core::UnitCell is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/unitcell.h:89: warning: Member setFractionalMatrix(const Matrix3 &m) (function) of class Avogadro::Core::UnitCell is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant.h:31: warning: Member Type (enumeration) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant.h:127: warning: Member operator=(const Variant &variant) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:25: warning: Member Variant(const char *v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:31: warning: Member Variant(const MatrixXf &v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:74: warning: Member setValue(bool v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:85: warning: Member setValue(char v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:96: warning: Member setValue(short v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:107: warning: Member setValue(int v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:118: warning: Member setValue(long v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:129: warning: Member setValue(float v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:140: warning: Member setValue(double v) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:151: warning: Member setValue(std::string string) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:162: warning: Member setValue(const char *string) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:168: warning: Member setValue(void *pointer) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:179: warning: Member setValue(MatrixX matrix) (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:196: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:207: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:218: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:229: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:246: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:259: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:274: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:289: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:298: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:316: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variant-inline.h:325: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variantmap.h:29: warning: Member iterator (typedef) of class Avogadro::Core::VariantMap is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/variantmap.h:30: warning: Member const_iterator (typedef) of class Avogadro::Core::VariantMap is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:25: warning: Member ValueType (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:26: warning: Member Parent (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:29: warning: Member value_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:30: warning: Member allocator_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:31: warning: Member reference (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:32: warning: Member const_reference (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:33: warning: Member pointer (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:34: warning: Member const_pointer (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:35: warning: Member iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:36: warning: Member const_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:37: warning: Member reverse_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:38: warning: Member const_reverse_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:39: warning: Member difference_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:40: warning: Member size_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:44: warning: Member ArrayRefContainer(const size_t n, const ValueType &value=ValueType()) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:49: warning: Member ArrayRefContainer(const ArrayRefContainer &other) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:53: warning: Member ArrayRefContainer(InputIterator first, InputIterator last) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:58: warning: Member reref() (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:62: warning: Member deref() (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:69: warning: Member ref() const (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:72: warning: Member m_ref (variable) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/array.h:74: warning: Member data (variable) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformatmanager.h:39: warning: Member operator()(const std::string &s1, const std::string &s2) const noexcept (function) of struct Avogadro::Io::CaseInsensitiveComparator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformatmanager.h:34: warning: Member operator()(const unsigned char &c1, const unsigned char &c2) const (function) of struct Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cjsonformat.h:54: warning: Member deserialize(std::istream &in, Core::Molecule &molecule, bool json) (function) of class Avogadro::Io::CjsonFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cjsonformat.h:55: warning: Member serialize(std::ostream &out, const Core::Molecule &molecule, bool json) (function) of class Avogadro::Io::CjsonFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cjsonformat.h:54: warning: Member deserialize(std::istream &in, Core::Molecule &molecule, bool json) (function) of class Avogadro::Io::CjsonFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cjsonformat.h:55: warning: Member serialize(std::ostream &out, const Core::Molecule &molecule, bool json) (function) of class Avogadro::Io::CjsonFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/cmsgpackformat.h:56: warning: Member m_json (variable) of class Avogadro::Io::CMsgPackFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/pdbformat.h:56: warning: Member perceiveSubstitutedCations(Core::Molecule &molecule) (function) of class Avogadro::Io::PdbFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/batchjob.h:82: warning: Member BatchJob(const QString &scriptFilePath, QObject *parent=nullptr) (function) of class Avogadro::MoleQueue::BatchJob is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/batchjob.h:62: warning: Member InvalidBatchId (variable) of class Avogadro::MoleQueue::BatchJob is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/batchjob.h:68: warning: Member InvalidRequestId (variable) of class Avogadro::MoleQueue::BatchJob is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/batchjob.h:75: warning: Member InvalidServerId (variable) of class Avogadro::MoleQueue::BatchJob is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h:38: warning: Member Client(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::Client is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h:227: warning: Member MessageType (enumeration) of class Avogadro::MoleQueue::Client is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h:238: warning: Member m_jsonRpcClient (variable) of class Avogadro::MoleQueue::Client is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h:239: warning: Member m_requests (variable) of class Avogadro::MoleQueue::Client is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h:126: warning: Unsupported xml/html tag found /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgenerator.h:459: warning: Member InputGenerator(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgenerator.h:454: warning: The following parameter of Avogadro::MoleQueue::InputGenerator::InputGenerator(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratordialog.h:37: warning: Member InputGeneratorDialog(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGeneratorDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgeneratordialog.h:38: warning: Member InputGeneratorDialog(const QString &scriptFileName, QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGeneratorDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:128: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:129: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:130: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:131: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:133: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:134: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:135: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:136: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:137: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:138: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jobobject.h:148: warning: Member m_value (variable) of class Avogadro::MoleQueue::JobObject is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jsonrpcclient.h:48: warning: Member JsonRpcClient(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::JsonRpcClient is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jsonrpcclient.h:136: warning: Member m_packetCounter (variable) of class Avogadro::MoleQueue::JsonRpcClient is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/jsonrpcclient.h:137: warning: Member m_socket (variable) of class Avogadro::MoleQueue::JsonRpcClient is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuedialog.h:153: warning: Member done(int r) override (slot) of class Avogadro::MoleQueue::MoleQueueDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuedialog.h:34: warning: Member MoleQueueDialog(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuemanager.h:35: warning: Member MoleQueueManager(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h:85: warning: Member data(const QModelIndex &idx, int role) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h:86: warning: Member flags(const QModelIndex &idx=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h:87: warning: Member headerData(int section, Qt::Orientation orientation, int role) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h:89: warning: Member index(int row, int column, const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h:91: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h:92: warning: Member rowCount(const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuequeuelistmodel.h:93: warning: Member columnCount(const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuewidget.h:33: warning: Member MoleQueueWidget(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/molequeuewidget.h:127: warning: Member batchMode() const (function) of class Avogadro::MoleQueue::MoleQueueWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h:37: warning: Member ColorButton(QWidget *parent=0) (function) of class Avogadro::QtGui::ColorButton is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h:38: warning: Member ColorButton(const QColor &initial, QWidget *parent=0) (function) of class Avogadro::QtGui::ColorButton is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h:51: warning: argument 'custom' of command @param is not found in the argument list of ColorButton::setDialogTitle(const QString title="") /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h:51: warning: The following parameter of Avogadro::QtGui::ColorButton::setDialogTitle(const QString title="") is not documented: parameter 'title' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h:41: warning: Member splitVertical() (signal) of class Avogadro::QtGui::ContainerWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h:42: warning: Member splitHorizontal() (signal) of class Avogadro::QtGui::ContainerWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h:43: warning: Member closeView() (signal) of class Avogadro::QtGui::ContainerWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h:30: warning: Member ContainerWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::QtGui::ContainerWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h:34: warning: Member setViewWidget(QWidget *widget) (function) of class Avogadro::QtGui::ContainerWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h:35: warning: Member viewWidget() (function) of class Avogadro::QtGui::ContainerWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h:37: warning: Member setActive(bool active) (function) of class Avogadro::QtGui::ContainerWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/containerwidget.h:38: warning: Member isActive() const (function) of class Avogadro::QtGui::ContainerWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/customelementdialog.h:31: warning: Member CustomElementDialog(Molecule &mol, QWidget *parent=nullptr) (function) of class Avogadro::QtGui::CustomElementDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/extensionplugin.h:44: warning: Member ExtensionPlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ExtensionPlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:25: warning: Member Mode (enumeration) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:66: warning: Member setFileName(const QString &fname) (slot) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:63: warning: Member fileNameChanged(const QString &filename) (signal) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:31: warning: Member FileBrowseWidget(QWidget *theParent=nullptr) (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:34: warning: Member fileName() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:36: warning: Member validFileName() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:38: warning: Member browseButton() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:39: warning: Member lineEdit() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:41: warning: Member setMode(Mode m) (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/filebrowsewidget.h:42: warning: Member mode() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/generichighlighter.h:91: warning: Member highlightBlock(const QString &text) override (function) of class Avogadro::QtGui::GenericHighlighter is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/hydrogentools.h:77: warning: The following parameters of Avogadro::QtGui::HydrogenTools::generateNewHydrogenPositions(const RWAtom &atom, int numberOfHydrogens, std::vector< Vector3 > &positions) are not documented: parameter 'atom' parameter 'numberOfHydrogens' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h:35: warning: Member refresh() (slot) of class Avogadro::QtGui::InsertFragmentDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h:37: warning: Member filterTextChanged(const QString &) (slot) of class Avogadro::QtGui::InsertFragmentDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h:39: warning: Member activated() (slot) of class Avogadro::QtGui::InsertFragmentDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h:41: warning: Member currentChanged(const QModelIndex &selected, const QModelIndex &deselected) (slot) of class Avogadro::QtGui::InsertFragmentDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h:45: warning: Member performInsert(const QString &fileName, bool crystal) (signal) of class Avogadro::QtGui::InsertFragmentDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h:28: warning: Member InsertFragmentDialog(QWidget *parent=nullptr, QString directory="molecules") (function) of class Avogadro::QtGui::InsertFragmentDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/insertfragmentdialog.h:32: warning: Member fileName() (function) of class Avogadro::QtGui::InsertFragmentDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacescript.h:612: warning: Member finished() (signal) of class Avogadro::QtGui::InterfaceScript is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacescript.h:457: warning: Member InterfaceScript(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::InterfaceScript is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacescript.h:452: warning: The following parameter of Avogadro::QtGui::InterfaceScript::InterfaceScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:128: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:129: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:130: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:131: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:133: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:134: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:135: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:136: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:137: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:138: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. mpound Avogadro::Core::Mutex... Generating docs for compound Avogadro::Core::NameAtomTyper... Generating docs for compound Avogadro::Core::NeighborPerceiver... Generating docs for compound Avogadro::Core::Residue... Generating docs for compound Avogadro::Core::ResidueData... Generating docs for compound Avogadro::Core::RingPerceiver... Generating docs for compound Avogadro::Core::SecondaryStructureAssigner... Generating docs for compound Avogadro::Core::SharedMutex... Generating docs for compound Avogadro::Core::SlaterSet... Generating docs for compound Avogadro::Core::SlaterSetTools... Generating docs for compound Avogadro::Core::SpaceGroups... Generating docs for compound Avogadro::Core::SymbolAtomTyper... Generating docs for compound Avogadro::Core::UnitCell... Generating docs for compound Avogadro::Core::Variant... Generating docs for compound Avogadro::Core::VariantMap... Generating docs for compound Avogadro::Core::internal::ArrayRefContainer... Generating docs for compound Avogadro::Io::CaseInsensitiveComparator... Generating docs for nested compound Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare... Generating docs for compound Avogadro::Io::CjsonFormat... Generating docs for compound Avogadro::Io::CmlFormat... Generating docs for compound Avogadro::Io::CMsgPackFormat... Generating docs for compound Avogadro::Io::DcdFormat... Generating docs for compound Avogadro::Io::FileFormat... Generating docs for compound Avogadro::Io::FileFormatManager... Generating docs for compound Avogadro::Io::GromacsFormat... Generating docs for compound Avogadro::Io::Hdf5DataFormat... Generating docs for compound Avogadro::Io::LammpsDataFormat... Generating docs for compound Avogadro::Io::LammpsTrajectoryFormat... Generating docs for compound Avogadro::Io::MdlFormat... Generating docs for compound Avogadro::Io::MMTFFormat... Generating docs for compound Avogadro::Io::OutcarFormat... Generating docs for compound Avogadro::Io::PdbFormat... Generating docs for compound Avogadro::Io::PoscarFormat... Generating docs for compound Avogadro::Io::TrrFormat... Generating docs for compound Avogadro::Io::TurbomoleFormat... Generating docs for compound Avogadro::Io::XyzFormat... Generating docs for compound Avogadro::MoleQueue::BatchJob... Generating docs for compound Avogadro::MoleQueue::Client... Generating docs for compound Avogadro::MoleQueue::InputGenerator... Generating docs for compound Avogadro::MoleQueue::InputGeneratorDialog... Generating docs for compound Avogadro::MoleQueue::InputGeneratorWidget... Generating docs for compound Avogadro::MoleQueue::JobObject... Generating docs for compound Avogadro::MoleQueue::JsonRpcClient... Generating docs for compound Avogadro::MoleQueue::MoleQueueDialog... Generating docs for compound Avogadro::MoleQueue::MoleQueueManager... Generating docs for compound Avogadro::MoleQueue::MoleQueueQueueListModel... Generating docs for compound Avogadro::MoleQueue::MoleQueueWidget... Generating docs for compound Avogadro::QtGui::BackgroundFileFormat... Generating docs for compound Avogadro::QtGui::ColorButton... Generating docs for compound Avogadro::QtGui::ContainerWidget... Generating docs for compound Avogadro::QtGui::CustomElementDialog... Generating docs for compound Avogadro::QtGui::ElementDetail... Generating docs for compound Avogadro::QtGui::ElementItem... Generating docs for compound Avogadro::QtGui::ElementTranslator... Generating docs for compound Avogadro::QtGui::ExtensionPlugin... Generating docs for compound Avogadro::QtGui::ExtensionPluginFactory... Generating docs for compound Avogadro::QtGui::FileBrowseWidget... Generating docs for compound Avogadro::QtGui::FileFormatDialog... Generating docs for compound Avogadro::QtGui::GenericHighlighter... Generating docs for nested compound Avogadro::QtGui::GenericHighlighter::Rule... Generating docs for compound Avogadro::QtGui::HydrogenTools... Generating docs for compound Avogadro::QtGui::InsertFragmentDialog... Generating docs for compound Avogadro::QtGui::InterfaceScript... Generating docs for compound Avogadro::QtGui::InterfaceWidget... Gener/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:128: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:129: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:130: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:131: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:133: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:134: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:135: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:136: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:137: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/jsonwidget.h:138: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:31: warning: Member ColumnType (enumeration) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:68: warning: Member updateRows() (slot) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:40: warning: Member LayerModel(QObject *p=0) (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:42: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:43: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:44: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:46: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:48: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:50: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:52: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:55: warning: Member addItem() (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:56: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:57: warning: Member addMolecule(const Molecule *mol) (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:58: warning: Member setActiveLayer(int index, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:59: warning: Member removeItem(int row, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:61: warning: Member items() const (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:63: warning: Member flipVisible(size_t row) (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:64: warning: Member flipLocked(size_t row) (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/layermodel.h:65: warning: Member layerCount() const (function) of class Avogadro::QtGui::LayerModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.h:29: warning: Member removeLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.h:30: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.h:31: warning: Member setActiveLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:132: warning: Member duplicate(const Vector3i &c, const Vector3f &pos) (function) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:139: warning: Member m_iso (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:147: warning: Member m_normals (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:148: warning: Member m_indices (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:149: warning: Member m_progmin (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:150: warning: Member m_progmax (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:158: warning: Member a2iVertexOffset[8][3] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:159: warning: Member a2iEdgeConnection[12][2] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:160: warning: Member a2fEdgeDirection[12][3] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:161: warning: Member a2iTetrahedronEdgeConnection[6][2] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:162: warning: Member a2iTetrahedronsInACube[6][4] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:163: warning: Member aiTetrahedronEdgeFlags[16] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:164: warning: Member a2iTetrahedronTriangles[16][7] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:165: warning: Member aiCubeEdgeFlags[256] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:166: warning: Member a2iTriangleConnectionTable[256][16] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:52: warning: The following parameters of Avogadro::QtGui::MeshGenerator::MeshGenerator(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false, QObject *parent=nullptr) are not documented: parameter 'reverse' parameter 'parent' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:52: warning: found documented return type for Avogadro::QtGui::MeshGenerator::MeshGenerator that does not return anything /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:68: warning: The following parameter of Avogadro::QtGui::MeshGenerator::initialize(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false) is not documented: parameter 'reverse' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:125: warning: The following parameter of Avogadro::QtGui::MeshGenerator::offset(float val1, float val2) is not documented: parameter 'val2' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:48: warning: Member Molecule(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:97: warning: Member addAtom(unsigned char number, Vector3 position3d, Index uniqueId=MaxIndex) (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:135: warning: Member atomUniqueIds() (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:157: warning: Member addBonds(const Core::Array< std::pair< Index, Index > > &bonds, const Core::Array< unsigned char > &orders) (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:230: warning: Member bondUniqueIds() (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:232: warning: Member findAtomUniqueId(Index index) const (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:233: warning: Member findBondUniqueId(Index index) const (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:235: warning: Member undoMolecule() (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:237: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:238: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::QtGui::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:229: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:230: warning: Member layer(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:303: warning: Member atomLabels() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:343: warning: Member addAtom(unsigned char atomicNumber, Vector3 position3d) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:438: warning: Member bondLabels() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:463: warning: Member mesh(Index index) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:464: warning: Member mesh(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:466: warning: Member meshCount() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:468: warning: Member clearMeshes() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:476: warning: Member cube(Index index) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:477: warning: Member cube(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:479: warning: Member cubeCount() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:481: warning: Member clearCubes() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:488: warning: Member cubes() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:543: warning: Member basisSet() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:564: warning: Member vibrationFrequencies() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:565: warning: Member setVibrationFrequencies(const Array< double > &freq) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:566: warning: Member vibrationIRIntensities() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:567: warning: Member setVibrationIRIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:568: warning: Member vibrationRamanIntensities() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:569: warning: Member setVibrationRamanIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:570: warning: Member vibrationLx(int mode) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:571: warning: Member setVibrationLx(const Array< Array< Vector3 > > &lx) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:592: warning: Member perceiveBondOrders() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:600: warning: Member coordinate3dCount() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:601: warning: Member setCoordinate3d(int coord) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:602: warning: Member coordinate3d(int index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:603: warning: Member setCoordinate3d(const Array< Vector3 > &coords, int index) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:614: warning: Member timeStep(int index, bool &status) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:645: warning: Member addResidue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:646: warning: Member addResidue(Residue &residue) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:647: warning: Member residue(Index index) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:649: warning: Member residues() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:650: warning: Member residues() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:775: warning: Member frozenAtomMask() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:782: warning: Member getAtomBonds(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:783: warning: Member getAtomOrders(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:787: warning: Member removeBonds(Index atom) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:789: warning: Member addBonds(const Array< std::pair< Index, Index > > &bonds, const Array< unsigned char > &orders) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:793: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:795: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:797: warning: Member getAtomsAtLayer(size_t layer) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:799: warning: Member layer() (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:800: warning: Member layer() const (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:785: warning: Member makeBondPair(const Index &a, const Index &b) (function) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:813: warning: Member m_data (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:818: warning: Member m_customElementMap (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:821: warning: Member m_positions2d (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:822: warning: Member m_positions3d (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:823: warning: Member m_atomLabels (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:824: warning: Member m_bondLabels (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:826: warning: Member m_timesteps (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:827: warning: Member m_hybridizations (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:828: warning: Member m_formalCharges (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:829: warning: Member m_forceVectors (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:830: warning: Member m_colors (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:832: warning: Member m_vibrationFrequencies (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:833: warning: Member m_vibrationIRIntensities (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:834: warning: Member m_vibrationRamanIntensities (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:835: warning: Member m_vibrationLx (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:838: warning: Member m_selectedAtoms (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:840: warning: Member m_meshes (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:841: warning: Member m_cubes (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:843: warning: Member m_basisSet (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:844: warning: Member m_unitCell (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:845: warning: Member m_residues (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:848: warning: Member m_hallNumber (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/molecule.h:850: warning: Member m_frozenAtomMask (variable) of class Avogadro::Core::Molecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:173: warning: argument 'a' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:173: warning: argument 'b' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:173: warning: The following parameters of Avogadro::QtGui::Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) are not documented: parameter 'atomId1' parameter 'atomId2' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:66: warning: Member setActiveMolecule(QObject *active) (slot) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:67: warning: Member addItem(Avogadro::QtGui::Molecule *item) (slot) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:68: warning: Member removeItem(Avogadro::QtGui::Molecule *item) (slot) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:69: warning: Member itemChanged() (slot) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:63: warning: Member moleculeStateChanged(Avogadro::QtGui::Molecule *) (signal) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:40: warning: Member MoleculeModel(QObject *p=nullptr) (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:42: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:43: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:44: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:46: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:48: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:50: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:52: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:55: warning: Member clear() (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:57: warning: Member molecules() const (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:58: warning: Member activeMolecules() const (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:60: warning: Member activeMolecule() const (function) of class Avogadro::QtGui::MoleculeModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:23: warning: Member m_molecule (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:24: warning: Member m_modelView (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:25: warning: Member m_dirty (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/moleculemodel.h:26: warning: Member m_active (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:53: warning: Member splitHorizontal() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:54: warning: Member splitVertical() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:55: warning: Member createView() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:56: warning: Member removeView() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:50: warning: Member activeWidgetChanged(QWidget *widget) (signal) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:33: warning: Member MultiViewWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:37: warning: Member addWidget(QWidget *widget) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:44: warning: Member setActiveWidget(QWidget *widget) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:46: warning: Member setFactory(ViewFactory *factory) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/multiviewwidget.h:47: warning: Member setDefaultView(const QString &viewName) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/persistentatom.h:24: warning: Member MoleculeType (typedef) of class Avogadro::QtGui::PersistentAtom is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/persistentatom.h:25: warning: Member AtomType (typedef) of class Avogadro::QtGui::PersistentAtom is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/persistentbond.h:24: warning: Member MoleculeType (typedef) of class Avogadro::QtGui::PersistentBond is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/persistentbond.h:25: warning: Member BondType (typedef) of class Avogadro::QtGui::PersistentBond is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pluginlayermanager.h:26: warning: Member PluginLayerManager(const std::string &name="undef") (function) of class Avogadro::QtGui::PluginLayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pluginlayermanager.h:32: warning: Member atomLocked(size_t atom) const (function) of class Avogadro::QtGui::PluginLayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:139: warning: Member m_debug (variable) of class Avogadro::QtGui::PythonScript is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:140: warning: Member m_pythonInterpreter (variable) of class Avogadro::QtGui::PythonScript is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:141: warning: Member m_scriptFilePath (variable) of class Avogadro::QtGui::PythonScript is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:142: warning: Member m_errors (variable) of class Avogadro::QtGui::PythonScript is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:143: warning: Member m_process (variable) of class Avogadro::QtGui::PythonScript is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:31: warning: argument 'scriptFilePath_' of command @param is not found in the argument list of PythonScript::PythonScript(QObject *parent_=nullptr) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(QObject *parent_=nullptr) is not documented: parameter 'parent_' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:675: warning: Member RWAtom(RWMolecule *m, Index i) (function) of class Avogadro::QtGui::RWAtom is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:176: warning: Member selected() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:187: warning: Member label() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:117: warning: Member atomicNumber() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:128: warning: Member position2d() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:136: warning: Member position3d() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:144: warning: Member hybridization() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:152: warning: Member formalCharge() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:160: warning: Member color() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:168: warning: Member layer() const (function) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class AtomTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:682: warning: Member RWBond(RWMolecule *m, Index i) (function) of class Avogadro::QtGui::RWBond is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:93: warning: Member atom2() const (function) of class BondTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:111: warning: Member order() const (function) of class BondTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class BondTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class BondTemplate< RWMolecule > is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.h:29: warning: Member removeLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.h:30: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwlayermanager.h:31: warning: Member setActiveLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:75: warning: Member molecule() (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:76: warning: Member molecule() const (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:226: warning: Member atomLabel(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:227: warning: Member setAtomLabel(Index atomId, const std::string &label, const QString &undoText=tr("Change Atom Label")) (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:241: warning: Member setAtomPosition2d(Index, const Vector2 &) (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:242: warning: Member atomPosition2d(Index) (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:243: warning: Member atomPositions2d() const (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:298: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:299: warning: Member layer(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:656: warning: Member findAtomUniqueId(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:657: warning: Member findBondUniqueId(Index bondId) const (function) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:664: warning: Member m_interactive (variable) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:666: warning: Member m_undoStack (variable) of class Avogadro::QtGui::RWMolecule is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:628: warning: The following parameter of Avogadro::QtGui::RWMolecule::setForceVector(Index atomId, const Vector3 &pos, const QString &undoText=QStringLiteral("Change Force Vectors")) is not documented: parameter 'atomId' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h:30: warning: Member UndoCommand(RWMolecule &m) (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h:36: warning: Member positions3d() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h:37: warning: Member atomUniqueIds() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h:38: warning: Member bondUniqueIds() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h:40: warning: Member m_mol (variable) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule_undo.h:41: warning: Member m_molecule (variable) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h:103: warning: Member drawablesChanged() (signal) of class Avogadro::QtGui::ScenePlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h:42: warning: Member ScenePlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ScenePlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h:51: warning: Member processEditable(const RWMolecule &molecule, Rendering::GroupNode &node) (function) of class Avogadro::QtGui::ScenePlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h:100: warning: Member defaultBehavior() const (function) of class Avogadro::QtGui::ScenePlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sceneplugin.h:106: warning: Member m_layerManager (variable) of class Avogadro::QtGui::ScenePlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:55: warning: Member addItem(Avogadro::QtGui::ScenePlugin *item) (slot) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:56: warning: Member removeItem(Avogadro::QtGui::ScenePlugin *item) (slot) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:57: warning: Member itemChanged() (slot) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:51: warning: Member pluginStateChanged(Avogadro::QtGui::ScenePlugin *) (signal) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:52: warning: Member pluginConfigChanged() (signal) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:30: warning: Member ScenePluginModel(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:32: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:33: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:34: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:36: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:38: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:40: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:42: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:45: warning: Member clear() (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:47: warning: Member scenePlugins() const (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scenepluginmodel.h:48: warning: Member activeScenePlugins() const (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scriptloader.h:35: warning: Member ScriptLoader(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::ScriptLoader is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/scriptloader.h:44: warning: Member queryProgramName(const QString &scriptFilePath, QString &displayName) (function) of class Avogadro::QtGui::ScriptLoader is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sortfiltertreeproxymodel.h:20: warning: Member SortFilterTreeProxyModel(QObject *parent=nullptr) (function) of class Avogadro::QtGui::SortFilterTreeProxyModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sortfiltertreeproxymodel.h:25: warning: Member filterAcceptsRow(int sourceRow, const QModelIndex &sourceParent) const (function) of class Avogadro::QtGui::SortFilterTreeProxyModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/sortfiltertreeproxymodel.h:30: warning: Member setSourceRoot(const QModelIndex &sourceRoot) (function) of class Avogadro::QtGui::SortFilterTreeProxyModel is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/toolplugin.h:152: warning: Member setEditMolecule(QtGui::RWMolecule *) (slot) of class Avogadro::QtGui::ToolPlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/toolplugin.h:44: warning: Member ToolPlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ToolPlugin is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/toolplugin.h:181: warning: Member createInstance(QObject *parent=nullptr)=0 (function) of class Avogadro::QtGui::ToolPluginFactory is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/toolplugin.h:182: warning: Member identifier() const =0 (function) of class Avogadro::QtGui::ToolPluginFactory is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/glwidget.h:105: warning: Member rendererInvalid() (signal) of class Avogadro::QtOpenGL::GLWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/glwidget.h:49: warning: Member GLWidget(QWidget *parent=nullptr) (function) of class Avogadro::QtOpenGL::GLWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:80: warning: Member GamessukOut(const QString &filename, GaussianSet *basis) (function) of class Avogadro::QuantumIO::GamessukOut is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:82: warning: Member GamessukOutNoQt(const std::string &filename, GaussianSet *basis) (function) of class Avogadro::QuantumIO::GamessukOut is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:83: warning: Member outputParsedData() (function) of class Avogadro::QuantumIO::GamessukOut is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gaussianfchk.h:54: warning: Member outputAll() (function) of class Avogadro::QuantumIO::GaussianFchk is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:37: warning: Member outputCoord() (function) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:38: warning: Member outputBasis() (function) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:51: warning: Member atomLabels (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:52: warning: Member coordinates (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:54: warning: Member shellLabels (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:55: warning: Member shells (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:58: warning: Member gtoIndicies (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:62: warning: Member gtoExponents (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:63: warning: Member gtoCoefficients (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:66: warning: Member moEnergies (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:68: warning: Member moVectors (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:72: warning: Member nShell (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:73: warning: Member nBasisFunctions (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/gamessukout.h:74: warning: Member nElectrons (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/mopacaux.h:24: warning: Member outputAll() (function) of class Avogadro::QuantumIO::MopacAux is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/nwchemlog.h:24: warning: Member outputAll() (function) of class Avogadro::QuantumIO::NWChemLog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/ambientocclusionspheregeometry.h:37: warning: Member AmbientOcclusionSphereGeometry(const AmbientOcclusionSphereGeometry &other) (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/ambientocclusionspheregeometry.h:40: warning: Member operator=(AmbientOcclusionSphereGeometry) (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/ambientocclusionspheregeometry.h:81: warning: Member spheres() const (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:38: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:41: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:35: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arrowgeometry.h:28: warning: Member ArrowGeometry(const ArrowGeometry &other) (function) of class Avogadro::Rendering::ArrowGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arrowgeometry.h:31: warning: Member operator=(ArrowGeometry) (function) of class Avogadro::Rendering::ArrowGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arrowgeometry.h:50: warning: Member drawLine(const Vector3f &start, const Vector3f &end, double lineWidth) (function) of class Avogadro::Rendering::ArrowGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arrowgeometry.h:51: warning: Member drawCone(const Vector3f &base, const Vector3f &cap, double baseRadius, double) (function) of class Avogadro::Rendering::ArrowGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/arrowgeometry.h:25: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::ArrowGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/beziergeometry.h:20: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BezierGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bsplinegeometry.h:18: warning: Member BSplineGeometry(bool flat) (function) of class Avogadro::Rendering::BSplineGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bsplinegeometry.h:21: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BSplineGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bufferobject.h:31: warning: Member ObjectType (enumeration) of class Avogadro::Rendering::BufferObject is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bufferobject.h:37: warning: Member BufferObject(ObjectType type=ArrayBuffer) (function) of class Avogadro::Rendering::BufferObject is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/camera.h:44: warning: Member Camera(const Camera &o) (function) of class Avogadro::Rendering::Camera is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/camera.h:45: warning: Member operator=(const Camera &o) (function) of class Avogadro::Rendering::Camera is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:29: warning: Member Cartoon(float minRadius, float maxRadius) (function) of class Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:32: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, size_t group, size_t id, Core::Residue::SecondaryStructure sec) (function) of class Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bsplinegeometry.h:18: warning: Member BSplineGeometry(bool flat) (function) of class Avogadro::Rendering::BSplineGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:30: warning: Member ELIPSE_RATIO (variable) of class Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:37: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const override (function) of class Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:41: warning: Member computeScale(size_t index, float t, float scale) const override (function) of class Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/bsplinegeometry.h:21: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BSplineGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:43: warning: Member m_type (variable) of class Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:44: warning: Member m_minRadius (variable) of class Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cartoongeometry.h:44: warning: Member m_maxRadius (variable) of class Avogadro::Rendering::Cartoon is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:75: warning: Member ColorNormalVertex(const Vector3ub &c, const Vector3f &n, const Vector3f &v) (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:79: warning: Member colorOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:80: warning: Member normalOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:84: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:69: warning: Member color (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:70: warning: Member unusedAlign (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:71: warning: Member normal (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:72: warning: Member vertex (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:73: warning: Member padding[4] (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:48: warning: Member ColorTextureVertex(const Vector3f &p, const Vector3ub &c, const Vector2f &t, const Vector2f &t2=Vector2f::Zero()) (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:53: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:54: warning: Member colorOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:55: warning: Member textureCoordOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:60: warning: Member textureCoord2Offset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:42: warning: Member vertex (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:43: warning: Member color (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:44: warning: Member unusedAlign (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:45: warning: Member textureCoord (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:46: warning: Member textureCoord2 (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:94: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const =0 (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:123: warning: Member position() const (function) of class Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:124: warning: Member setPosition(const Vector3f &pos) (function) of class Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:126: warning: Member direction() const (function) of class Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:127: warning: Member setDirection(const Vector3f &dir) (function) of class Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:129: warning: Member length() const (function) of class Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:130: warning: Member setLength(float l) (function) of class Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:132: warning: Member radius() const (function) of class Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:133: warning: Member setRadius(float r) (function) of class Avogadro::Rendering::Cylinder is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:18: warning: Member CylinderColor(const Vector3f &pos1, const Vector3f &pos2, float r, const Vector3ub &c, const Vector3ub &c2=Vector3ub::Zero()) (function) of struct Avogadro::Rendering::CylinderColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:27: warning: Member end1 (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:28: warning: Member end2 (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:29: warning: Member radius (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:30: warning: Member color (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:31: warning: Member color2 (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:45: warning: Member CylinderGeometry(const CylinderGeometry &other) (function) of class Avogadro::Rendering::CylinderGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:48: warning: Member operator=(CylinderGeometry) (function) of class Avogadro::Rendering::CylinderGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/cylindergeometry.h:127: warning: Member cylinders() const (function) of class Avogadro::Rendering::CylinderGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:38: warning: Member DashedLineGeometry(const DashedLineGeometry &other) (function) of class Avogadro::Rendering::DashedLineGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:41: warning: Member operator=(DashedLineGeometry) (function) of class Avogadro::Rendering::DashedLineGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'color' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:30: warning: Member PackedVertex(const Vector3f &v, const Vector4ub &c) (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:33: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:34: warning: Member colorOffset() (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:27: warning: Member vertex (variable) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:28: warning: Member color (variable) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/camera.h:29: warning: Member projection (variable) of struct Avogadro::Rendering::EigenData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/camera.h:30: warning: Member modelView (variable) of struct Avogadro::Rendering::EigenData is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometrynode.h:70: warning: Member drawables() const (function) of class Avogadro::Rendering::GeometryNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometrynode.h:99: warning: Member m_drawables (variable) of class Avogadro::Rendering::GeometryNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:38: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:39: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:40: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:41: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:42: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:43: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:44: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:45: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:46: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:47: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/geometryvisitor.h:48: warning: Member visit(LineStripGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.h:89: warning: Member camera() (function) of class Avogadro::Rendering::GLRenderer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.h:93: warning: Member overlayCamera() (function) of class Avogadro::Rendering::GLRenderer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.h:97: warning: Member scene() (function) of class Avogadro::Rendering::GLRenderer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.h:101: warning: Member solidPipeline() (function) of class Avogadro::Rendering::GLRenderer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.h:112: warning: Member m_perspectiveFrustum (variable) of class Avogadro::Rendering::GLRenderer is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrenderer.h:113: warning: Member m_orthographicFrustum (variable) of class Avogadro::Rendering::GLRenderer is not documented. ating docs for compound Avogadro::QtGui::JsonWidget... Generating docs for compound Avogadro::QtGui::LayerModel... Generating docs for compound Avogadro::QtGui::MeshGenerator... Generating docs for compound Avogadro::QtGui::Molecule... Generating docs for compound Avogadro::QtGui::MoleculeModel... Generating docs for compound Avogadro::QtGui::MoleculeSystem... Generating docs for compound Avogadro::QtGui::MultiViewWidget... Generating docs for compound Avogadro::QtGui::PeriodicTableScene... Generating docs for compound Avogadro::QtGui::PeriodicTableView... Generating docs for compound Avogadro::QtGui::PersistentAtom... Generating docs for compound Avogadro::QtGui::PersistentBond... Generating docs for compound Avogadro::QtGui::PluginLayerManager... Generating docs for compound Avogadro::QtGui::PythonScript... Generating docs for compound Avogadro::QtGui::RWAtom... Generating docs for compound Avogadro::QtGui::RWBond... Generating docs for compound Avogadro::QtGui::RWLayerManager... Generating docs for compound Avogadro::QtGui::RWMolecule... Generating docs for nested compound Avogadro::QtGui::RWMolecule::UndoCommand... Generating docs for compound Avogadro::QtGui::ScenePlugin... Generating docs for compound Avogadro::QtGui::ScenePluginFactory... Generating docs for compound Avogadro::QtGui::ScenePluginModel... Generating docs for compound Avogadro::QtGui::ScriptLoader... Generating docs for compound Avogadro::QtGui::SortFilterTreeProxyModel... Generating docs for compound Avogadro::QtGui::ToolPlugin... Generating docs for compound Avogadro::QtGui::ToolPluginFactory... Generating docs for compound Avogadro::QtGui::ViewFactory... Generating docs for compound Avogadro::QtOpenGL::ActiveObjects... Generating docs for compound Avogadro::QtOpenGL::GLWidget... Generating docs for compound Avogadro::QtOpenGL::QtTextRenderStrategy... Generating docs for compound Avogadro::QuantumIO::GamessukOut... Generating docs for compound Avogadro::QuantumIO::GAMESSUSOutput... Generating docs for compound Avogadro::QuantumIO::GaussianCube... Generating docs for compound Avogadro::QuantumIO::GaussianFchk... Generating docs for compound Avogadro::QuantumIO::GenericOutput... Generating docs for compound Avogadro::QuantumIO::GUKBasisSet... Generating docs for compound Avogadro::QuantumIO::MoldenFile... Generating docs for compound Avogadro::QuantumIO::MopacAux... Generating docs for compound Avogadro::QuantumIO::NWChemJson... Generating docs for compound Avogadro::QuantumIO::NWChemLog... Generating docs for compound Avogadro::QuantumIO::ORCAOutput... Generating docs for compound Avogadro::Rendering::AmbientOcclusionSphereGeometry... Generating docs for compound Avogadro::Rendering::ArcSector... Generating docs for compound Avogadro::Rendering::ArcStrip... Generating docs for compound Avogadro::Rendering::ArrowGeometry... Generating docs for compound Avogadro::Rendering::BezierGeometry... Generating docs for compound Avogadro::Rendering::BSplineGeometry... Generating docs for compound Avogadro::Rendering::BufferObject... Generating docs for compound Avogadro::Rendering::Camera... Generating docs for compound Avogadro::Rendering::Cartoon... Generating docs for compound Avogadro::Rendering::ColorNormalVertex... Generating docs for compound Avogadro::Rendering::ColorTextureVertex... Generating docs for compound Avogadro::Rendering::CurveGeometry... Generating docs for compound Avogadro::Rendering::Cylinder... Generating docs for compound Avogadro::Rendering::CylinderColor... Generating docs for compound Avogadro::Rendering::CylinderGeometry... Generating docs for compound Avogadro::Rendering::DashedLineGeometry... Generating docs for nested compound Avogadro::Rendering::DashedLineGeometry::PackedVertex... Generating docs for compound Avogadro::Rendering::Drawable... Generating docs for compound Avogadro::Rendering::EigenData... Generating docs for compound Avogadro::Rendering::GeometryNode... Generating docs for compound Avogadro::Rendering::GeometryVisitor... Generating docs for compound Avogadro::Rendering::GLRenderer... Generating docs for compound/build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:30: warning: Member GLRenderVisitor(const Camera &camera=Camera(), const TextRenderStrategy *trs=nullptr) (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:47: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:48: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:49: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:50: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:52: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:53: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:54: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:55: warning: Member visit(TextLabel2D &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:56: warning: Member visit(TextLabel3D &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:57: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:59: warning: Member setCamera(const Camera &camera_) (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/glrendervisitor.h:60: warning: Member camera() const (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:28: warning: Member NodeType (enumeration) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:43: warning: Member GroupNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:96: warning: Member children() const (function) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:109: warning: Member clear(NodeType type) (function) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:110: warning: Member m_children (variable) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:54: warning: The following parameter of Avogadro::Rendering::GroupNode::addChild(Node *node, NodeType ui=NodeType::GEOMETRY) is not documented: parameter 'ui' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:38: warning: Member NodeInfo(Node *n, NodeType u) (function) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:39: warning: Member ui (variable) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:40: warning: Member node (variable) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:27: warning: Member operator==(const Identifier &other) const (function) of struct Avogadro::Rendering::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:33: warning: Member operator!=(const Identifier &other) const (function) of struct Avogadro::Rendering::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:35: warning: Member isValid() const (function) of struct Avogadro::Rendering::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:37: warning: Member molecule (variable) of struct Avogadro::Rendering::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:38: warning: Member type (variable) of struct Avogadro::Rendering::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:39: warning: Member index (variable) of struct Avogadro::Rendering::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:41: warning: Member Line(float r) (function) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:49: warning: Member add(Point *point) (function) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:54: warning: Member points (variable) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:55: warning: Member dirty (variable) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:56: warning: Member flat (variable) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:57: warning: Member radius (variable) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:58: warning: Member vbo (variable) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:59: warning: Member ibo (variable) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:60: warning: Member numberOfVertices (variable) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:61: warning: Member numberOfIndices (variable) of struct Avogadro::Rendering::Line is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:38: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:41: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:35: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:61: warning: argument 'color' of command @param is not found in the argument list of LineStripGeometry::addLineStrip(const Core::Array< Vector3f > &vertices, float lineWidth) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:30: warning: Member PackedVertex(const Vector3f &v, const Vector4ub &c) (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:31: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:32: warning: Member colorOffset() (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:27: warning: Member vertex (variable) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:28: warning: Member color (variable) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:67: warning: argument 'colors' of command @param is not found in the argument list of MeshGeometry::addVertices(const Core::Array< Vector3f > &vertices, const Core::Array< Vector3f > &normals) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:32: warning: Member PackedVertex(const Vector4ub &c, const Vector3f &n, const Vector3f &v) (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:38: warning: Member colorOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:39: warning: Member normalOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:40: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:27: warning: Member color (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:28: warning: Member normal (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:29: warning: Member vertex (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:30: warning: Member padding[4] (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:37: warning: Member PLYVisitor(const Camera &camera) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:40: warning: Member begin() (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:41: warning: Member end() (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:47: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:48: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:49: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:50: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:52: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:53: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:54: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:55: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:56: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:57: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:59: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:60: warning: Member camera() const (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:62: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:63: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/plyvisitor.h:64: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:30: warning: Member Point(const Vector3f &p, const Vector3ub &c, size_t i) (function) of struct Avogadro::Rendering::Point is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:33: warning: Member pos (variable) of struct Avogadro::Rendering::Point is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:34: warning: Member color (variable) of struct Avogadro::Rendering::Point is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:35: warning: Member id (variable) of struct Avogadro::Rendering::Point is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:29: warning: Member POVRayVisitor(const Camera &camera) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:32: warning: Member begin() (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:33: warning: Member end() (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:39: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:40: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:41: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:42: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:43: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:44: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:45: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:46: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:47: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:48: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:49: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:51: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:52: warning: Member camera() const (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:54: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:55: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/povrayvisitor.h:56: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:58: warning: Member operator==(const Identifier &other) const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:64: warning: Member operator!=(const Identifier &other) const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:69: warning: Member isValid() const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:71: warning: Member molecule (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:72: warning: Member type (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:73: warning: Member index (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:38: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:41: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:35: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/scene.h:108: warning: Member rootNode() const (function) of class Avogadro::Rendering::Scene is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.h:37: warning: Member Shader(Type type=Unknown, const std::string &source="") (function) of class Avogadro::Rendering::Shader is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.h:70: warning: Member m_type (variable) of class Avogadro::Rendering::Shader is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.h:71: warning: Member m_handle (variable) of class Avogadro::Rendering::Shader is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.h:72: warning: Member m_dirty (variable) of class Avogadro::Rendering::Shader is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.h:74: warning: Member m_source (variable) of class Avogadro::Rendering::Shader is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shader.h:75: warning: Member m_error (variable) of class Avogadro::Rendering::Shader is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:23: warning: Member vertexShader (variable) of struct Avogadro::Rendering::ShaderInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:24: warning: Member fragmentShader (variable) of struct Avogadro::Rendering::ShaderInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/curvegeometry.h:25: warning: Member program (variable) of struct Avogadro::Rendering::ShaderInfo is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:147: warning: Member setUniformValue(const std::string &name, const Eigen::Matrix4f &matrix) (function) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:156: warning: Member setAttributeArrayInternal(const std::string &name, void *buffer, Avogadro::Type type, int tupleSize, NormalizeOption normalize) (function) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:159: warning: Member m_handle (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:160: warning: Member m_vertexShader (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:161: warning: Member m_fragmentShader (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:163: warning: Member m_linked (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:165: warning: Member m_error (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:167: warning: Member m_attributes (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:169: warning: Member m_textureUnitBindings (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/shaderprogram.h:170: warning: Member m_boundTextureUnits (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/solidpipeline.h:53: warning: Member setAoEnabled(bool enabled) (function) of class Avogadro::Rendering::SolidPipeline is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/solidpipeline.h:59: warning: Member setAoStrength(float strength) (function) of class Avogadro::Rendering::SolidPipeline is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/solidpipeline.h:65: warning: Member setEdEnabled(bool enabled) (function) of class Avogadro::Rendering::SolidPipeline is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/solidpipeline.h:75: warning: Member setEdStrength(float strength) (function) of class Avogadro::Rendering::SolidPipeline is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:95: warning: Member Sphere(const Vector3f &position_, float radius_, Primitive::Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Sphere is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:101: warning: Member position() const (function) of class Avogadro::Rendering::Sphere is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:102: warning: Member setPosition(const Vector3f &pos) (function) of class Avogadro::Rendering::Sphere is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:104: warning: Member radius() const (function) of class Avogadro::Rendering::Sphere is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:105: warning: Member setRadius(float r) (function) of class Avogadro::Rendering::Sphere is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h:19: warning: Member SphereColor(Vector3f centre, float r, Vector3ub c) (function) of struct Avogadro::Rendering::SphereColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h:22: warning: Member center (variable) of struct Avogadro::Rendering::SphereColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h:23: warning: Member radius (variable) of struct Avogadro::Rendering::SphereColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h:24: warning: Member color (variable) of struct Avogadro::Rendering::SphereColor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h:43: warning: Member SphereGeometry(const SphereGeometry &other) (function) of class Avogadro::Rendering::SphereGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h:46: warning: Member operator=(SphereGeometry) (function) of class Avogadro::Rendering::SphereGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/spheregeometry.h:101: warning: Member spheres() const (function) of class Avogadro::Rendering::SphereGeometry is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:60: warning: Member TextProperties(const TextProperties &other) (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:63: warning: Member operator=(TextProperties other) (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:64: warning: Member swap(TextProperties &other) (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:66: warning: Member operator==(const TextProperties &other) const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:67: warning: Member operator!=(const TextProperties &other) const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:76: warning: Member pixelHeight() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:83: warning: Member hAlign() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:90: warning: Member vAlign() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:102: warning: Member rotationDegreesCW() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:109: warning: Member fontFamily() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:116: warning: Member fontStyles() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:123: warning: Member bold() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:130: warning: Member italic() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/textproperties.h:137: warning: Member underline() const (function) of class Avogadro::Rendering::TextProperties is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.h:113: warning: Member minFilter() const (function) of class Avogadro::Rendering::Texture2D is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.h:114: warning: Member setMagFilter(FilterOption opt) (function) of class Avogadro::Rendering::Texture2D is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.h:115: warning: Member magFilter() const (function) of class Avogadro::Rendering::Texture2D is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.h:157: warning: Member release() const (function) of class Avogadro::Rendering::Texture2D is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/texture2d.h:159: warning: Member error() const (function) of class Avogadro::Rendering::Texture2D is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/transformnode.h:25: warning: Member TransformNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::TransformNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:43: warning: Member GroupNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:96: warning: Member children() const (function) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:28: warning: Member NodeType (enumeration) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:109: warning: Member clear(NodeType type) (function) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:110: warning: Member m_children (variable) of class Avogadro::Rendering::GroupNode is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:47: warning: Member visit(GroupNode &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:48: warning: Member visit(GeometryNode &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:49: warning: Member visit(Drawable &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:50: warning: Member visit(SphereGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:52: warning: Member visit(CurveGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:53: warning: Member visit(CylinderGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:54: warning: Member visit(MeshGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:55: warning: Member visit(TextLabel2D &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:56: warning: Member visit(TextLabel3D &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/visitor.h:57: warning: Member visit(LineStripGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:29: warning: Member VRMLVisitor(const Camera &camera) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:32: warning: Member begin() (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:33: warning: Member end() (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:39: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:40: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:41: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:42: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:43: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:44: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:45: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:46: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:47: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:48: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:49: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:51: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:52: warning: Member camera() const (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:54: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:55: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/vrmlvisitor.h:56: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartdialog.h:19: warning: Member ChartDialog(QWidget *p=nullptr) (function) of class Avogadro::VTK::ChartDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartdialog.h:22: warning: Member chartWidget() (function) of class Avogadro::VTK::ChartDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartdialog.h:24: warning: Member sizeHint() const override (function) of class Avogadro::VTK::ChartDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartdialog.h:25: warning: Member minimumSizeHint() const override (function) of class Avogadro::VTK::ChartDialog is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:34: warning: Member Axis (enumeration) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:31: warning: Member ChartWidget(QWidget *p=nullptr) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:40: warning: Member addPlot(const std::vector< float > &x, const std::vector< float > &y, const color4ub &color=color4ub{ 0, 0, 0, 255 }) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:43: warning: Member addSeries(const std::vector< float > &y, const color4ub &color=color4ub{ 0, 0, 0, 255 }) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:46: warning: Member addPlots(const std::vector< std::vector< float > > &plotData, const color4ub &color=color4ub{ 0, 0, 0, 255 }) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:49: warning: Member clearPlots() (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:51: warning: Member setXAxisTitle(const std::string &title) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:53: warning: Member setYAxisTitle(const std::string &title) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:55: warning: Member setTickLabels(Axis a, const std::vector< float > &tickPositions, const std::vector< std::string > &tickLabels) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:58: warning: Member setAxisLimits(Axis a, float min, float max) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:59: warning: Member setXAxisLimits(float min, float max) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:60: warning: Member setYAxisLimits(float min, float max) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:62: warning: Member setFontSize(int size=14) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:63: warning: Member setLineWidth(float width=1.0) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/chartwidget.h:65: warning: Member setAxisLogScale(Axis a, bool logScale) (function) of class Avogadro::VTK::ChartWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/qvtkwidget.h:19: warning: Member QVTKWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::QVTKWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/vtkglwidget.h:43: warning: Member vtkGLWidget(QWidget *p=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::vtkGLWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/qvtkwidget.h:19: warning: Member QVTKWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::QVTKWidget is not documented. /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/atom.h:44: warning: explicit link request to 'AtomType' could not be resolved Avogadro::Rendering::GLRenderVisitor... Generating docs for compound Avogadro::Rendering::GroupNode... Generating docs for nested compound Avogadro::Rendering::GroupNode::NodeInfo... Generating docs for compound Avogadro::Rendering::Identifier... Generating docs for compound Avogadro::Rendering::Line... Generating docs for compound Avogadro::Rendering::LineStripGeometry... Generating docs for nested compound Avogadro::Rendering::LineStripGeometry::PackedVertex... Generating docs for compound Avogadro::Rendering::MeshGeometry... Generating docs for nested compound Avogadro::Rendering::MeshGeometry::PackedVertex... Generating docs for compound Avogadro::Rendering::Node... Generating docs for compound Avogadro::Rendering::PLYVisitor... Generating docs for compound Avogadro::Rendering::Point... Generating docs for compound Avogadro::Rendering::POVRayVisitor... Generating docs for compound Avogadro::Rendering::Primitive... Generating docs for nested compound Avogadro::Rendering::Primitive::Identifier... Generating docs for compound Avogadro::Rendering::Quad... Generating docs for compound Avogadro::Rendering::QuadOutline... Generating docs for compound Avogadro::Rendering::Scene... Generating docs for compound Avogadro::Rendering::Shader... Generating docs for compound Avogadro::Rendering::ShaderInfo... Generating docs for compound Avogadro::Rendering::ShaderProgram... Generating docs for compound Avogadro::Rendering::SolidPipeline... Generating docs for compound Avogadro::Rendering::Sphere... Generating docs for compound Avogadro::Rendering::SphereColor... Generating docs for compound Avogadro::Rendering::SphereGeometry... Generating docs for compound Avogadro::Rendering::TextLabel2D... Generating docs for compound Avogadro::Rendering::TextLabel3D... Generating docs for compound Avogadro::Rendering::TextLabelBase... Generating docs for compound Avogadro::Rendering::TextProperties... Generating docs for compound Avogadro::Rendering::TextRenderStrategy... Generating docs for compound Avogadro::Rendering::Texture2D... Generating docs for compound Avogadro::Rendering::TransformNode... Generating docs for compound Avogadro::Rendering::Visitor... Generating docs for compound Avogadro::Rendering::VolumeGeometry... Generating docs for compound Avogadro::Rendering::VRMLVisitor... Generating docs for compound Avogadro::VTK::ChartDialog... Generating docs for compound Avogadro::VTK::ChartWidget... Generating docs for compound Avogadro::VTK::QVTKWidget... Generating docs for compound Avogadro::VTK::vtkGLWidget... Generating graph info page... Generating directory documentation... Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class Avogadro::QtOpenGL::ActiveObjects Generating XML output for class Avogadro::Rendering::AmbientOcclusionSphereGeometry Generating XML output for class Avogadro::Core::AngleIterator Generating XML output for class Avogadro::Rendering::ArcSector Generating XML output for class Avogadro::Rendering::ArcStrip Generating XML output for class Avogadro::Core::Array Generating XML output for class Avogadro::Core::internal::ArrayRefContainer Generating XML output for class Avogadro::Core::ArraySet Generating XML output for class Avogadro::Rendering::ArrowGeometry Generating XML output for class Avogadro::Core::Atom Generating XML output for class Avogadro::Core::AtomTemplate Generating XML output for class Avogadro::Core::AtomTyper Generating XML output for class Avogadro::Core::AtomUtilities Generating XML output for class Avogadro::Core::AvoSpglib Generating XML output for class Avogadro::/build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/bond.h:20: warning: explicit link request to 'BondType' could not be resolved /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemodel.h:96: warning: argument 'array' of command @param is not found in the argument list of ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/chargemodel.h:96: warning: The following parameter of Avogadro::Calc::ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const is not documented: parameter 'points' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/client.h:126: warning: Unsupported xml/html tag found /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h:51: warning: argument 'custom' of command @param is not found in the argument list of ColorButton::setDialogTitle(const QString title="") /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/colorbutton.h:51: warning: The following parameter of Avogadro::QtGui::ColorButton::setDialogTitle(const QString title="") is not documented: parameter 'title' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/coordinateset.h:98: warning: Found unknown command '\index' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:50: warning: The following parameter of Avogadro::Core::CrystalTools::rotateToStandardOrientation(Molecule &molecule, Options opts=None) is not documented: parameter 'molecule' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:65: warning: The following parameters of Avogadro::Core::CrystalTools::setVolume(Molecule &molecule, Real newVolume, Options opts=None) are not documented: parameter 'molecule' parameter 'newVolume' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:75: warning: The following parameter of Avogadro::Core::CrystalTools::niggliReduce(Molecule &molecule, Options opts=None) is not documented: parameter 'molecule' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:97: warning: The following parameter of Avogadro::Core::CrystalTools::buildSupercell(Molecule &molecule, unsigned int a, unsigned int b, unsigned int c) is not documented: parameter 'molecule' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/crystaltools.h:109: warning: The following parameters of Avogadro::Core::CrystalTools::setCellMatrix(Molecule &molecule, const Matrix3 &newCellColMatrix, Options opt=None) are not documented: parameter 'molecule' parameter 'newCellColMatrix' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/cube.h:194: warning: The following parameter of Avogadro::Core::Cube::setValue(unsigned int i, float value) is not documented: parameter 'value' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'color' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/fileformatdialog.h:144: warning: The following parameter of Avogadro::QtGui::FileFormatDialog::selectFileFormat(QWidget *parentWidget, const std::vector< const Io::FileFormat * > &ffs, const QString &caption, const QString &prompt, const QString &settingsKey=QString(), const QString &formatPrefix=QString()) is not documented: parameter 'formatPrefix' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformatmanager.h:319: warning: argument 'fmap' of command @param is not found in the argument list of FileFormatManager::filteredFormatFromFormatVector(FileFormat::Operations filter, const FormatIdVector &fvec) const /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/fileformatmanager.h:319: warning: The following parameter of Avogadro::Io::FileFormatManager::filteredFormatFromFormatVector(FileFormat::Operations filter, const FormatIdVector &fvec) const is not documented: parameter 'fvec' QtGui::BackgroundFileFormat Generating XML output for class Avogadro::Core::BasisSet Generating XML output for class Avogadro::MoleQueue::BatchJob Generating XML output for class Avogadro::Rendering::BezierGeometry Generating XML output for class Avogadro::Core::Bond Generating XML output for class Avogadro::Core::BondTemplate Generating XML output for class Avogadro::Rendering::BSplineGeometry Generating XML output for class Avogadro::Rendering::BufferObject Generating XML output for class Avogadro::Rendering::Camera Generating XML output for class Avogadro::Rendering::Cartoon Generating XML output for class Avogadro::Io::CaseInsensitiveComparator Generating XML output for class Avogadro::Calc::ChargeManager Generating XML output for class Avogadro::Calc::ChargeModel Generating XML output for class Avogadro::VTK::ChartDialog Generating XML output for class Avogadro::VTK::ChartWidget Generating XML output for class Avogadro::Io::CjsonFormat Generating XML output for class Avogadro::MoleQueue::Client Generating XML output for class Avogadro::Io::CmlFormat Generating XML output for class Avogadro::Io::CMsgPackFormat Generating XML output for class Avogadro::Core::Color3f Generating XML output for class Avogadro::QtGui::ColorButton Generating XML output for class Avogadro::Rendering::ColorNormalVertex Generating XML output for class Avogadro::Rendering::ColorTextureVertex Generating XML output for class Avogadro::QtGui::ContainerWidget Generating XML output for class Avogadro::Core::CoordinateBlockGenerator Generating XML output for class Avogadro::Core::CoordinateSet Generating XML output for class Avogadro::Core::CrystalTools Generating XML output for class Avogadro::Core::Cube Generating XML output for class Avogadro::Rendering::CurveGeometry Generating XML output for class Avogadro::QtGui::CustomElementDialog Generating XML output for class Avogadro::Rendering::Cylinder Generating XML output for class Avogadro::Rendering::CylinderColor Generating XML output for class Avogadro::Rendering::CylinderGeometry Generating XML output for class Avogadro::Rendering::DashedLineGeometry Generating XML output for class Avogadro::Io::DcdFormat Generating XML output for class Avogadro::Calc::DefaultModel Generating XML output for class Avogadro::Core::DihedralIterator Generating XML output for class Avogadro::Rendering::Drawable Generating XML output for class Avogadro::Rendering::EigenData Generating XML output for class Avogadro::QtGui::ElementDetail Generating XML output for class Avogadro::QtGui::ElementItem Generating XML output for class Avogadro::Core::Elements Generating XML output for class Avogadro::QtGui::ElementTranslator Generating XML output for class Avogadro::Calc::EnergyCalculator Generating XML output for class Avogadro::Calc::EnergyManager Generating XML output for class Avogadro::QtGui::ExtensionPlugin Generating XML output for class Avogadro::QtGui::ExtensionPluginFactory Generating XML output for class Avogadro::QtGui::FileBrowseWidget Generating XML output for class Avogadro::Io::FileFormat Generating XML output for class Avogadro::QtGui::FileFormatDialog Generating XML output for class Avogadro::Io::FileFormatManager Generating XML output for class Avogadro::Frustrum Generating XML output for class Avogadro::QuantumIO::GamessukOut Generating XML output for class Avogadro::QuantumIO::GAMESSUSOutput Generating XML output for class Avogadro::QuantumIO::GaussianCube Generating XML output for class Avogadro::QuantumIO::GaussianFchk Generating XML output for class Avogadro::Core::GaussianSet Generating XML output for class Avogadro::Core::GaussianSetTools Generating XML output for class Avogadro::QtGui::GenericHighlighter Generating XML output for class Avogadro::QuantumIO::GenericOutput Generating XML output for class Avogadro::Rendering::GeometryNode Generating XML output for class Avogadro::Rendering::GeometryVisitor Generating XML output for class Avogadro::Rendering::GLRenderer Generating XML output for class Avogadro::Rendering::GLRenderVisitor Generating XML output for class Avogadro::QtOpenGL::GLWidget Genera/build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/groupnode.h:54: warning: The following parameter of Avogadro::Rendering::GroupNode::addChild(Node *node, NodeType ui=NodeType::GEOMETRY) is not documented: parameter 'ui' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/hdf5dataformat.h:299: warning: Found unknown command '@data' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/hydrogentools.h:77: warning: The following parameters of Avogadro::QtGui::HydrogenTools::generateNewHydrogenPositions(const RWAtom &atom, int numberOfHydrogens, std::vector< Vector3 > &positions) are not documented: parameter 'atom' parameter 'numberOfHydrogens' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/inputgenerator.h:454: warning: The following parameter of Avogadro::MoleQueue::InputGenerator::InputGenerator(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/interfacescript.h:452: warning: The following parameter of Avogadro::QtGui::InterfaceScript::InterfaceScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/linestripgeometry.h:61: warning: argument 'color' of command @param is not found in the argument list of LineStripGeometry::addLineStrip(const Core::Array< Vector3f > &vertices, float lineWidth) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:52: warning: The following parameters of Avogadro::QtGui::MeshGenerator::MeshGenerator(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false, QObject *parent=nullptr) are not documented: parameter 'reverse' parameter 'parent' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:68: warning: The following parameter of Avogadro::QtGui::MeshGenerator::initialize(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false) is not documented: parameter 'reverse' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/meshgenerator.h:125: warning: The following parameter of Avogadro::QtGui::MeshGenerator::offset(float val1, float val2) is not documented: parameter 'val2' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/meshgeometry.h:67: warning: argument 'colors' of command @param is not found in the argument list of MeshGeometry::addVertices(const Core::Array< Vector3f > &vertices, const Core::Array< Vector3f > &normals) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:173: warning: argument 'a' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:173: warning: argument 'b' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/molecule.h:173: warning: The following parameters of Avogadro::QtGui::Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) are not documented: parameter 'atomId1' parameter 'atomId2' ting XML output for class Avogadro::Core::Graph Generating XML output for class Avogadro::Io::GromacsFormat Generating XML output for class Avogadro::Rendering::GroupNode Generating XML output for class Avogadro::QuantumIO::GUKBasisSet Generating XML output for class Avogadro::Core::hBondRecord Generating XML output for class Avogadro::Io::Hdf5DataFormat Generating XML output for class Avogadro::Core::ArraySet::Holder Generating XML output for class Avogadro::QtGui::HydrogenTools Generating XML output for class Avogadro::Rendering::Identifier Generating XML output for class Avogadro::Rendering::Primitive::Identifier Generating XML output for class Avogadro::MoleQueue::InputGenerator Generating XML output for class Avogadro::MoleQueue::InputGeneratorDialog Generating XML output for class Avogadro::MoleQueue::InputGeneratorWidget Generating XML output for class Avogadro::QtGui::InsertFragmentDialog Generating XML output for class Avogadro::QtGui::InterfaceScript Generating XML output for class Avogadro::QtGui::InterfaceWidget Generating XML output for class Avogadro::MoleQueue::JobObject Generating XML output for class Avogadro::MoleQueue::JsonRpcClient Generating XML output for class Avogadro::QtGui::JsonWidget Generating XML output for class Avogadro::Io::LammpsDataFormat Generating XML output for class Avogadro::Io::LammpsTrajectoryFormat Generating XML output for class Avogadro::Core::Layer Generating XML output for class Avogadro::Core::LayerData Generating XML output for class Avogadro::Core::LayerManager Generating XML output for class Avogadro::QtGui::LayerModel Generating XML output for class Avogadro::Calc::LennardJones Generating XML output for class Avogadro::Rendering::Line Generating XML output for class Avogadro::Rendering::LineStripGeometry Generating XML output for class Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare Generating XML output for class Avogadro::Io::MdlFormat Generating XML output for class Avogadro::Core::Mesh Generating XML output for class Avogadro::QtGui::MeshGenerator Generating XML output for class Avogadro::Rendering::MeshGeometry Generating XML output for class Avogadro::Io::MMTFFormat Generating XML output for class Avogadro::QuantumIO::MoldenFile Generating XML output for class Avogadro::Core::Molecule Generating XML output for class Avogadro::QtGui::Molecule Generating XML output for class Avogadro::Core::MoleculeInfo Generating XML output for class Avogadro::QtGui::MoleculeModel Generating XML output for class Avogadro::QtGui::MoleculeSystem Generating XML output for class Avogadro::MoleQueue::MoleQueueDialog Generating XML output for class Avogadro::MoleQueue::MoleQueueManager Generating XML output for class Avogadro::MoleQueue::MoleQueueQueueListModel Generating XML output for class Avogadro::MoleQueue::MoleQueueWidget Generating XML output for class Avogadro::QuantumIO::MopacAux Generating XML output for class Avogadro::QtGui::MultiViewWidget Generating XML output for class Avogadro::Core::Mutex Generating XML output for class Avogadro::Core::NameAtomTyper Generating XML output for class Avogadro::Core::NeighborPerceiver Generating XML output for class Avogadro::Rendering::Node Generating XML output for class Avogadro::Rendering::GroupNode::NodeInfo Generating XML output for class Avogadro::QuantumIO::NWChemJson Generating XML output for class Avogadro::QuantumIO::NWChemLog Generating XML output for class Avogadro::QuantumIO::ORCAOutput Generating XML output for class Avogadro::Io::OutcarFormat Generating XML output for class Avogadro::Rendering::DashedLineGeometry::PackedVertex Generating XML output for class Avogadro::Rendering::LineStripGeometry::PackedVertex Generating XML output for class Avogadro::Rendering::MeshGeometry::PackedVertex Generating XML output for class Avogadro::Io::PdbFormat Generating XML output for class Avogadro::QtGui::PeriodicTableScene Generating XML output for class Avogadro::QtGui::PeriodicTableView Generating XML output for class Avogadro::QtGui::PersistentAtom Generating XML output for class Avogadro::QtGui::PersistentBond Generating XML/build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:31: warning: argument 'scriptFilePath_' of command @param is not found in the argument list of PythonScript::PythonScript(QObject *parent_=nullptr) /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(QObject *parent_=nullptr) is not documented: parameter 'parent_' /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/rwmolecule.h:628: warning: The following parameter of Avogadro::QtGui::RWMolecule::setForceVector(Index atomId, const Vector3 &pos, const QString &undoText=QStringLiteral("Change Force Vectors")) is not documented: parameter 'atomId' output for class Avogadro::Core::ArraySet::PlaceHolder Generating XML output for class Avogadro::QtGui::PluginLayerManager Generating XML output for class Avogadro::Rendering::PLYVisitor Generating XML output for class Avogadro::Rendering::Point Generating XML output for class Avogadro::Io::PoscarFormat Generating XML output for class Avogadro::Rendering::POVRayVisitor Generating XML output for class Avogadro::Rendering::Primitive Generating XML output for class Avogadro::QtGui::PythonScript Generating XML output for class Avogadro::QtOpenGL::QtTextRenderStrategy Generating XML output for class Avogadro::Rendering::Quad Generating XML output for class Avogadro::Rendering::QuadOutline Generating XML output for class Avogadro::VTK::QVTKWidget Generating XML output for class Avogadro::MoleQueue::BatchJob::Request Generating XML output for class Avogadro::Core::Residue Generating XML output for class Avogadro::Core::ResidueData Generating XML output for class Avogadro::Core::RingPerceiver Generating XML output for class Avogadro::QtGui::GenericHighlighter::Rule Generating XML output for class Avogadro::QtGui::RWAtom Generating XML output for class Avogadro::QtGui::RWBond Generating XML output for class Avogadro::QtGui::RWLayerManager Generating XML output for class Avogadro::QtGui::RWMolecule Generating XML output for class Avogadro::Rendering::Scene Generating XML output for class Avogadro::QtGui::ScenePlugin Generating XML output for class Avogadro::QtGui::ScenePluginFactory Generating XML output for class Avogadro::QtGui::ScenePluginModel Generating XML output for class Avogadro::QtGui::ScriptLoader Generating XML output for class Avogadro::Core::SecondaryStructureAssigner Generating XML output for class Avogadro::Rendering::Shader Generating XML output for class Avogadro::Rendering::ShaderInfo Generating XML output for class Avogadro::Rendering::ShaderProgram Generating XML output for class Avogadro::Core::SharedMutex Generating XML output for class Avogadro::Core::SlaterSet Generating XML output for class Avogadro::Core::SlaterSetTools Generating XML output for class Avogadro::Rendering::SolidPipeline Generating XML output for class Avogadro::QtGui::SortFilterTreeProxyModel Generating XML output for class Avogadro::Core::SpaceGroups Generating XML output for class Avogadro::Rendering::Sphere Generating XML output for class Avogadro::Rendering::SphereColor Generating XML output for class Avogadro::Rendering::SphereGeometry Generating XML output for class Avogadro::Core::SymbolAtomTyper Generating XML output for class Avogadro::Rendering::TextLabel2D Generating XML output for class Avogadro::Rendering::TextLabel3D Generating XML output for class Avogadro::Rendering::TextLabelBase Generating XML output for class Avogadro::Rendering::TextProperties Generating XML output for class Avogadro::Rendering::TextRenderStrategy Generating XML output for class Avogadro::Rendering::Texture2D Generating XML output for class Avogadro::QtGui::ToolPlugin Generating XML output for class Avogadro::QtGui::ToolPluginFactory Generating XML output for class Avogadro::Rendering::TransformNode Generating XML output for class Avogadro::Io::TrrFormat Generating XML output for class Avogadro::Io::TurbomoleFormat Generating XML output for class Avogadro::TypeTraits Generating XML output for class Avogadro::TypeTraits< char > Generating XML output for class Avogadro::TypeTraits< double > Generating XML output for class Avogadro::TypeTraits< float > Generating XML output for class Avogadro::TypeTraits< int > Generating XML output for class Avogadro::TypeTraits< short > Generating XML output for class Avogadro::TypeTraits< unsigned char > Generating XML output for class Avogadro::TypeTraits< unsigned int > Generating XML output for class Avogadro::TypeTraits< unsigned short > Generating XML output for class Avogadro::QtGui::RWMolecule::UndoCommand Generating XML output for class Avogadro::Core::UnitCell Generating XML output for class Avogadro::Core::Variant Generating XML output for class Avogadro::Core::VariantMap Generating XML output for class Avogadro::QtGui::ViewFactory Generating XML output for class Avogadro::Rendering::Visitor Generating XML output for class Avogadro::Rendering::VolumeGeometry Generating XML output for class Avogadro::Rendering::VRMLVisitor Generating XML output for class vtkAvogadroActor Generating XML output for class Avogadro::VTK::vtkGLWidget Generating XML output for class Avogadro::Io::XyzFormat Generating XML output for namespace Avogadro Generating XML output for namespace Avogadro::Calc Generating XML output for namespace Avogadro::Core Generating XML output for namespace Avogadro::Core::internal Generating XML output for namespace Avogadro::Io Generating XML output for namespace Avogadro::MoleQueue Generating XML output for namespace Avogadro::MoleQueue::Ui Generating XML output for namespace Avogadro::QtGui Generating XML output for namespace Avogadro::QtGui::@112 Generating XML output for namespace Avogadro::QtGui::Ui Generating XML output for namespace Avogadro::QtGui::Utilities Generating XML output for namespace Avogadro::QtOpenGL Generating XML output for namespace Avogadro::QtPlugins Generating XML output for namespace Avogadro::QuantumIO Generating XML output for namespace Avogadro::Rendering Generating XML output for namespace Avogadro::VTK Generating XML output for namespace cppoptlib Generating XML output for namespace QtPlugins Generating XML output for namespace std Generating XML output for file chargemanager.h Generating XML output for file chargemodel.h Generating XML output for file defaultmodel.h Generating XML output for file energycalculator.h Generating XML output for file energymanager.h Generating XML output for file lennardjones.h Generating XML output for file lennardjonesdata.h Generating XML output for file angleiterator.h Generating XML output for file angletools.h Generating XML output for file array.h Generating XML output for file atom.h Generating XML output for file atomtyper-inline.h Generating XML output for file atomtyper.h Generating XML output for file atomutilities.h Generating XML output for file avogadrocore.h Generating XML output for file avospglib.h Generating XML output for file basisset.h Generating XML output for file bond.h Generating XML output for file color3f.h Generating XML output for file coordinateblockgenerator.h Generating XML output for file coordinateset.h Generating XML output for file crystaltools.h Generating XML output for file cube.h Generating XML output for file dihedraliterator.h Generating XML output for file elementdata.h Generating XML output for file elements.h Generating XML output for file gaussianset.h Generating XML output for file gaussiansettools.h Generating XML output for file graph.h Generating XML output for file layer.h Generating XML output for file layermanager.h Generating XML output for file matrix.h Generating XML output for file mdlvalence_p.h Generating XML output for file mesh.h Generating XML output for file mutex.h Generating XML output for file nameatomtyper.h Generating XML output for file neighborperceiver.h Generating XML output for file residue.h Generating XML output for file residuecolors.h Generating XML output for file residuedata.h Generating XML output for file ringperceiver.h Generating XML output for file secondarystructure.h Generating XML output for file sharedmutex.h Generating XML output for file slaterset.h Generating XML output for file slatersettools.h Generating XML output for file spacegroupdata.h Generating XML output for file spacegroups.h Generating XML output for file symbolatomtyper.h Generating XML output for file types.h Generating XML output for file unitcell.h Generating XML output for file variant-inline.h Generating XML output for file variant.h Generating XML output for file variantmap.h Generating XML output for file vector.h Generating XML output for file cjsonformat.h Generating XML output for file cmlformat.h Generating XML output for file cmsgpackformat.h Generating XML output for file dcdformat.h Generating XML output for file fileformat.h Generating XML output for file fileformatmanager.h Generating XML output for file gromacsformat.h Generating XML output for file hdf5dataformat.h Generating XML output for file lammpsformat.h Generating XML output for file mdlformat.h Generating XML output for file mmtfformat.h Generating XML output for file pdbformat.h Generating XML output for file trrformat.h Generating XML output for file turbomoleformat.h Generating XML output for file vaspformat.h Generating XML output for file xyzformat.h Generating XML output for file batchjob.h Generating XML output for file client.h Generating XML output for file jobobject.h Generating XML output for file jsonrpcclient.h Generating XML output for file inputgenerator.h Generating XML output for file inputgeneratordialog.h Generating XML output for file inputgeneratorwidget.h Generating XML output for file molequeuedialog.h Generating XML output for file molequeuemanager.h Generating XML output for file molequeuequeuelistmodel.h Generating XML output for file molequeuewidget.h Generating XML output for file backgroundfileformat.h Generating XML output for file colorbutton.h Generating XML output for file containerwidget.h Generating XML output for file customelementdialog.h Generating XML output for file elementdetail_p.h Generating XML output for file elementitem_p.h Generating XML output for file elementtranslator.h Generating XML output for file extensionplugin.h Generating XML output for file filebrowsewidget.h Generating XML output for file fileformatdialog.h Generating XML output for file generichighlighter.h Generating XML output for file hydrogentools.h Generating XML output for file insertfragmentdialog.h Generating XML output for file interfacescript.h Generating XML output for file interfacewidget.h Generating XML output for file jsonwidget.h Generating XML output for file layermodel.h Generating XML output for file meshgenerator.h Generating XML output for file core/molecule.h Generating XML output for file qtgui/molecule.h Generating XML output for file moleculemodel.h Generating XML output for file multiviewwidget.h Generating XML output for file periodictablescene_p.h Generating XML output for file periodictableview.h Generating XML output for file persistentatom.h Generating XML output for file persistentbond.h Generating XML output for file pluginlayermanager.h Generating XML output for file pythonscript.h Generating XML output for file rwlayermanager.h Generating XML output for file rwmolecule.h Generating XML output for file rwmolecule_undo.h Generating XML output for file sceneplugin.h Generating XML output for file scenepluginmodel.h Generating XML output for file scriptloader.h Generating XML output for file sortfiltertreeproxymodel.h Generating XML output for file toolplugin.h Generating XML output for file core/utilities.h Generating XML output for file qtgui/utilities.h Generating XML output for file viewfactory.h Generating XML output for file activeobjects.h Generating XML output for file glwidget.h Generating XML output for file qttextrenderstrategy.h Generating XML output for file gamessukout.h Generating XML output for file gamessus.h Generating XML output for file gaussiancube.h Generating XML output for file gaussianfchk.h Generating XML output for file genericoutput.h Generating XML output for file molden.h Generating XML output for file mopacaux.h Generating XML output for file nwchemjson.h Generating XML output for file nwchemlog.h Generating XML output for file orca.h Generating XML output for file ambientocclusionspheregeometry.h Generating XML output for file arcsector.h Generating XML output for file arcstrip.h Generating XML output for file arrowgeometry.h Generating XML output for file avogadrogl.h Generating XML output for file avogadrorendering.h Generating XML output for file beziergeometry.h Generating XML output for file bsplinegeometry.h Generating XML output for file bufferobject.h Generating XML output for file camera.h Generating XML output for file cartoongeometry.h Generating XML output for file curvegeometry.h Generating XML output for file cylindergeometry.h Generating XML output for file dashedlinegeometry.h Generating XML output for file drawable.h Generating XML output for file geometrynode.h Generating XML output for file geometryvisitor.h Generating XML output for file glrenderer.h Generating XML output for file glrendervisitor.h Generating XML output for file groupnode.h Generating XML output for file linestripgeometry.h Generating XML output for file meshgeometry.h Generating XML output for file node.h Generating XML output for file plyvisitor.h Generating XML output for file povrayvisitor.h Generating XML output for file primitive.h Generating XML output for file quad.h Generating XML output for file quadoutline.h Generating XML output for file scene.h Generating XML output for file shader.h Generating XML output for file shaderprogram.h Generating XML output for file solidpipeline.h Generating XML output for file spheregeometry.h Generating XML output for file textlabel2d.h Generating XML output for file textlabel3d.h Generating XML output for file textlabelbase.h Generating XML output for file textproperties.h Generating XML output for file textrenderstrategy.h Generating XML output for file texture2d.h Generating XML output for file transformnode.h Generating XML output for file visitor.h Generating XML output for file volumegeometry.h Generating XML output for file vrmlvisitor.h Generating XML output for file chartdialog.h Generating XML output for file chartwidget.h Generating XML output for file qvtkwidget.h Generating XML output for file vtkAvogadroActor.h Generating XML output for file vtkglwidget.h Generating XML output for file mainpage.dox Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/calc/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/client/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/core/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/docs/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/io/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/molequeue/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtgui/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/qtopengl/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/quantumio/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/rendering/ Generate XML output for dir /build/reproducible-path/avogadrolibs-1.99.0/avogadro/vtk/ Generating XML output for the main page Running plantuml with JAVA... type lookup cache used 9404/65536 hits=40645 misses=11114 symbol lookup cache used 8577/65536 hits=71620 misses=8577 finished... make[5]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' Built target documentation make[4]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu/CMakeFiles 0 make[3]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[2]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[1]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python3 --buildsystem=cmake dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j6 install DESTDIR=/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/avogadrolibs-1.99.0 -B/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/libgwavi.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/angletools.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/angleiterator.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/array.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/avogadrocore.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/color3f.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/coordinateset.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/matrix.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/types.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/utilities.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/vector.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroCore.so.1.99.0 -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroCore.so.1 -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroCore.so -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/atom.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/atomtyper.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/atomtyper-inline.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/atomutilities.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/basisset.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/bond.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/coordinateblockgenerator.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/crystaltools.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/cube.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/dihedraliterator.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/elements.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/gaussianset.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/gaussiansettools.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/graph.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/layer.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/layermanager.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/mesh.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/molecule.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/mutex.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/nameatomtyper.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/neighborperceiver.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/residue.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/ringperceiver.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/secondarystructure.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/slaterset.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/slatersettools.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/spacegroups.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/symbolatomtyper.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/unitcell.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/variant.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/variant-inline.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/variantmap.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/version.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/core/sharedmutex.h -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroQtOpenGL.so -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/qtopengl/activeobjects.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/qtopengl/glwidget.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/qtopengl/qttextrenderstrategy.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/qtopengl/avogadroqtopenglexport.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroMoleQueue.so.1.99.0 -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroMoleQueue.so.1 -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroMoleQueue.so -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/batchjob.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/inputgenerator.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/inputgeneratordialog.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/inputgeneratorwidget.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/molequeuedialog.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/molequeuemanager.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/molequeuequeuelistmodel.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/molequeuewidget.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/molequeue/avogadromolequeueexport.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/ThreeDMol.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/ApplyColors.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/AlignTool.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/BondCentric.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Bonding.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Cartoons.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Centroid.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/ConfigurePython.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/CopyPaste.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Crystal.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/CrystalScene.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/CustomElements.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Editor.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/FetchPDB.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Focus.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Hydrogens.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/ImportPQR.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/NucleicInput.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Label.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/LabelEditor.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/LammpsInput.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/LineFormatInput.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Manipulator.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/MeasureTool.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Navigator.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/NetworkDatabases.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/OpenBabel.a -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Selection.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/SpaceGroup.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Surfaces.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/TemplateTool.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/README.md -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/LICENSE -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/ASN.zmat -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/NME.zmat -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/VAL.zmat -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/TYR.zmat -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/LEU.zmat -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/ASP.zmat -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/PHE.zmat -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/PYL.zmat -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/amino/AIB.zmat -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/vinyls -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/vinyls/vinyl-pyridine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/vinyls/vinyl-chloride.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/vinyls/vinyl-acetate.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/vinyls/vinyl-ether.smi -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/silanes/dimethylsilane.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/silanes/methyl-phenyl-silane.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/silanes/dimethylsilane.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/polymers/silanes/methyl-phenyl-silane.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/bicyclics -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/bicyclics/norbornyl.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/bicyclics/norbornyl.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/bicyclics/adamantyl.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/bicyclics/adamantyl.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/bicyclics/groups.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/oxygen -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/oxygen/ynone.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/oxygen/anhydride.cjson -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/oxygen/acid_chloride.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/oxygen/ketone.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/oxygen/epoxide.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/oxygen/groups.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/propyl.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/hexyl.cjson -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/isopentyl.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/neopentyl.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/t-butyl.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/hexyl.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/butyl.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/heptyl.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkanes/groups.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/cycloalkanes -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/cycloalkanes/cyclopropane.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/cycloalkanes/cyclobutane.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/cycloalkanes/cyclohexane.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/cycloalkanes/cyclopentane.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/cycloalkanes/cyclodecane.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/cycloalkanes/cyclobutane.png -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/cysteine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/histidine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/pyrrolysine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/alanine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/valine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/leucine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/leucine.cjson -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/serine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/pngout.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/methionine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/tyrosine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/arginine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/histidine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/serine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/selenocysteine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/aspartic_acid.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/glutamic_acid.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/glycine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/glutamine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/phenylalanine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/methionine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/arginine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/valine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/asparagine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/selenocysteine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/pyrrolysine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/groups.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/amino_sidechains/isoleucine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/borinic_acid.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/boronic_acid.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/boronic_acid.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/borinic_ester.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/borinic_ester.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/boronic_ester.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/boronic_ester.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/borinic_acid.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/boron/groups.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/phosphorus -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/phosphorus/phosphorothiolate.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/phosphorus/phosphine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/phosphorus/phosphine.png -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/phosphorus/groups.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/butadiene.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/octatetraene.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/hexatriene.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/octatetraene.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/ethylene.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/butadiene.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/hexatriene.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/ethylene.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/alkenes/groups.smi -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitrate.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/hydroxamic_acid.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/dithiocarbamate.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/hydrazine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/amidine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/oxime.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitrosamine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/iminocarbamate.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/dithiocarbamate.cjson -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/cyanate.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/carbamate.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitroso.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitrosamine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/hydroxamic_acid.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitrile.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitrite.cjson -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitrile.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/isocyanate.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/guanidine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/imine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitrite.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitrate.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/formimidamide.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/acetamide.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/iminocarbamate.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/oxime.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/amidine.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/isocyano.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/formimidamide.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitro.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/nitroso.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/imine.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/acetamide.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/cyanate.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/azide.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/azide.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/nitrogen/groups.smi -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/aromatics/mesityl.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/aromatics/phenyl.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/aromatics/anthracene.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/aromatics/coronene.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/aromatics/mesityl.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/aromatics/tetracene.cjson -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/groups/aromatics/phenalene.png -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/fragments/scripts/generate-ligands.py -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Vibrations.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/VRML.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/apbs.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/CoordinateEditor.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Cp2kInput.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Forcefield.a -- Installing: 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Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sc-Scandium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Y-Yttrium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/K-Potassium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Hf-Hafnium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ca-Calcium-alpha.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Y-Yttrium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Gd-Gadolinium.cif -- Installing: 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Np-Neptunium-beta.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Zn-Zinc.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/P-Phosphorus.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Na-Sodium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Np-Neptunium-gamma.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/S8-Sulfur-alpha.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sb-Antimony.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Fe-Iron-delta.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Fe-Iron-gamma.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/C-Graphite.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Si-Silicon.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sn-Tin-alpha.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Pb-Lead.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Kr-Krypton.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/La-Lanthanum.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ag-Silver.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Bi-Bismuth.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/K-Potassium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/I-Iodine.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Dy-Dysprosium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ge-Germanium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Cu-Copper.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Np-Neptunium-beta.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/In-Indium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Yb-Ytterbium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/As-Arsenic.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Pt-Platinum.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sr-Strontium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Hf-Hafnium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/W-Tungsten.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sb-Antimony.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/N-Nitrogen.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sn-Tin-beta.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Mg-Magnesium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ti-Titanium-beta.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Mo-Molybdenum.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Np-Neptunium-alpha.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ar-Argon.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Tm-Thulium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/As-Arsenic.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Au-Gold.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Pr-Praseodymium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sc-Scandium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Re-Rhenium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/As-Arsenolamprite.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Mn-Manganese-gamma.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Al-Aluminum.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Nb-Niobium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ar-Argon.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Tb-Terbium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/S8-Sulfur-beta.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Th-Thorium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Al-Aluminum.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ne-Neon.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Mo-Molybdenum.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/He-Helium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Cd-Cadmium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Kr-Krypton.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Li-Lithium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/S6-Sulfur.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Pd-Palladium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ir-Iridium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sn-Tin-beta.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Se-Selenium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ba-Barium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Sm-Samarium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Mn-Manganese-delta.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Pu-Plutonium-alpha.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Am-Americium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Pu-Plutonium-gamma.png -- Installing: 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Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Br-Bromine.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ac-Actinium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/S8-Sulfur-gamma.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Fe-Iron-beta.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/B-Boron.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Co-Cobalt.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Cs-Cesium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Lu-Lutetium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ac-Actinium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Cr-Chromium.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ag-Silver.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ta-Tantalum.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Ne-Neon.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/Te-Tellurium.cif -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/C-Lonsdaleite.png -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/avogadro2/crystals/elements/S8-Sulfur-beta.png -- 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/build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/ScriptCharges.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/scripts/charges/xtb.py -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/scripts/charges/antechamber.py -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/ScriptFileFormats.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/scripts/formatScripts/zyx.py -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/PluginDownloader.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/BallStick.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/CloseContacts.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Force.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Licorice.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Meshes.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/NonCovalent.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/VanDerWaals.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/Wireframe.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/avogadro2/staticplugins/OverlayAxes.a -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroQtPlugins.so.1.99.0 -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroQtPlugins.so.1 -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/libAvogadroQtPlugins.so -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/qtplugins/pluginmanager.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/qtplugins/pluginfactory.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/qtplugins/avogadrostaticqtplugins.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/include/avogadro/qtplugins/avogadroqtpluginsexport.h -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/python3/dist-packages/avogadro/core.cpython-311-i386-linux-gnu.so -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/python3/dist-packages/avogadro/io.cpython-311-i386-linux-gnu.so -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/python3/dist-packages/avogadro/__init__.py -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/python3/dist-packages/avogadro/cjson.py -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/python3/dist-packages/avogadro/connect.py -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/doc/AvogadroLibs/avogadrolibs/README.md -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/doc/AvogadroLibs/avogadrolibs/CONTRIBUTING.md -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/share/doc/AvogadroLibs/avogadrolibs/LICENSE -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/cmake/avogadrolibs/AvogadroLibsConfig.cmake -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/cmake/avogadrolibs/AvogadroLibsConfigVersion.cmake -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/cmake/avogadrolibs/FindEigen3.cmake -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/cmake/avogadrolibs/Findlibmsym.cmake -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/cmake/avogadrolibs/AvogadroLibsTargets.cmake -- Installing: /build/reproducible-path/avogadrolibs-1.99.0/debian/tmp/usr/lib/i386-linux-gnu/cmake/avogadrolibs/AvogadroLibsTargets-none.cmake make[1]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0/obj-i686-linux-gnu' debian/rules execute_after_dh_auto_install-arch make[1]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0' cp -r obj-i686-linux-gnu/bin debian/tmp/usr make[1]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0' debian/rules execute_after_dh_auto_install-indep make[1]: Entering directory '/build/reproducible-path/avogadrolibs-1.99.0' cp -r obj-i686-linux-gnu/docs/html debian/tmp make[1]: Leaving directory '/build/reproducible-path/avogadrolibs-1.99.0' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installman -O--buildsystem=cmake dh_python3 -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dwz: debian/python3-avogadro/usr/lib/python3/dist-packages/avogadro/core.cpython-311-i386-linux-gnu.so: .debug_info section not present dwz: debian/python3-avogadro/usr/lib/python3/dist-packages/avogadro/io.cpython-311-i386-linux-gnu.so: .debug_info section not present dwz: Too few files for multifile optimization dh_dwz: warning: No dwz multifile created, but not explicitly requested either so ignoring it. dh_dwz: warning: Common issues include no debug information at all (missing -g) and dh_dwz: warning: compressed debug information (#931891). dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libavogadro2-1t64/usr/lib/i386-linux-gnu/libAvogadroRendering.so.1.99.0 was not linked against libGLX.so.0 (it uses none of the library's symbols) dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dpkg-gencontrol: warning: Provides field of package python3-avogadro: substitution variable ${python3:Provides} used, but is not defined dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'avogadro-utils' in '../avogadro-utils_1.99.0-5_i386.deb'. dpkg-deb: building package 'libavogadro-doc' in '../libavogadro-doc_1.99.0-5_all.deb'. dpkg-deb: building package 'libavogadro2-1t64' in '../libavogadro2-1t64_1.99.0-5_i386.deb'. dpkg-deb: building package 'libavogadro-dev' in '../libavogadro-dev_1.99.0-5_i386.deb'. dpkg-deb: building package 'avogadro-utils-dbgsym' in '../avogadro-utils-dbgsym_1.99.0-5_i386.deb'. dpkg-deb: building package 'python3-avogadro' in '../python3-avogadro_1.99.0-5_i386.deb'. dpkg-deb: building package 'libavogadro2-1t64-dbgsym' in '../libavogadro2-1t64-dbgsym_1.99.0-5_i386.deb'. dpkg-deb: building package 'libavogadro-data' in '../libavogadro-data_1.99.0-5_all.deb'. dpkg-genbuildinfo --build=binary -O../avogadrolibs_1.99.0-5_i386.buildinfo dpkg-genchanges --build=binary -O../avogadrolibs_1.99.0-5_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/30109 and its subdirectories I: Current time: Fri May 17 08:01:00 -12 2024 I: pbuilder-time-stamp: 1715976060 Fri May 17 20:01:05 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom08-i386.debian.net. Fri May 17 20:01:05 UTC 2024 I: Preparing to do remote build '2' on infom08-i386.debian.net. Fri May 17 20:20:49 UTC 2024 I: Deleting $TMPDIR on infom08-i386.debian.net. Fri May 17 20:20:49 UTC 2024 I: avogadrolibs_1.99.0-5_i386.changes: Format: 1.8 Date: Wed, 06 Mar 2024 23:38:31 +0100 Source: avogadrolibs Binary: avogadro-utils avogadro-utils-dbgsym libavogadro-data libavogadro-dev libavogadro-doc libavogadro2-1t64 libavogadro2-1t64-dbgsym python3-avogadro Architecture: i386 all Version: 1.99.0-5 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Drew Parsons Description: avogadro-utils - Molecular Graphics and Modelling System (library) libavogadro-data - Molecular Graphics and Modelling System (data files) libavogadro-dev - Molecular Graphics and Modelling System (development files) libavogadro-doc - Molecular Graphics and Modelling System (lib documentation) libavogadro2-1t64 - Molecular Graphics and Modelling System (library) python3-avogadro - Molecular Graphics and Modelling System (Python 3 module) Changes: avogadrolibs (1.99.0-5) unstable; urgency=medium . * debian patch fetch_PDB_error_check_PR1646.patch applies upstream PR1646 to prevent Fetch PDB segfaulting on unknown search terms. Checksums-Sha1: 1e5db77e8a13eaa71db4f63b6cda6553936ff240 800080 avogadro-utils-dbgsym_1.99.0-5_i386.deb 6f0909626ef3bca2e8f877479b2b1b45bcddb429 108852 avogadro-utils_1.99.0-5_i386.deb 9ef9174ed98e6ca7d19cee0ac12ad781ac6075be 16956 avogadrolibs_1.99.0-5_i386.buildinfo 18b6de1b887b1c5426e7ed84a4be84205233afe0 31580616 libavogadro-data_1.99.0-5_all.deb 13d14ba9aa8636d906d8818ac7c48dc8a140758f 56575680 libavogadro-dev_1.99.0-5_i386.deb 7e1ed4f9e3b06dd24904a528667c150a003137c6 598232 libavogadro-doc_1.99.0-5_all.deb c02f57cc5bf1915c8e22c22ae6a3c90be5405caa 65913284 libavogadro2-1t64-dbgsym_1.99.0-5_i386.deb c8b25c552137d3be21de9660ca5610709204f172 2543436 libavogadro2-1t64_1.99.0-5_i386.deb a48d73a391d8c26353d6ac5cbaa3a2e8f900776a 153232 python3-avogadro_1.99.0-5_i386.deb Checksums-Sha256: 6f86ba9f5001d9f8fc967853a7ea4953d1ada367e91ed1e5ee7680e2569c275d 800080 avogadro-utils-dbgsym_1.99.0-5_i386.deb e31bcf07f0f6c0264adc7c63a7d6c77ae32abbca11e93dc0cdaf13bb4189a7a2 108852 avogadro-utils_1.99.0-5_i386.deb 9ca4ed611f6372c017487482cd8dcdeb5fde592e3c69a6d82b2976c9f900e691 16956 avogadrolibs_1.99.0-5_i386.buildinfo 23a2826a81b5f0468b0ded8a6198afe8835e9ac044765902c77ad3806b2bf765 31580616 libavogadro-data_1.99.0-5_all.deb 5422bff6946543659dc04ec7638f527e511e23a8fe30065695f0a028d6ebd076 56575680 libavogadro-dev_1.99.0-5_i386.deb f2659a888b21f58b68c475f89d186223ca1aa55c5ca097edcca034578c043b97 598232 libavogadro-doc_1.99.0-5_all.deb a115cb62637e798145fae363dcbf39f71d3f599b9a0402ac65fc5239182e19c1 65913284 libavogadro2-1t64-dbgsym_1.99.0-5_i386.deb 7254bfe3cfb3e66427af8d54d75c78c3181fc3516de40140e5c747b4c187acd4 2543436 libavogadro2-1t64_1.99.0-5_i386.deb be27bf56b184ba797cf7070c675b92c7a23bb5cf0931222e252756dad6a99e63 153232 python3-avogadro_1.99.0-5_i386.deb Files: f45821fdd558a7a2b174e09c2f13c4e4 800080 debug optional avogadro-utils-dbgsym_1.99.0-5_i386.deb 4ab01729f2507f567bc137ba3e236a39 108852 science optional avogadro-utils_1.99.0-5_i386.deb bfbeef5b48aaf60f48108c7ab0be2174 16956 science optional avogadrolibs_1.99.0-5_i386.buildinfo 66baa0d9187b78e0fb4858364057c762 31580616 libdevel optional libavogadro-data_1.99.0-5_all.deb d1d61cde25e49173c0b369d67cbd87b1 56575680 libs optional libavogadro-dev_1.99.0-5_i386.deb 0b39b99eb08aa0601500cf2e18072bf5 598232 doc optional libavogadro-doc_1.99.0-5_all.deb bdb97c9798d30f5be2042bb134e0ed45 65913284 debug optional libavogadro2-1t64-dbgsym_1.99.0-5_i386.deb f087c82f16934c245058a2e7d0d3bffa 2543436 libs optional libavogadro2-1t64_1.99.0-5_i386.deb 6375821881f8d14f4d22a052e4af6a1c 153232 python optional python3-avogadro_1.99.0-5_i386.deb Fri May 17 20:20:51 UTC 2024 I: diffoscope 266 will be used to compare the two builds: Running as unit: rb-diffoscope-i386_13-19755.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Jz2KCNve/avogadrolibs_1.99.0-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Jz2KCNve/avogadrolibs_1.99.0-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Jz2KCNve/avogadrolibs_1.99.0-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Jz2KCNve/b1/avogadrolibs_1.99.0-5_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.Jz2KCNve/b2/avogadrolibs_1.99.0-5_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 2.132s) 2.132s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 1.742s) 1.742s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 2.519s CPU time consumed: 2.519s Fri May 17 20:20:54 UTC 2024 I: diffoscope 266 found no differences in the changes files, and a .buildinfo file also exists. Fri May 17 20:20:54 UTC 2024 I: avogadrolibs from unstable built successfully and reproducibly on i386. Fri May 17 20:20:56 UTC 2024 I: Submitting .buildinfo files to external archives: Fri May 17 20:20:56 UTC 2024 I: Submitting 20K b1/avogadrolibs_1.99.0-5_i386.buildinfo.asc Fri May 17 20:20:57 UTC 2024 I: Submitting 20K b2/avogadrolibs_1.99.0-5_i386.buildinfo.asc Fri May 17 20:20:57 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri May 17 20:20:57 UTC 2024 I: Done submitting .buildinfo files. Fri May 17 20:20:57 UTC 2024 I: Removing signed avogadrolibs_1.99.0-5_i386.buildinfo.asc files: removed './b1/avogadrolibs_1.99.0-5_i386.buildinfo.asc' removed './b2/avogadrolibs_1.99.0-5_i386.buildinfo.asc'